Basic Information

Gene Symbol
Kdm5
Assembly
GCA_030704885.1
Location
JARQZK010002193.1:262230-266975[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-23 2e-19 72.0 0.0 2 89 114 197 113 197 0.95
2 2 1.7 1.5e+04 -1.3 0.0 32 84 1231 1282 1217 1305 0.64

Sequence Information

Coding Sequence
ATGGCGACCAACAAAGATAAAACTACAACAGGTAGTAAATTATCACCCAGTTGTTCAAAAACAGACACAGTGTGCAAAAATGAAACACCACAAAGCTTTAAGAATGAGTGTTTTGAGTTCAGAGTACCCCCAGAAGCGCCGATATTTCATCCTACTGAAGATGAATTTGCAGACCCATTAGCTTATATTGGCAAAATTCGCCCTGTTGCAGAAAACACTGGAATATGCAAAATAAAACCCCCACCAAATTGGCAGCCCCCATTTGCTGTAGATGTAGATAAACTCAGATTTACTCCTAGAATCCAGCGTTTGAATGAACTTGAAGCCAAAACTAgagttaaattaaattttctagatCAAATAGCAAAGTTTTGGGAATTACAAGGATCTTCCCTTAAAATTCCCATGGTCGAGAAAAGAGCTCTAGATTTATACACCTTACATAGAGTTGTGCAATTAGAAGGTGGATTTGAAAATGCTTCTAGAGAACGTAAATGGTCAAAAATTTCTGTTCGTCTTGGGTACCCAGCTGGGAAAAGCATTGGTGCTATCCTTAAGCAACATTATGAAAGACTTCTGTTTccttttgatgttttcaaacaAGGTAAAACTGTAGAGATCAAAGTTGACCCTGATATTCCAGAGCGCAATGAAAAAACTGATAAGGACTATAAACCTCATGGTATAGTAGGAAGAATGGCAATCAAACCACCTTGTGAAAAAGCTAGGCGTTCTAAGAGGtttgaaaatcaaaacaatgaagagaacaaagataaaattaaaaaggaATTGAAGGATGAAGATGAAGACAACAAAGAATTGAAAAGATTGCAATTTTATGGAGCTGGGCCAAAAATGGCTGGGTTCAATGATAAGAAGGAGAAACgtccaaaaaattcaaacaatgaatttgaTCCCTTAGCTAAATATGTTTGTCACAACTGTAATAGAGGTGATTCTGAAGAATTCATGTTATTATGTGATGGTTGTGACGACAGCTACCACACATTTTGTTTAATGCCTCCTCTATCAGATGTTCCAAAAGGTGATTGGCGTTGTCCTAAATGTGTTGCAGAAGAAGTTTCAAAACCAATGGAAGCATTTGGATTTGAGCAGGCCCAAAGGGAATATACTTTACAACAATTTGGCGAAATGGCAGATCAATTCAAATCAGAATATTTCAACATGCCAGTTCACATGGTTCCACTCACTACTGTAGAAAAAGAATTCTGGAGAATAGTATCATCAATAGATGAAGATGTGACTGTAGAATATGGTGCAGATCTTCATACTATGGACCATGGATCAGGTTTTCCTACTAAGACTTCCATAAATTTGTATCCTGGTGATAAGGAGTATGCAGATTCTGGATGGAATTTAAATAATCTCCCAGTTCTGGAAGGTTCAGTTCTAGGGTACATCAATGCAGATATTTCTGGTATGAAGGTGCCATGGATGTATGTGGGAATGTGTTTTGCAACATTTTGTTGGCATAATGAAGACCACTGGAGTTATTCCATCAACTACTTACATTGGGGAGAGGCTAAAACATGGTATGGAGTACCAGGAAGCAAAGCagaattatttgaagaaactaTGAAATCAGCAGCACCTGAATTATTTCATTCTCAACCAGATCTTTTACATCAATTGGTTACTATAATGAATCCAAATGTATTAATGAATGCAGGAGTACCTGTGTACCGCACAGATCAATGTGCTGGTGAGTTTGTGATTACTTTTCCAAGAGCATATCATGCTGGTTTCAACCAGGGCTATAATTTCGCAGAAGCTGTTAATTTTGCACCTGCAGATTGGCTCAGAATGGGCCGAGAGTGCATTCTTCATTATTCACATTTGAGGAGGTTCTGTGTGTTTTCACATGATGAACTTGTATGCAAAATGGCCTTGGTACCTGACAAATTAGATATTACCATAGCAGCTGCTACTTATCAAGATATGATACAAATGGTTGATACAGAAAAGAAACTGCGTAAAAATTTATTAGAATGGGGAGTTACAAATGCTGAGAGGGAAGCATTTGAACTTCTTCCAGATGACGAAAGGCAATGTGAAATTTGCAAGACAACTTGCTTTTTATCTGCTGTTACTTGTACCTGCTCAAACGTTCTAGTTTGTTTAAGGCATTATGAAGAGTTATGTAAATGTAAACCACCTGCACATACTTTACGTTATCGTTATACTCTAGATGAATTGCCTGTTATGTTGAAGGGTCTGAAACTAAAAGCAGAATCATTTGATCACTGGGTGAGTAAGGTGAAAGATGCCCTGGATCCTAATACCCCAAAAGTATTATCTTTGACTGAATTGAAAGCATTGTTAAATGAAGCTAATGGTAAGAAATTTCCAAAGTCTGATTTAATGCAAACATTAACAAATGCTGTAGAAGATGCTGAAAAATGTGCTAGCGTTATCCATCAGTTAGATTTGAATAAAATACGAACTAGAACAAGAAATTCTTCCGACACTAAATATAAATTAACTATTGAAGAACTGACTCTCTTTTGTGAGGAAATAGATAGCCTAGCCTGTATTTTAGAGGAAAgcaaaaacataaaaatgttaCTCCAGCAAACTAAAGCATTCGAAAAAGAAAGTCAAAGATTAGTTGATTCCAAATTATCTCAGTGTGCTCTTAGTGATTTGGAAAACTGCCATAGTCTAGGAAATTCCTTGTGCATTGAATTACCGAATTTGAAGAGAATTTCTACAAGGATAAAGCAAGCAGCTTGGCTGAAAGATGTAATTTCGTATAAAAAAAGAGTTGAGGTGCTTGCCATTGATTCAATAAATAGTTTGATTAAAACTGGAACAGAATTACCACCGAATCCAGAGATGGAGGAAGAATTGGAGAACTTGCAAAGTCTTCTTGTGACAAGTCAGGAGTGGGAAACAAAAGCACAATCTGTTCTAAAAGATAAAAGTAATGATGTTCTCATTGAAGTGGACAAGTTACTAGCAGATGCTGCAAATATCAATGCATACCTTCCAACAgaagaatatttatttgaagCTATCAATAAAGCTAGAGACTGGCTTCGTTTACAAGAAGAAATGAATTCAGCAGAATATTATCCTTACTATAGTGCAATGGAAGAATTAGTCAAGAAAGGCCGTGGGCTACCGCTGTATTTAGTTGAAGTCAATAGATTGGAATCATATCTTGAGTCAGCTGCAATTTGGACGGAAAAAACTAGCAGAGTTTTCCTGCGAAAAAATTCCACTATCATTCTGATGGAAGCACTTAGTCCTAGAACTAGTTTATTTCCACCAAAAGCAAAGAAAAAACAATCTGAAGATCAAATCCAAGTATTTGAAGATGGTGATCCAACTGCTGTGGTTAACGCATTCAAATATTCTGAAGATAAGGAAATGGAATTGATGAAAAACTTAAGACATGAAAATTTGGCTAAAAGCTTAGATCCGAATGATTGTGCATCATTCTGTATTTGTCAGAGGGGAGCGTTTGGCCTCATGATGCAATGTGAGCTCTGTAAAGACTGGTTCCATTCAATTTGTGTTCAGCTTCCTAAGGTGGCAACAACAAGTTTCAAGGGTAACTTTACTACAGCTGCTATGCATTATGGTTTTAAAGACTGCAAATTTCTGTGCCCAAATTGCTTCAGGACGAAGCGTCCTAGGTTAGATGTTATTCTCGGATTGCTGATGTCACTTCAGAAGTTATATTGTCGGTTACCAGAAGGTGAAGCATTGCAATGTCTAACTGAGCGAGCCATGAATTGGCAGGATAGAGCTAGAAGTTTATTACAAAATGCTGAATTGGAAGGAGTGAAAACAACTTTggtgaattttcatcaaaaatacaCAGAAGCTGCTGCAAAGCAGAGGACTGAAGAGATTATATCTACAGAACTGAAAAAGGCATACAAAAATCCTGACTTACACCAAAGAGTAACTGAAATCGCTCACAAGAGTGGCGTTTCGGACAATTTGAACGAGACATCCTTAACTGAATCGGATGATTCAAAGGAATGTACTTCAACTTCTCCTCCAGAAGATCACATAGACGAACATGCGTATTCTTTACATCTTCCAAAACTTAACGAAGATGAATTTAGGGTCCATATAAGTCCAGAGGTTCATCAACAATTATCTGAGCTCTTGATGGAAGGTGATTTACTTGAAGTGCATTTGGACGAAACTTTACAGTTATGGAAACTCTTGCAAGCCACAAGAAATTCTGATAAGGACCCTGTATTGATTGATTTTGATCAACAGTCTCGAAGTACCCCAGTAAAAAGGGGCAGGAAGCGACGCTCTGAAGAATCAGAAGCTGCGCGGAAGGTAAAAGCTGTTGTTAAGATGaacttgaataaaaaaaacacagaGAAAAAAGTGAGAGAGAAAAAGGAAAAACCTATTAGAAAGAAGAATACTGAAAAAACCAAAGGCAAGGGCAGTAAAGCGGCAGAATCTGAAGATGATGAAGCAGATGATACCTATGACACTTGTGCTGCTACTAACTGTCATAAACCAACTGGAAATGTAGACTGGGTACAATGTGATGGTGGTTGTGAACTTTGGTTCCATATGGCTTGTGTCGGACTTTCGGCAGAAGATATTAATGAAGATGAAGACTACATCTGCATATTATGTTCTCAAGGACCGGCTTTTGAGAATTTAAATGCTGACGAAAGCAGCAGATCGAATAGTCCACCTTCTCCTGATTCAACACAACCCTCCACTTCCAGAGATACAAATTAA
Protein Sequence
MATNKDKTTTGSKLSPSCSKTDTVCKNETPQSFKNECFEFRVPPEAPIFHPTEDEFADPLAYIGKIRPVAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVQLEGGFENASRERKWSKISVRLGYPAGKSIGAILKQHYERLLFPFDVFKQGKTVEIKVDPDIPERNEKTDKDYKPHGIVGRMAIKPPCEKARRSKRFENQNNEENKDKIKKELKDEDEDNKELKRLQFYGAGPKMAGFNDKKEKRPKNSNNEFDPLAKYVCHNCNRGDSEEFMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLTTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECILHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMIQMVDTEKKLRKNLLEWGVTNAEREAFELLPDDERQCEICKTTCFLSAVTCTCSNVLVCLRHYEELCKCKPPAHTLRYRYTLDELPVMLKGLKLKAESFDHWVSKVKDALDPNTPKVLSLTELKALLNEANGKKFPKSDLMQTLTNAVEDAEKCASVIHQLDLNKIRTRTRNSSDTKYKLTIEELTLFCEEIDSLACILEESKNIKMLLQQTKAFEKESQRLVDSKLSQCALSDLENCHSLGNSLCIELPNLKRISTRIKQAAWLKDVISYKKRVEVLAIDSINSLIKTGTELPPNPEMEEELENLQSLLVTSQEWETKAQSVLKDKSNDVLIEVDKLLADAANINAYLPTEEYLFEAINKARDWLRLQEEMNSAEYYPYYSAMEELVKKGRGLPLYLVEVNRLESYLESAAIWTEKTSRVFLRKNSTIILMEALSPRTSLFPPKAKKKQSEDQIQVFEDGDPTAVVNAFKYSEDKEMELMKNLRHENLAKSLDPNDCASFCICQRGAFGLMMQCELCKDWFHSICVQLPKVATTSFKGNFTTAAMHYGFKDCKFLCPNCFRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARSLLQNAELEGVKTTLVNFHQKYTEAAAKQRTEEIISTELKKAYKNPDLHQRVTEIAHKSGVSDNLNETSLTESDDSKECTSTSPPEDHIDEHAYSLHLPKLNEDEFRVHISPEVHQQLSELLMEGDLLEVHLDETLQLWKLLQATRNSDKDPVLIDFDQQSRSTPVKRGRKRRSEESEAARKVKAVVKMNLNKKNTEKKVREKKEKPIRKKNTEKTKGKGSKAAESEDDEADDTYDTCAATNCHKPTGNVDWVQCDGGCELWFHMACVGLSAEDINEDEDYICILCSQGPAFENLNADESSRSNSPPSPDSTQPSTSRDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348609;
90% Identity
iTF_00394067;
80% Identity
-