Basic Information

Gene Symbol
Kdm5
Assembly
GCA_013387265.2
Location
JABFTP020000144.1:118646539-118651287[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-25 3.3e-21 77.1 0.0 2 89 114 197 113 197 0.95
2 2 1.1 6.7e+03 -0.7 0.0 31 84 1230 1282 1216 1286 0.73

Sequence Information

Coding Sequence
ATGGCGACCAATAAGGATAAAACGCCAACTGGTGGTAAATTATCACCTAGTTGTTCAAAAACAGATATACTATGTAAAAATGAAGCTGGACAAGGTTTCAAGGATGAATGTTTTGAGTTCAAAATACCTCCTGATGCACCTGTTTTTCATCCCACGGAAGATGAATTTGCAGATCCTTTGGCATATATTGGTAAAATTCGACCAGTTGCAGAAAATACAGGAATATGTAAGATAAAACCTCCACCTAATTGGCAACCACCATTTGCGGTTGATGTAGATAAATTGAGATTCACTCCAAGAATTCAACGTCTAAACGAACTTGAAGCCAAAACTAGAGTCAAATTGAATTTCCTTGATCAAATAGCCAAGTTTTGGGAACTGCAAGGTTCATCATTAAAAATTCCAATGGTAGAAAAAAGGGCACTAGACTTATACACTCTACATAGAGTTGTTCAGTTAGAAGGTGGATTCGATAATGCTTCGAAAGAGCGTAAATGGTCTAAAATTGCGCTCCGCCTTGGTTATCCACCGGGAAAAAGTATTGGAACTATGCTCAAACAGCATTATGAAAGACTCCTCTTTCCATTTGATGTTTTCAAACAAGGAAAAACGATGGAAATTAAGGTAGACCCTGATGTTCCagaacgaaatgaaaaaactgacaAAGATTATAAACCCCATGGTATTGTAGGAAGAATGGCAATTAAACCCCCTTGTGAGAAAGCTAGACGTTCTAAAAGGTTTGAAAACCAGAACGATCAAGATAACAAAGATAAAATCAAGAAAGAAGTAAAggatgaagatgaagataacAAAGAGCTGAAACGGTTGCAATTTTACGGAGCTGGCCCCAAAATGGCTGGATACAATGATAAGAAAGAGAAAAGACCAAAAAATTGCAATAATGAATTCGACCCACTCGCTAAATATGTCTGTCATAATTGTAGTAGGGGTGACTCTGAAGAATTTATGTTACTATGCGATGGCTGTGATGATAGCTATCATACTTTTTGTTTAATGCCACCTTTATCAGATGTACCTAAAGGTGACTGGCGGTGTCCTAAATGTGTCGCAGAAGAAGTATCTAAACCAATGGAGGCGTTTGGATTCGAACAGGCTCAAAGAGAGTATACTTTACAACAATTTGGAGAAATGGCAGATCAATTCAAGTCCGAATATTTTAATATGCCAGTTCATATGGTTCCCCTTTCAACGGTAGAAAAAGAATTCTGGCGAATTGTTTCTTCCATTGACGAAGATGTTACCGTCGAATATGGAGCAGATCTGCATACTATGGACCATGGTTCAGGTTTTCCCAcaaaaacatcaataaatttgTATCCAGGTGACAAAGAGTATGCTGATTCAGGATggaatttgaataatcttcCTGTTCTCGAAGGCTCTGTATTGGGATACATCAACGCCGATATATCTGGCATGAAAGTACCTTGGATGTATGTTGGAATGTGTTTTGCAACTTTCTGCTGGCACAACGAGGATCACTGGAGTTATTCCATCAACTACTTACATTGGGGTGAAGCTAAGACATGGTATGGAGTTCCTGGAAGCAAAgctgaattatttgaagaaacaaTGAAATCAGCAGCACCTGAATTGTTCCATTCCCAACCAGATCTTTTACATCAATTGGTGACTATCATGAATCCTAATGTACTAATGAACGCAGGTGTTCCTGTATATCGCACAGACCAATGTGCTGGTGAATTTGTAGTAACATTCCCAAGAGCATATCATGCAGGGTTTAATCAAGGCTATAACTTTGCAGAAGCTGTGAATTTTGCACCAGCAGATTGGCTACGAATGGGTCGCGAATGCATTCTGCACTACTCGCATTTACGAAGATTCTGCGTGTTTTCCCACGACGAGCTCGTTTGTAAAATGGCTCTAGTACCTGATAAACTAGATATCACAATTGCTGCAGCAACATACCAAGATATGTTGCAAATGGTAGATACCGAAAAGAAACTGCGCAAGAACTTACTAGAGTGGGGAGTAACGAATGCTGAAAGAGAAGCTTTCGAACTCCTTCCGGATGATGAAAGACAATGCGATATTTGCAAGACTACTTGCTTTTTATCTGCAGTCACTTGTACCTGCACCAACGttctagtttgtttacgacattACGAGGAATTGTGTAAGTGTGATCCACCTGCGCATACTTTGAGGTATCGTTATACTTTAGATGAGTTACCTGTTATGTTAAAAGGTTTGAAATTAAAAGCAGAATCTTTCGATCATTGGGTTAGTCGGGTTAAGGATGCCTTGGATCCCAACACACCAAAAGTATTATCATTAACCGAATTGAAAGCTTTATTGAATGAAGCAAATGgaaaaaagtttccaaaatcTGATTTACTTCAGACCCTTACAAATGCTGTAGAAGATGCTGAAAAGTGTGCCAGCGTTATACATCAGTTAGATTTAAATAAAATACGTACTAGAACTAGAAATTCTTCAGACACCAAATATAAATTGACTGTTGAAGAACTAACACTCTTCTGTGACGAAATAGATAGCTTAGCTTGTGTTTTAGAAGAGAGCAAGAACATAAAGCTATTACTCCAACAAACTAaagcttttgaaaaagaaaGCCAAAGACTCCTTGATTTGAAATTATCCCAGTGCCCCCTAAATGACTTGGAGAATTGCCATAGCCTTGGTAATTCTTTATGCATAGAATTACCGAATTTAAGACGAGTTTCAATACGAATAAAACAAGCAGCTTGGTTGAAAGATGTACTTTCCTATAAGAAGCGGGTTGAGGTACTTGCAATCGATTCCATAAACAGTCTGATTAAAACAGGTACAGAATTACCCCCAAATCCTGAGATGGAAGAAGAATTAGAGAATCTACAACAACTACTTGTGGTTAGTCAAGAGTGGGAGACTAAAGCTCAAAATGTTCTCAAAGATAAAAGTAATGATGTTCTCATCGAAGTCGATAAATTATTAGCGGATGCAGCCAATATCAATGCATATCTTCCTACTGAAGAGTATTTATTTGAAGCTATTAATAAAGCCAGGGATTGGCTTCGTTTACAAGAAGAAATGAATTCTGCAGAGTATTACCCTTACTACAATGCAATGGAGGACTTAGTTAAGAAAGGACGAGCATTACCCCTATATCTAGTAGAAGTAAATAGATTAGAATCATATCTCGAATCAGCTGCAGTTTGGAAGGAAAAAACTAGTCGAGTATTCCTCCGCAAAAATTCCACTGTCACCCTCATGGAGGCGCTAAGTCCTAGAACCAGCTTATTTCcttcgaaaaataagaaaaagcaCTGTGATGATCAACTTCAAGTATTTGAAGATGGCGACCCAGCTGCTGTAGTCAATGCATTCAAATATTCTGAAGATAAAgaaatggaattaatgaaaagtTTAAGACGTGATAATTCCACTAAGAGTTTAGACCCAAATGATTGTGCATCATTTTGCATATGTCAAAGAGGCGCATTTGGTCTGATGATGCAGTGTGAGCTCTGTAGAGAGTGGTTCCATTCAATTTGTGTCCAACTTCCTAAAGTTGCTACAACAAGCTTTAAAGGCAACTTTACAACTGCTGCAATGCAGTATGGCTTCAAAGATTGCAAATTTCTCTGTCCAAATTGTTTCAGAACAAAGAGACCTAGACTTGATGTTATTCTTGGCTTGTTAATGTCGCTCCAAAAATTGTACTGCAGGCTACCTGAAGGTGAAGCTTTGCAATGTTTGACTGAAAGAGCCATGAATTGGCAAGATAGAGCTAGAAACTTGTTACAACATCCTGAACTGGAAGTTGTTAAAACGACAttgatgaattttcatcaaaagtatACAGAAGCTGCTGCTCGGCAAAGGACTGAAGAGATTATATCAACAGAACTGAAAAAGGCTTACAAGAATCCTGACTTACACCAAAGAGTATCTGAAATCGCACACAAAAGTGGTgtttctgataatttgaatgaatCTTCTCTGGGCGAATCAGATGATTCAAAAGAATGTACCTCTACATCACCTTCGGAAGATCACATAGATGAACATGCATATTCTTTACATCTCCCAAAACTTAATGAAGAGGAATTTAGAGTGCATATAAGTGCAGAAGTTCACCATCAATTGTCTGAACTCTTAATGGAAGGAGACTTACTAGAAGTACATCTGGACGAAACTTTACAGTTGTGGAAATTTCTACAAGCTACTAGAAATCCTGATAAAGACCCTGTGTTGATAGATTTTGATCAACAATCTAAAAGTACTCCAGTCAAGAGAGGTAGAAAGAGGAGGTCAGAAGAATCTGAAGCTGCTCGAAAAGTGAGAGCGGTTAAAGTTAATCTAAATAAGAAAGCAAACGATAAAAAAGTACGAGTAATAagagaaaaaaaggaaaaacctggcaaaaagaaaaacattgacAAAGTTAAAAATAAGGGAAGTAAGACGGCAGAATCAGAAGAGGAAGAAGATGATGCTTATGAGACTTGCGCAGCAGCAAATTGTCAAAAACCAACTGGTAATGTTGATTGGGTACAGTGTGATGGTGGCTGTGAACTTTGGTTCCATATGGCCTGTGTTGGACTCTCTGCTGAAGACATCAATGAAGATGAAGACTATATCTGCATTTTATGCTCCCAAGGACCTGCTTTCGAAAACTTAAATGTTAATGAAAGTAGTAGATCAAATAGCCCACCTTCACCAGATTCAACACAACCTACATCTTCCAGAGATACGAATTGA
Protein Sequence
MATNKDKTPTGGKLSPSCSKTDILCKNEAGQGFKDECFEFKIPPDAPVFHPTEDEFADPLAYIGKIRPVAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVQLEGGFDNASKERKWSKIALRLGYPPGKSIGTMLKQHYERLLFPFDVFKQGKTMEIKVDPDVPERNEKTDKDYKPHGIVGRMAIKPPCEKARRSKRFENQNDQDNKDKIKKEVKDEDEDNKELKRLQFYGAGPKMAGYNDKKEKRPKNCNNEFDPLAKYVCHNCSRGDSEEFMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLSTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMLQMVDTEKKLRKNLLEWGVTNAEREAFELLPDDERQCDICKTTCFLSAVTCTCTNVLVCLRHYEELCKCDPPAHTLRYRYTLDELPVMLKGLKLKAESFDHWVSRVKDALDPNTPKVLSLTELKALLNEANGKKFPKSDLLQTLTNAVEDAEKCASVIHQLDLNKIRTRTRNSSDTKYKLTVEELTLFCDEIDSLACVLEESKNIKLLLQQTKAFEKESQRLLDLKLSQCPLNDLENCHSLGNSLCIELPNLRRVSIRIKQAAWLKDVLSYKKRVEVLAIDSINSLIKTGTELPPNPEMEEELENLQQLLVVSQEWETKAQNVLKDKSNDVLIEVDKLLADAANINAYLPTEEYLFEAINKARDWLRLQEEMNSAEYYPYYNAMEDLVKKGRALPLYLVEVNRLESYLESAAVWKEKTSRVFLRKNSTVTLMEALSPRTSLFPSKNKKKHCDDQLQVFEDGDPAAVVNAFKYSEDKEMELMKSLRRDNSTKSLDPNDCASFCICQRGAFGLMMQCELCREWFHSICVQLPKVATTSFKGNFTTAAMQYGFKDCKFLCPNCFRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARNLLQHPELEVVKTTLMNFHQKYTEAAARQRTEEIISTELKKAYKNPDLHQRVSEIAHKSGVSDNLNESSLGESDDSKECTSTSPSEDHIDEHAYSLHLPKLNEEEFRVHISAEVHHQLSELLMEGDLLEVHLDETLQLWKFLQATRNPDKDPVLIDFDQQSKSTPVKRGRKRRSEESEAARKVRAVKVNLNKKANDKKVRVIREKKEKPGKKKNIDKVKNKGSKTAESEEEEDDAYETCAAANCQKPTGNVDWVQCDGGCELWFHMACVGLSAEDINEDEDYICILCSQGPAFENLNVNESSRSNSPPSPDSTQPTSSRDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348609;
90% Identity
iTF_00415671;
80% Identity
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