Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963966015.1
Location
OZ014430.1:38736325-38741037[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-23 4.9e-20 72.2 0.0 2 89 113 196 112 196 0.95
2 2 1.1 3.1e+03 -0.9 0.0 31 85 1226 1279 1212 1281 0.71

Sequence Information

Coding Sequence
ATGGCGACTTCTAAGGAAAAAATGACTAGTATGAAGTTATTACCTAGTTGTTCTAAAGCAGATTTGGGATATAAAATTGAGTCTGATCCACTTTTCAAAGATGAGTGTTTTGAATTTTCTGTTCCCCAAGAAGTTCCAGTCTTTCATCCGACTGAAGAAGAGTTTGCAGATCCCTTAGCATATATTGGTAAAATTCGTCCAATTGCTGAAAACACAGGTATATGCAAGATTAAACCTCCTCCCAATTGGCAGCCTCCATTTGCTGTTGATGTAGACAAGTTGAGGTTCACTCCTAGAATCCAACGCCTTAATGAATTAGAAGCCAAGAccagaataaaattgaattttctggatCAGATAGCTAAATTCTGGGAATTACAAGGTTCTTCTCTCAAAATACCTATGGTTGAGAAGAGGGCATTAGATTTATATACATTACATAGAGTGGTACGACTGGAGGGTGGATTCGAATCTGCTTCCAAGGAACGTAAATGGTCGAAAATCTCAATTCGACTGGGTTATCCACCGGGGAAAAGTATCGGTACCATTTTAAAACAACATTATGAGAGATTACTTTATCCATTCGACGTATTCAAACAAGGTAAAACTATGGAGATCAAAGTTGATCTCGATGTTCCTGAACGTAACGAAAAAACCGATAGAGATTACAAACCGCATGGTATTGTCGGTAGGATGGCGATAAAACCACCGTGTGAGAAAGCAAGACGATCTAAAAGATTCGAGAATCAGAACCCGGATGAGGATAAGCCGAAAATTGAAGACGACGATGACGAAGCGGATAGTCATGAATTGAAAAGACTGCAAATTCACGGTGCGGGACCTAAGATGGCTGGATATAACGATAAGAAGAAGAGATCTAAGAATTTCAACTCAGAATTTGATCCTTTGGCGAAATATGTATGTCATAACTGCAGTAGAGGGGATTCGGAAGAATACATGTTATTATGCGATGGATGCGACGATAGTTATCATACGTTTTGCCTGATGCCCCCCCTGTCGGATGTCCCTAAAGGGGATTGGCGCTGTCCGAAATGCGTAGCTGAAGAAGTTTCTAAGCCGATGGAAGCGTTCGGATTTGAACAAGCCCAGAGGGAGTATACGTTGCAGCAATTCGGCGAGATGGCAGAtcaattcaaatcagaatatttTAATATGCCAGTCCATATGGTTCCACTCCCTATGGTCGAGAAAGAATTTTGGAGAATCGTTTCTTCTATAGACGAAGACGTGACTGTAGAATACGGTGCAGATCTACACACAATGGACCACGGGTCGGGCTTCCCAACAAAGACGTCCATAAACTTATATCCTGGCGATAAAGAATATGCTGACTCGGGTTGGAATTTAAACAATCTACCAGTACTAGAAGGATCTGTTTTAGGATACATAAACGCCGATATCTCCGGGATGAAAGTTCCTTGGATGTACGTAGGAATGTGTTTTGCGACGTTCTGTTGGCACAACGAAGATCACTGGAGCTACTCCATAAATTACTTGCACTGGGGAGAAGCCAAAACGTGGTACGGCGTTCCAGGTAGCAAGGCTGAATTGTTCGAGGAAACCATGAAATCGGCAGCACCCGAATTATTCCACTCCCAACCGGATCTTTTGCATCAGTTGGTAACCATAATGAACCCCAACGTTTTGATGAATGCCGGAGTTCCGGTATACCGTACAGATCAATGTGCCGGAGAATTTGTCGTTACATTTCCCAGAGCTTACCACGCCGGTTTCAATCAAGGTTATAACTTCGCAGAAGCAGTTAATTTCGCACCTGCAGATTGGCTTAGAATGGGCAGAGAGTGCGTTCTTCACTATTCGCACTTGAGGAGGTTCTGTGTGTTTTCGCATGACGAGCTTGTTTGTAAAATGGCCCTTGTACCGGATAAACTAGATATAACAATTGCTGCTGCAACCTACCAAGATATGTTACATATGGTCGATACCGAGAAGAAACTTCGTAAAAACTTGTTGGAATGGGGTGTAACTAACGCAGAGAGAGAAGCGTTTGAGTTACTTCCGGATGATGAAAGACAGTGTGAAATATGCAAAACGACATGTTTCCTATCCGCGTTAACTTGTACTTGTACCAACGTCTTAGTTTGTTTGAGACATTTCGAAGATTTGTGCAAGTGTAGTTCGGCAGTACATAccttgaggtatcgatataccTTAGACGAATTACCGGTTATGTTGAAAGGGCTTAAATTGAAAGCCGAGTCTTTCGATCATTGGGTGAACCGAGTAAAAGATGCTCTCGATCCCAACACCCCGAAAACCTTATCCCTCACAGATTTGAAAGCTTTGTTGAATGAAGCTAACGGCAAGAAATTCCCAAAATCTGATCTACTTCAAACGCTCACCAATGCTGTAGTCGACGCTGAAAAGTGTGCTAGTGTTATCCATCAActcgatctgaacaaaatacgGACCAGAACCAGAAATTCGACAGACAATAAGTATAAACTGACGATCGAAGAACTCACTTTGTTTTGCGAGGAGCTGGACAGCTTAGCTTGCCATTTAGACGAGAGTAAAAACATTAAAATGTTACTTCAACAAACCAAAGCTTTCGAAAAAGAGAGTAAAAGATTACTGCATTCGAAACTATCAGATTGTGTCCTTTCGGACTTGGAGAATTGTTATAGTTTAGGAAACTCTTTATGTATAGAACTACCGGCTTTAAAACAAATTGCTGTTAGAATAAAACAGACTGCGTGGTTGAAAGACGTGCTTTCATACAAAAAGAGATCTGAAGTATTGGCCATAGATTCAATCAATAGTCTTATTAAAGGAGGGATGGACTTACCACCCCATCCCGAAATGGAGGAAGAATTGGGAATTCTCCAAGGTCTCCTCATTTCCAGTCAGGAGTGGGAAACGAAAGCTCAAGCTGTACTAAAAGATAAGGGTAACGATGTTCTTATCGAAGTGGATAAACTATTAGCAGAAGCAGCAGCGATCAACGCCTACCTCCCAACTGAAGAATATCTGTTTGATGCTATCAATAAAGCTAGAGATTGGCTTCGGTTACAAGAGGATATGAACTCGGCCGAATATTACCCCTATTACGACGATATGGAAGAGCTGGTCAAGAAAGGACGTGCTTTACCTTTGTACCTCGTCGAAGTCAACCGCTTATCCTGCTATCTCGAATCAGCCTATATATGGAAAGAAAAGACTAGCAGAGTATTCCTCCGGAAAAACTCCTCGGTAACTCTCATAGAAGCACTCTGTCCAAGAAACTACATAACCCCGCCGAAACAAAAGAAGAAGGAGAAAGACGATCAAGATCCTCTCTTCGAAGCCGGAGACCCTATTTCTATTGTGACAGCATTCAAGCAAGCCGAAGAGAAGGAAATGGATCTgatgagaaatttgaaaaaagacaATTCCTTGAAAAGTTTAGACCCCAATGATTGCGCTTCATTCTGTACGTGTCAAAGGGGAGCTTTTGGACTTATGATGCAATGCGAACTTTGTAAAGATTGGTTCCATTCGGTTTGCGTTCAACTTCCGAAAATTGCTACTGCGAGTTTCAAGGGTAATTTTACCATAGCTGCGATGCATTTTGGTTTCAAAGACTGCAAATTTTTATGTCCGAATTGCTGTAGGACTAAACGTCCAAGACTAGATGTTATTCTTGGCTTGTTGATGTCTCTTCAAAAATTGTATTGCCGATTACCCGAAGGTGAAGCATTACAATGTTTGACTGAGAGAGCAATGAACTGGCAAGATCGAGCCAGAAATTTATTACAGAATTCTGAATTGGAAGTTGCTAAAACGATGTTGAACAATTTTCACAAAAGATTCATAGAAGCTGCCGCCAAACAAAGAACAGAAGAAATTATATCGAGTGAACTGAAAAAGGCTTGTAAGAATccagatttgcaacaaaaagtgACGGAGATTGCTCATAAGAGTGGTGTTGGCAAGTTGCAAGAATCCTCAGGTGAATCGGATGATTCTAAGGAATGCACATCAAGTTCACTTCAGGAAGATCATATAGATGAACATGCATACTCGTTACATCTACCCAAAATCAATGAAGATGAGTTTCGGGTTCAAATAAGTGCAGATTTGAACCAACAAATATCGGAATTGTTGATGGAGGGAGATTTACTCGAAGTGCACctagatgaaactttgcagttGTGGAAACTCCTTCAGTCTACGAGAAATCCAGAAAAAGATCCGATACTGATAGATTTTGATCAACAGTCCCTGTCCATCCCGGTGAAAAGAGGTAGAAAGAGGAGGTCAGAAGAATGTGAAGCCGCACGTAAACTGAAAAGCGTAAAAGCCAACCTTTCTAAAAAGCCTGGTGATAAGAAAGTTTGCGAGAAGAGGGAAAAACCAGCACGAaagaagaaaactgaaaaatcaaAGGAGAAGAAATCTGCCGAGTCTGATGAAGAGGATGAAGATGACATTTATGCAACATGTGCTGCGGCAAATTGTCAGGTACCTACTGGCAACGTAGATTGGGTACAGTGTGATGGTGGCTGCGAACTCTGGTTCCATATGGCTTGTGTGGGACTGTCAGCCGGAGATATAAACGAAGACGAAGactatatatgtatattatgTTCTCAGGTATTTGAGAACTTGAATACTAACGAAAGTAGTAGATCGAATAGTCCCCCATCACCTGATTCAACACAACCTTCAACTTCCAAAGATactaattga
Protein Sequence
MATSKEKMTSMKLLPSCSKADLGYKIESDPLFKDECFEFSVPQEVPVFHPTEEEFADPLAYIGKIRPIAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVRLEGGFESASKERKWSKISIRLGYPPGKSIGTILKQHYERLLYPFDVFKQGKTMEIKVDLDVPERNEKTDRDYKPHGIVGRMAIKPPCEKARRSKRFENQNPDEDKPKIEDDDDEADSHELKRLQIHGAGPKMAGYNDKKKRSKNFNSEFDPLAKYVCHNCSRGDSEEYMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLPMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMLHMVDTEKKLRKNLLEWGVTNAEREAFELLPDDERQCEICKTTCFLSALTCTCTNVLVCLRHFEDLCKCSSAVHTLRYRYTLDELPVMLKGLKLKAESFDHWVNRVKDALDPNTPKTLSLTDLKALLNEANGKKFPKSDLLQTLTNAVVDAEKCASVIHQLDLNKIRTRTRNSTDNKYKLTIEELTLFCEELDSLACHLDESKNIKMLLQQTKAFEKESKRLLHSKLSDCVLSDLENCYSLGNSLCIELPALKQIAVRIKQTAWLKDVLSYKKRSEVLAIDSINSLIKGGMDLPPHPEMEEELGILQGLLISSQEWETKAQAVLKDKGNDVLIEVDKLLAEAAAINAYLPTEEYLFDAINKARDWLRLQEDMNSAEYYPYYDDMEELVKKGRALPLYLVEVNRLSCYLESAYIWKEKTSRVFLRKNSSVTLIEALCPRNYITPPKQKKKEKDDQDPLFEAGDPISIVTAFKQAEEKEMDLMRNLKKDNSLKSLDPNDCASFCTCQRGAFGLMMQCELCKDWFHSVCVQLPKIATASFKGNFTIAAMHFGFKDCKFLCPNCCRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARNLLQNSELEVAKTMLNNFHKRFIEAAAKQRTEEIISSELKKACKNPDLQQKVTEIAHKSGVGKLQESSGESDDSKECTSSSLQEDHIDEHAYSLHLPKINEDEFRVQISADLNQQISELLMEGDLLEVHLDETLQLWKLLQSTRNPEKDPILIDFDQQSLSIPVKRGRKRRSEECEAARKLKSVKANLSKKPGDKKVCEKREKPARKKKTEKSKEKKSAESDEEDEDDIYATCAAANCQVPTGNVDWVQCDGGCELWFHMACVGLSAGDINEDEDYICILCSQVFENLNTNESSRSNSPPSPDSTQPSTSKDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348609;
90% Identity
iTF_01023625;
80% Identity
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