Basic Information

Gene Symbol
Kdm5
Assembly
None
Location
chr4:19791094-19798014[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-18 1.1e-14 55.0 0.0 2 69 113 179 112 190 0.92
2 2 2 7.2e+03 -2.0 0.0 31 85 1202 1255 1189 1257 0.70

Sequence Information

Coding Sequence
ATGGCGACTTCAAAGGAAAAAATGACTAGTATGAAGTTATTGTCTAGCAGCTCTAAGACAGATTTGGGTTACAAAGTTGAATCTGACCAACTCTTTAAAGATGAAGGTTTTGAATTTAGTGTACCCCAAGAGGTTCCAGTGTTTCATCCTACTGAAGAAGAATTTGCAGATCCCTTAGCTTACATTGGTAAAATTCGTCCAATTGCTGAAAGTACAGGTATATGCAAAATTAAGCCTCCTCCTAATTGGCAGCCTCCATTTGCTGTTGATGTAGATAAATTAAGGTTTACTCCTAGAATCCAACGTTTGAATGAATTAGAAGCCAAAACTAGAATAAAATTGAATTTTCTGGATCAAATAGCTAAATTTTGGGAACTACAAGGTTCTTCTCTGAAAATTCCCATGGTTGAGAAAAGAGCTTTGGATTTATATACATTGCATAGAGTTGTGCAAATGGAAGGTGGATTTGAGTCTGCATCAAAAGAACGTAAATGGTCAAAAATTTCAATTCGACTAGGCTACCCTCCAGGTAAAACCATGGAAATCAAAGTTGATCCTGATATTCCAGAACGTAATGAAAAGACAGATAAGGATTATAAACCTCATGGAATTGTAGGGAGAATGGCGATAAAACCTCCTTGTGAGAAAGCTAGACGATCTAAAAGGTTTGAAAATCAAAATGCAGATGAGGATAAGGCAAAAACTGAATATGATGATGACGATACAGATAGTAATGAATTAAAAAGATTACAAATTCATGGAGCAGGACCTAAGATGGCTGGATATAATGATAAGAAAAAGAGATCTAAAAATTTCAGCACAGAATTTGATCCTTTAGCTAAATATGTATGTCATAATTGTGGTAGAGGGGATTCAGAAGAATTTATGTTATTATGTGATGGATGTGATGATAGTTATCATACATTTTGTCTGATGCCTCCATTGTCAGATGTCCCTAAAGGAGACTGGCGCTGTCCTAAATGTGTAGCAGAAGAAGTTTCTAAACCTATGGAAGCTTTTGGATTTGAACAAGCACAAAGAGAATATACATTACAGCAGTTTGGTGAAATGGCGGATCAATTTAAATCAGAATATTTCAACATGCCAGTTCATATGGTACCACTTCCAATGGTTGAAAAAGAATTTTGGAGAATTGTTTCTTCTATAGATGAAGACGTAACAGTAGAGTATGGAGCAGATTTACATACTATGGACCATGGCTCAGGTTTCCCAACTAAGACATCTATAAACTTATATCCTGGCGATAAAGAATATGCTGATTCAGGTTGGAATTTAAATAATCTGCCTGTACTCGAAGGATCTGTTTTGGGATACATAAATGCAGACATTTCTGGCATGAAAGTTCCATGGATGTATGTAGGAATGTGCTTTGCAACATTTTGCTGGCATAATGAAGATCACTGGAGCTATTCCATCAATTATTTGCACTGGGGAGAAGCCAAAACATGGTATGGTGTTCCTGGTAGCAAGGCAGAATTGTTTGAGGAAACTATGAAATCAGCAGCACCTGAATTATTTCATTCTCAACCCGATCTTTTGCATCAATTGGTTACTATAATGAACCCCAATGTGTTAATGAATGCTGGAGTTCCTGTATATCGTACTGATCAGTGTGCCGGAGAATTTGTTGTTACTTTTCCAAGAGCCTACCACGCAGGTTTCAATCAAGGATATAATTTCGCAGAAGCAGTTAATTTTGCTCCTGCAGACTGGCTGAGAATGGGCAGAGAATGTGTTCTTCACTATTCACACTTGAGAAGATTCTGTGTGTTCTCACATGACGAGCTTGTCTGTAAGATGGCCCTTGTACCAGATAAACTAGATATAACAATAGCTGCAGCCACTTACCAAGATATGTTGCATATGGTTGATACTGAAAAGAAACTTCGTAAAAATTTATTGGAATGGGGTGTTACAAGTGCGGAGAGGGAAGCTTTTGAATTACTACCAGATGATGAAAGACAATGTGAAATATGCAAAACAACATGTTTCTTATCAGCATTAACATGTACTTGTACTAATGTCTTAGTTTGTTTGAGACATTTTGAAGATTTATGCAAATGTAATCCAGGAGCACATACCCTGAGGTATCGTTATACTTTAGATGAATTGCCCGTAATGTTGAAAGGACTCAAGTTGAAAGCTGAATCATTTGATCATTGGGTAAATCGAGTAAAAGATGCTCTGGATCCTAACACTCCAAAAACCTTATCCCTTACAGATTTGAAAGCTTTGTTGAATGAAGCTAATGGCAAGAAATTCCCTAAATCTGATTTACTTCAAACACTCACTAATGCAGTAGTAGATGCAGAAAAGTGTGCTAGTGTTATCCATCAACTTGATTTGAATAAAATAAGAACCAGGACTAGAAATTCAACAGATAATAAATACAAATTGACAATTGAAGAACTTACATTGTTTTGTGAGGAACTAGACAGCTTAGCTTGTCATTTAGATGAGAGCAAAAATATTAAAATGTTACTACAACAGACCAAAGCTTTCGAAAAAGAAAGTAAAAAATTACTGAATTCAAAACTATCAGATTGTGTCCTCACCGAATTGGAAAATTGTTATAGTTTAGGAAACTCGTTATGTATTGAACTACCAGCTTTAAAACAAATTGCTATTAGAATAAAACAGACTGCATGGTTGAAAGATGTACTGTCATACAAAAAAAGATCTGAAGTGTTGGCAATAGATTCAATTAACAGCTTAATTAAAGGAGGAATGGACTTGCCACCTCATCCAGAAATGGAGGAAGAATTAGGAATTCTTCAGGGCCTTCTCATTGCCAGTCAGGAGTGGGAAACAAAAGCTCAAGCTGTACTAAAAGATAAAGGTAATGATGTTCTTATAGAAGTGGATAAACTATTAGCAGAAGCAGCAGCTATCAATGCTTACCTCCCAACAGAAGAATATCTGTTTGATGCAATTAATAAAGCACGTGATTGGCTTCGATTACAAGAAGATATGAATTCAGCAGAATATTATCCCTATTATGATGATATGGAAGAGTTGGTTAAGAAAGGACGTGCATTGCCTTTGTATTTAGTTGAAGTGAACCGTTTATCTTGCTTTCTAGAATCAGCATCTATATGGAAAGAAAAGACTAGCAGAGTATTTCTTCGGAAAAATTCCTCAGTAACCCTCATAGAAGCACTTAGTCCAAGAAATTACATAACTCCACCAAAGCAAAAAAAGAAAGATAAAGATGATCAAGTTCCAATTTTTGAAAATGGAGACCCTGTTTCCATTGTATCTGCTTTCAAGCAAGCCGAAGAAAAGGAAATGGAATTGATGAGAAATTTGAGGAAAGAGAATTCCTTAAAAAGTTTAGATCCTAACGATTGTGCATCCTTTTGCACATGTCAAAGAGGAGCTTTTGGACTTATGATGCAATGTGAACTTTGTAAAGATTGGTTTCATTCTGTTTGTGTTCAACTCCCAAAAATTGCTACCACAAATTTCAAGGGTAATTTTACCATAGCCGCTATGCATTTTGGTTTTAAAGACTGCAAATTTTTATGTCCAAATTGCTGTAGAACTAAACGTCCACGACTGGATGTTATTCTTGGCTTGTTGATGTCTCTTCAAAAATTGTATTGCCGATTACCGGAAGGGGAAGCATTGCAGTGTTTGACTGAGAGAGCAATGAATTGGCAAGATCGAGCCAGAAACATATTACAAAATTCTGAGTTGGAAGAAGCTAAAAAAATTTTAAGTGATTTCCACAAAAGATATATGGAAGCTGCTGCGAATCAAAGGACTGAAGAAACAATATCCAATGAACTGAAAAAACCTGTTGAAAAACCAGATTTACAACAGAAAGTGCGAGAAATTACAAATCAGAGTAGTATTAGCAAGTTGCAGGAATCCTCAGGTGAATCAGATGATTCTAAGGAGTGTACGTCAAGTTCACTTCAAGAAGATCATATAGATGAACATGCATATTCGTTACATCTACCCAAAATCAATGAAGAGGAGTTTAGAGTTCAAATAAGTGCTGATTTGAATGAACAAATTTCAGAATTATTGATGGAAGGAGATCTACTCGAAGTGCACCTTGATGAGACTCTTCAGTTGTGGAAACTTGTTCAATCTACCAGAAACCCAGAAAAAGAACCTATATTGATAGATTTTGACCAACAATCGCAGTCTTTCCCAGCTAAAAGAGGTAGAAAGAGAAGATCAGAGGAATGTGAAGCTGCCCGTAAATTAAAAAGCATAAAGACCAATCCAGCCAAAAAACCTGGTGATAAGAAAATTCGTGAAAAGAGGGAAAAACCCGGACGAAAAAAGTGCAGTGAAAAATCAAAGCAAAAGAAATCTGCCGATTCTGATGAAGAGGATGAAGATGACCAGTATGCTACATGCGCTGCTTCTAATTGCCAGGTACCCACTGGCAACGTGGATTGGGTACAGTGTGATGGTGGATGTGAACTTTGGTTCCATATGGCTTGTGTAGGACTATCAGCCGGAGATATAAATGAAGATGAAGACTATATCTGTATGTTATGTTCTCAAGTATTTGAAAACTTGAATACTAATGAAAGTAGTAGGTCGAATAGTCCCCCATCACCTGATTCAACACAACCTTCAACTTCCAAAGATACTAATTGA
Protein Sequence
MATSKEKMTSMKLLSSSSKTDLGYKVESDQLFKDEGFEFSVPQEVPVFHPTEEEFADPLAYIGKIRPIAESTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVQMEGGFESASKERKWSKISIRLGYPPGKTMEIKVDPDIPERNEKTDKDYKPHGIVGRMAIKPPCEKARRSKRFENQNADEDKAKTEYDDDDTDSNELKRLQIHGAGPKMAGYNDKKKRSKNFSTEFDPLAKYVCHNCGRGDSEEFMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLPMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMLHMVDTEKKLRKNLLEWGVTSAEREAFELLPDDERQCEICKTTCFLSALTCTCTNVLVCLRHFEDLCKCNPGAHTLRYRYTLDELPVMLKGLKLKAESFDHWVNRVKDALDPNTPKTLSLTDLKALLNEANGKKFPKSDLLQTLTNAVVDAEKCASVIHQLDLNKIRTRTRNSTDNKYKLTIEELTLFCEELDSLACHLDESKNIKMLLQQTKAFEKESKKLLNSKLSDCVLTELENCYSLGNSLCIELPALKQIAIRIKQTAWLKDVLSYKKRSEVLAIDSINSLIKGGMDLPPHPEMEEELGILQGLLIASQEWETKAQAVLKDKGNDVLIEVDKLLAEAAAINAYLPTEEYLFDAINKARDWLRLQEDMNSAEYYPYYDDMEELVKKGRALPLYLVEVNRLSCFLESASIWKEKTSRVFLRKNSSVTLIEALSPRNYITPPKQKKKDKDDQVPIFENGDPVSIVSAFKQAEEKEMELMRNLRKENSLKSLDPNDCASFCTCQRGAFGLMMQCELCKDWFHSVCVQLPKIATTNFKGNFTIAAMHFGFKDCKFLCPNCCRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARNILQNSELEEAKKILSDFHKRYMEAAANQRTEETISNELKKPVEKPDLQQKVREITNQSSISKLQESSGESDDSKECTSSSLQEDHIDEHAYSLHLPKINEEEFRVQISADLNEQISELLMEGDLLEVHLDETLQLWKLVQSTRNPEKEPILIDFDQQSQSFPAKRGRKRRSEECEAARKLKSIKTNPAKKPGDKKIREKREKPGRKKCSEKSKQKKSADSDEEDEDDQYATCAASNCQVPTGNVDWVQCDGGCELWFHMACVGLSAGDINEDEDYICMLCSQVFENLNTNESSRSNSPPSPDSTQPSTSKDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348609;
90% Identity
iTF_01023625;
80% Identity
-