Basic Information

Gene Symbol
Kdm5
Assembly
GCA_907165205.1
Location
OU015576.1:96902-102982[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-24 8.4e-21 75.4 0.0 2 89 112 195 111 195 0.95
2 2 1.1 6.7e+03 -1.2 0.0 31 80 1226 1274 1212 1281 0.67

Sequence Information

Coding Sequence
ATGGCGACTTCAAAGGAAAAAATGACTGGTATGAAGATATCACCTAGTTGTTCGAAAACAGAAGGGTACAAAATTGAAGCTGATCAACTTTTCAAAGATGAAGGTTTTGAATTCACTGTACCCCCAGAAGTCCCAGTATTTCATCCCACTGAAGAGGAGTTTGCAGACCCCCTTGCATATATTGGAAAAATTCGCCCAATTGCTGAGAACACTGGTATATGCAAGATCAAGCCACCACCTAACTGGCAGCCCCCATTTGCTGTTGATGTAGACAAATTGAGGTTCACTCCTAGAATTCAACGCCTGAACGAATTGGAAGCTAAAACCAGAATAAAATTAAATTTTCTGGATCAAATAGCCAAATTTTGGGAATTACAAGGTTCTTCTCTGAAAATTCCTATGGTGGAGAAAAGAGCATTAGATTTATACACCCTGCATAGAGTTGTGCAATTAGAAGGTGGGTTTGAGACAGCTTCTAGGGAACGTAAATGGTCAAAAATTGCCATTCGCTTGGGTTATCCACCTGGAAAGAGCATTGGTACGATTTTGAAACAACATTATGAAAGATTACTCTATCCATTTGATGTATTCAAGCAAGGAAAAACAATGGAAATCAAAGTAGATCCTGATGTTCCAGAACGTAATGAGAAAACAGATAAAGATTATAAACCACATGGTATTGTTGGGAGAATGGCAATAAAACCACCGTGTGAGAAAGCCAGACGATCAAAGAGATTTGAGAATCAAAATAATGATGAGGAGAAACCAAAAACCGAAGATGATGATGATGACGATGATGCAGATAGTAAAGAACTGAAGAGACTTCAAATTCATGGAGCTGGACCTAAGATGGCTGGATACAATGATAAAAAGAAAAGATCTAAGAATTTTAATGCTGATTTTGATCCTTTAGCAAAATATGTGTGTCATAATTGTAGTAGAGGAGATTCAGAAGAATTTATGTTGTTATGTGATGGATGTGATGATAGCTATCATACATTTTGTCTGATGCCACCCCTGTCAGATGTGCCTAAAGGAGACTGGCGTTGTCCTAAATGCGTAGCAGAGGAAGTATCCAAACCGATGGAGGCTTTTGGTTTTGAACAGGCTCAAAGAGAATACACATTGCAGCAGTTTGGTGAAATGGCAGATCAGTTCAAATCTGACTATTTCAATATGCCAGTTCATATGGTTCCACTGCCTATGGTTGAGAAGGAATTTTGGAGAATTGTTTCTTCCATCGATGAAGATGTCACAGTAGAGTACGGAGCAGATCTCCACACAATGGACCATGGATCAGGTTTTCCAACAAAAACTTCCATAAATTTATACCCTGGAGATAAGGAATATGCTGATTCTGGGTGGAATTTGAATAATCTTCCAGTACTCGAAGGTTCAGTATTAGGATATATAAATGCGGATATATCTGGGATGAAAGTGCCTTGGATGTATGTAGGAATGTGCTTTGCGACATTCTGTTGGCATAATGAAGACCATTGGAGTTATTCCATCAATTACCTACACTGGGGAGAAGCCAAAACGTGGTATGGCGTACCTGGCAGCAAGGCTGAACTGTTTGAAGAAACTATGAAGTCAGCTGCACCTGAATTATTCCATTCTCAACCTGATTTATTACATCAGTTGGTGACAATAATGAATCCCAATGTTTTAATGAATGCTGGTGTCCCGGTTTACCGTACAGATCAATGTGCAGGGGAATTTGTTGTTACTTTTCCCAGAGCTTACCACGCAGGATTCAACCAAGGTTATAACTTTGCAGAAGCTGTTAATTTTGCCCCAGCAGATTGGCTTCGAATGGGCAGAGAATGTATCCTTCACTATTCGCATTTGAGGAGATTTTGTGTTTTCTCTCATGATGAACTTGTTTGTAAAATGGCACTTGTACCAGATAAGTTAGATATAACAATAGCTGCTGCAACTTATCAAGATATGTTACATATGGTTGATACGGAAAAGAAACTGCGAAAGAACTTACTAGAATGGGGTGTTACAAATGCAGAAAGGGAAGCTTTTGAGTTACTTCCAGACGATGAAAGACAATGTGAAATATGCAAAACAACATGTTTCCTATCGGCTTTAACTTGTACTTGCACTAATGTCTTGGTTTGTTTAAGACATTTTGAAGATTTATGCAAGTGTAATCCAGCAGCACACACTTTGAGGTATAGATACACTCTGGATGAATTACCTGTTATGCTGAAAGGTTTGAAATTGAAAGCAGAATCCTTTGATCATTGGGTGAACCGGGTGAAAGACGCCTTGGATCCCAACACTCCAAAAACATTATCTCTCACCGAATTGAAAGCTTTGTTGAATGAAGCCAACGGCAAGAAATTCCCAAAGTCTGACTTACTCCAAACACTCACAAATGCAGTCGTAGACGCCGAAAAATGCGCCAGTGTCATTCATCAACTTGATTTGAACAAAATAAGGACTAGAACTAGAAATTCTACAGACAACAAGTATAAATTGACAATTGAAGAACTCACTCTTTTTTGCGAAGAGCTGGACAGCCTAGCCTGCCATTTAGATGAAAGTAAAAATATTAAAATGCTACTTCAACAAACCAAAGCCTTTGAAAAAGAAAGCAAAAGGTTGCTCAATTCCAAACTATCGGAATGTGTCCTTTTGGAATTGGAGAATTGTTACAGTTTAGGAAATTCCCTTTGTATAGAACTTCCGGCTCTAAAACAAATTGCTGTCAGAATCAAACAAGCAGCATGGCTGAAAGACGTACTTTCATACAAAAAAAGGTCCGAAGTATTAGCAATCGATTCAATTAACAGCTTGATCAAAGGAGGTATGGACTTGCCACCTCATCCAGAAATGGAGGAAGAATTGGGTGTACTCCAAGGTCTTCTAATTGCCAGTCAAGAATGGGAAACGAAAGCGCAAGCTGTATTGAAAGATAAAGGTAATGACGTCCTGATTGAAGTAGATAAACTACTTGCAGAAGCAGCAGCAATCAATGCCTACCTCCCGACTGAAGAATATTTGTTTGATGCGATCAATAAAGCCAGAGATTGGCTGCGATTACAGGAAGATATGAACTCGGCAGAATATTATCCCTACTATGAAGACATGGAAGAGTTAGTGAAGAAAGGACGAGCCTTACCTTTGTATCTGGTCGAAGTAAATCGGTTAGCAAGTTATCTTGAATCCGCTTATTTGTGGAAAGAAAAGACGAGCAGAGTGTTCCTCCGCAAAAACTCCTCTATAACCCTATTAGAAGCACTCAGTCCTAGGAATAACATAAATCCACCGAAACAGAAGAAGAAAGGAGGTGACGGTCCTGATCCTTTGGAAGGTGCAGACCCAAATTCTTTTGTTACCGTTTTCAAACAAGCTGAGGAGACGGAAATGGATCTGATTAAGAATTTCAGAAAAGAGAATTCTGTGAAAAGTTTGGATCCCAATGACTGTGCCTCTTTTTGTACCTGTCAAAGAGGCGCGTTTGGACTCATGATGCAATGCGAACTCTGCAAGGATTGGTTCCATTCGGTTTGTGTTCAGCTCCCGAAAATTGCTACTACCAGTTTTAAGGGTAACTTCACCATGGCCGCTATGCATTTCGGTTTCAAAGACTGCAAATTTTTATGTCCGAATTGCTGCAGAACCAAACGTCCCAGATTAGATGTTATACTTGGTTTGTTGATGTCACTTCAAAAGTTATATTGCAGATTGCCCGAAGGAGAGGCTTTGCAGTGTTTGACAGAAAGAGCCATGAACTGGCAAGATAGAGCGAGAAATTTACTGCAAAATCCCCAATTGGAAGTAGCTAAAACGATGCTGAGTAATTTCAACAAGAGGTATATGGAAGCAGCGGCCAAACAAAGAACAGAAGAGATAATATCCTGTGAACTGAAGAAAGCTTGCAAAAATCCAGATTTGCAACAAAAAGTGACAGAAATCGCCAATAAGAGCGGTGTTGTTAACACTCTTCAGGAATCTTCCGCCGAATCAGACGACTCCAAAGAATGTACATCAAGTTCACTTCAAGAGGATCACATTGACGAGCATGCATACTCCTTACATTTACCCAAAATCAATGAAGATGAATTCAGGGTCAATATAAGTGCGGAGTTGCATCAACAAATAACCGAATTGTTGATGGAAGGTGATCTGCTCGAAGTGCACCTGGACGAAACTTTGCAGTTATGGAAACTTGTTCAGAGTACCAGAAACCCTGAGAAGGAACCAATATTGATAGATTTCGACCAGCAATCTCTATCAACCCCTGTTAAAAGGGGTAGGAAGAGAAGATCGGAAGAATGTGAAGCTGCAAGAAAATTGAAAAGTGTCAAGTCTAATTTTGCCAAGAAACCTGGAGAGAAGAAGGTTCGCGAAAAGAGAGAGAAGCCAGGGCGAAAGAAACAAAGTGAAAAATCAAAGCAGAAAAAGTCTACAGAGTCTGACGAAGATGAAGATGATGACTACGCTACATGTGCCGCGGCTAATTGTCAGGTACCAACTGGCAACGTTGATTGGGTGCAATGTGATGGTGGTTGTGAACTTTGGTTCCATATGGCTTGTGTGGGACTTTCTGCGGGAGATATAAATGAAGATGAAGACTATATATGTATGTTGTGTTCGCAAGCGTTTGAGAACATAAATACTAATGAAAGTAGTAGATCTAATAGTCCCCCCTCACCTGATTCAACACAACCTTCAACTTCCAAAGAATCTAATTGA
Protein Sequence
MATSKEKMTGMKISPSCSKTEGYKIEADQLFKDEGFEFTVPPEVPVFHPTEEEFADPLAYIGKIRPIAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVQLEGGFETASRERKWSKIAIRLGYPPGKSIGTILKQHYERLLYPFDVFKQGKTMEIKVDPDVPERNEKTDKDYKPHGIVGRMAIKPPCEKARRSKRFENQNNDEEKPKTEDDDDDDDADSKELKRLQIHGAGPKMAGYNDKKKRSKNFNADFDPLAKYVCHNCSRGDSEEFMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPLPMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMLHMVDTEKKLRKNLLEWGVTNAEREAFELLPDDERQCEICKTTCFLSALTCTCTNVLVCLRHFEDLCKCNPAAHTLRYRYTLDELPVMLKGLKLKAESFDHWVNRVKDALDPNTPKTLSLTELKALLNEANGKKFPKSDLLQTLTNAVVDAEKCASVIHQLDLNKIRTRTRNSTDNKYKLTIEELTLFCEELDSLACHLDESKNIKMLLQQTKAFEKESKRLLNSKLSECVLLELENCYSLGNSLCIELPALKQIAVRIKQAAWLKDVLSYKKRSEVLAIDSINSLIKGGMDLPPHPEMEEELGVLQGLLIASQEWETKAQAVLKDKGNDVLIEVDKLLAEAAAINAYLPTEEYLFDAINKARDWLRLQEDMNSAEYYPYYEDMEELVKKGRALPLYLVEVNRLASYLESAYLWKEKTSRVFLRKNSSITLLEALSPRNNINPPKQKKKGGDGPDPLEGADPNSFVTVFKQAEETEMDLIKNFRKENSVKSLDPNDCASFCTCQRGAFGLMMQCELCKDWFHSVCVQLPKIATTSFKGNFTMAAMHFGFKDCKFLCPNCCRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARNLLQNPQLEVAKTMLSNFNKRYMEAAAKQRTEEIISCELKKACKNPDLQQKVTEIANKSGVVNTLQESSAESDDSKECTSSSLQEDHIDEHAYSLHLPKINEDEFRVNISAELHQQITELLMEGDLLEVHLDETLQLWKLVQSTRNPEKEPILIDFDQQSLSTPVKRGRKRRSEECEAARKLKSVKSNFAKKPGEKKVREKREKPGRKKQSEKSKQKKSTESDEDEDDDYATCAAANCQVPTGNVDWVQCDGGCELWFHMACVGLSAGDINEDEDYICMLCSQAFENINTNESSRSNSPPSPDSTQPSTSKESN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2