Basic Information

Gene Symbol
Kdm5
Assembly
GCA_958510865.1
Location
OY294057.1:78703705-78708405[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-23 6.5e-20 72.5 0.0 2 89 107 190 106 190 0.95
2 2 0.72 3.9e+03 -0.5 0.0 31 84 1219 1271 1204 1274 0.74

Sequence Information

Coding Sequence
ATGACTTGTATGAAGTTAGGATCACCTAGCTGTTCAAAATCTGAATCAGGATATAAACATGAATCTGATCAACTTTTCAAAGATGAAGGTTTTGAATTCACTGTACCCCAAGAAGTTCCAGTCTTTCATCCTACTGAGGAAGAGTTTGCAGATCCCTTAgcatatattggaaaaattcgccCAATTGCTGAAAACACTGGTATATGCAAAATAAAGCCCCCTCCTAACTGGCAGCCTCCATTTGCTGTTGATGTAGACAAATTAAGGTTCACACCTAGAATTCAACGTTTGAACGAATTGGAAGCCAAGACTAGGATAAAACTAAATTTTCTAGATCAGATAGCTAAATTTTGGGAATTACAAGGGTCTTCTCTTAAAATTCCCATGGTTGAGAAGAGAGCACTAGATTTATATACATTACATAGAGTTGTGCAATTAGAAGGTGGATTTGAACTGGCTTCAAGAGAACGAAGATGGTCTAAGATTGCTATTCGTCTTGGTTATCCTCCAGGCAAAAGTGTTGGTACCATTTTGAAGCAACATTATGAGAGACTACTTTACCCATTTGATGTATTTAAACAAGGAAAAGCTCCAATCAAAGTTGATCCAGATGTTCCTGAACGTAATGAAAAAACAGACAAAGACTATAAACCACATGGTATTGTTGGCAGAATGGCTATCAAACCACCTTGTGAGAAAGCAAGAAGGTCAAAGAGATTCGAAAATCAGAATAATGAtgaggaaaaaccaaaaattgaggatgatgatgatgatgctGATAGTAAAGAACTTAAAAGACTGCAAATCCATGGGGCTGGACCTAAGATGGCCGGATATAACGATAAGAAGAAAAGATCCAAGAATTTGAACACAGAATTTGATCCCTTAGCTAAATATGTTTGTCATAATTGTAGTAGAGGAGATTCAGAGGAATTTATGTTATTGTGTGATGGCTGCGATGATAGCTATCATACCTTTTGTCTCATGCCACCATTGTCGGACGTACCAAAAGGAGACTGGCGATGTCCCAAATGCGTAGCTGAAGAAGTTTCCAAACCAATGGAGGCATTCGGTTTCGAACAGGCCCAGAGAGAGTACACATTACAGCAATTCGGCGAAATGGCTGATCAGTTtaaatctgaatatttcaatatgcCTGTTCACATGGTTCCGTTAACTACAGTTGAAAAGGAATTTTGGAGAATTGTTTCTTCAATCGATGAAGATGTTACAGTTGAGTATGGTGCGGATTTACACACAATGGACCATGGGTCAGGATTTCCGACCAAGACTTCCATTAATCTATACCCTGGAGATAAGGAATATGCCGATTCAGGCTGGAATTTGAATAATCTGCCTGTACTTGAAGGATCCGTGTTAGGTTATATTAATGCAGATATATCGGGTATGAAGGTGCCTTGGATGTATGTAGGGATGTGTTTCGCGACTTTCTGTTGGCATAATGAAGACCATTGGAGCTATTCCATCAATTATTTGCACTGGGGAGAAGCCAAAACATGGTATGGAGTACCAGGTAGCAAAGCTGAACTCTTCGAGGAAACTATGAAATCTGCAGCACCCGAATTGTTCCATTCGCAACCCGATCTACTACATCAACTGGTAACTATAATGAACCCAAATGTTTTAATGAATGCCGGAGTTCCAGTTTACCGCACAGATCAATGTGCTGGAGAATTCGTAGTAACATTCCCCAGGGCTTACCACGCAGGATTCAACCAAGGTTATAACTTTGCTGAAGCAGTTAATTTCGCACCCGCAGATTGGCTCAGGATGGGCAGAGAGTGTGTTCTTCATTATTCCCACTTGAGAAGATTCTGCGTGTTCTCACATGACGAACTTGTATGTAAAATGGCTCTCGTTCCGGATAAATTGGATATTACTATAGCCGCAGCCACATACCAAGATATGTTGCATATGGTCGATACTGAAAAGAAACTTCGTAAAAACTTATTAGAATGGGGAGTGACTAATGCTGAGAGAGAAGCTTTCGAGCTGCTTCCAGACGATGAGAGACAGTGCGAAATATGCAAAACTACATGTTTCTTATCTGCATTAACTTGTACCTGTACAAACGTTCTAGTTTGTTTAAGACATTTCGAAGATTTATGCAAATGTAATCCAGCTGCACATACTTTAAGATATCGTTACACTCTGGACGAATTACCCGTAATGTTAAAAGGTCTAAAGTTGAAAGCAGAGTCTTTTGATCACTGGGTGAACAGAGTGAAAGACGCTCTGGATCCCAACACTCCTAAATCTTTATCACTGACTGAATTGAAAGCGTTGTTAAACGAAGCAAACGGTAAGAAATTCCCAAAATCCGATCTACTCCAAACTCTAACAAACGCTGTGGTTGATGCAGAAAAATGCGCCAGCGTGATCCACCAACTGGACTTGAACAAAATAAGGACCAGAACTAGAAATTCCACTGATAACAAGTATAAACTAACAATCGAGGAACTAACTTTGTTCTGTGAAGAACTAGATAGTTTAGCTTGCCATTTGGATGAAAGTAAGAACATCAAGATGTTACTGCAACAAACAAAAGCTTTCGAAAAAGAAAGTAGGAGGTTGCTgcatttgaaactttcagattgtgTCCTTTCGGAATTAGAAAATTGTTATAGTCTGGGTAACTCTCTTTGCATAGAACTACCGGCTTTGAAACAAATTGCTGTGAGAACTAAACAAACTGCGTGGTTGAAAGACGTACTTTCTTACAAAAAAAGATCCGAGGTACTGGCAATAGATTCCATCAACAGTTTGATCAAGGGAGGAATGGATCTTCCTCCTCATCCTGAAATGGAGGAAGAACTATCAATTCTTCAAGGCCTACTGCTCGCCAGTCAGGAGTGGGAGACGAAAGCTCAAGCGGTATTGAAAGACAAAGGGAACGACGTTCTTATCGAAGTTGATAAACTCCTGGCAGAAGCAGCGGGTATCAATGCTTACCTTCCGACTGAAGAATATTTGTTCGATGCAATTAATAAAGCCAGAGATTGGCTCCGACTGCAAGAGGATATGAATTCTGCGGAATATTATCCCTACTACGAAGACATGGACGAGTTGGTCAAAAAAGGACGATCTTTACCTCTGTATCTGGTGGAAGTTAACCGCTTATCTTGCTATCTGGAATCAGCTTACTTATGGAAAGAAAAAACCAGCAGGGTATTCCTTCGAAAGAATTCCTCGGTGACCCTCATTGAAGCATTGAGCCCTAGAAACTACATAACCCCACCGAAACAAAAGAAGAAAGAAAAGGACGATCAAGATCCCATCTTTGAGAACGGAGACCCCTTTTCCATAGTGTCTGCCTTCAAGCAAGCCGAAGATAAGGAAATGGAATTAATGAGAAATTTAAGAAAAGACAATTCTGCCAAAAGTTTGGACCCCAACGATTGTGCCTCCTTCTGTACGTGCCAAAGGGGAGCATTTGGGCTCATGATGCAATGCGAACTTTGCAAGGATTGGTTTCATTCGGTTTGTGTTCAACTGCCGAAAATTGCTACTACGAGTTTTAAGGGTAATTTCACAACAGCAGCAATGCATTATGGATTTaaagactgcaaatttttgTGCCCTAACTGTTGTAGGACTAAACGACCGAGATTGGATGTTATTCTCGGTTTATTGATGtcactacaaaaattatattGCCGGTTACCTGAAGGTGAAGCTCTGCAATGTCTGACAGAGAGAGCCATGAACTGGCAAGATAGAGCAAGAAATTTATTACAAAATCCCGAATTGGAAACTGTTAAAACAATGTTGAGTAACTTCCATAAAAGATTCATGGAAGCAGCAGCCAAACAAAGAACCGAAGAAATTATCTCTAGTGAACTGAAAAAAGCCTGTAAGAATCCAGATTTACAACAGAAGGTAACTGAAATTGCTCACAAGAGCGGGGTTGCCAGTAACCTGCAAGAATCCTCTGGTGAATCTGACGATTCCAAGGAGTGTACGTCAAGTTCACTTCAAGAAGATCCCATAGACGAACATGCATACAGTTTACATCTACCCAAGATCAACGAAGATGAACTAAGGGTACATATAAGTGCTGATTTGAACCAGCAAATATCAGAGTTGTTGATGGAAGGAGATTTGCTTGAAGTGCACCTAGATGAAACCTTGCAGCTATGGAAATTTCTTCAGGCTACCAGAAACCCAGAAAAAGAAGCTATTCTTATTGATTTCGATCAACAATCTCTGTCCACCCCAGTCAAAAGGGGTAGAAAGAGAAGATCGGAAGAATGTGAAGCTGCTAGAAAATTGAAGAACGTGAAGACAAATCTTCAAACTAAAAAGCCCACAGAGAAAAAGATACGAGAGAAAAGGGAGAAACCAGGAAGGAAGAAGAATACCAGTGAGAAGTCGAAGCAAAAGAAATCTGCAGAGTCTGATGACGAGGAAGAAGATGACATCTATGCCACTTGTGCTGCGGCTAGCTGTCAGGTTCCGACTGGAAATGTAGACTGGGTGCAGTGTGATGGTGGATGCGAGCTCTGGTTCCATATGGCTTGTGTGGGACTTTCCGCAGGGGACATAAACGAAGATGAGGACTACATATGTATGTTGTGTTCCCAAGTGTTTGAGAACCTGAATCCTAATGAAAGCAGTAGGTCAAATAGTCCCCCATCACCGGATTCGACGCAGCCTTCAACTTCCAAAGATActaattaa
Protein Sequence
MTCMKLGSPSCSKSESGYKHESDQLFKDEGFEFTVPQEVPVFHPTEEEFADPLAYIGKIRPIAENTGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRVVQLEGGFELASRERRWSKIAIRLGYPPGKSVGTILKQHYERLLYPFDVFKQGKAPIKVDPDVPERNEKTDKDYKPHGIVGRMAIKPPCEKARRSKRFENQNNDEEKPKIEDDDDDADSKELKRLQIHGAGPKMAGYNDKKKRSKNLNTEFDPLAKYVCHNCSRGDSEEFMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPLTTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSINLYPGDKEYADSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNVLMNAGVPVYRTDQCAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALVPDKLDITIAAATYQDMLHMVDTEKKLRKNLLEWGVTNAEREAFELLPDDERQCEICKTTCFLSALTCTCTNVLVCLRHFEDLCKCNPAAHTLRYRYTLDELPVMLKGLKLKAESFDHWVNRVKDALDPNTPKSLSLTELKALLNEANGKKFPKSDLLQTLTNAVVDAEKCASVIHQLDLNKIRTRTRNSTDNKYKLTIEELTLFCEELDSLACHLDESKNIKMLLQQTKAFEKESRRLLHLKLSDCVLSELENCYSLGNSLCIELPALKQIAVRTKQTAWLKDVLSYKKRSEVLAIDSINSLIKGGMDLPPHPEMEEELSILQGLLLASQEWETKAQAVLKDKGNDVLIEVDKLLAEAAGINAYLPTEEYLFDAINKARDWLRLQEDMNSAEYYPYYEDMDELVKKGRSLPLYLVEVNRLSCYLESAYLWKEKTSRVFLRKNSSVTLIEALSPRNYITPPKQKKKEKDDQDPIFENGDPFSIVSAFKQAEDKEMELMRNLRKDNSAKSLDPNDCASFCTCQRGAFGLMMQCELCKDWFHSVCVQLPKIATTSFKGNFTTAAMHYGFKDCKFLCPNCCRTKRPRLDVILGLLMSLQKLYCRLPEGEALQCLTERAMNWQDRARNLLQNPELETVKTMLSNFHKRFMEAAAKQRTEEIISSELKKACKNPDLQQKVTEIAHKSGVASNLQESSGESDDSKECTSSSLQEDPIDEHAYSLHLPKINEDELRVHISADLNQQISELLMEGDLLEVHLDETLQLWKFLQATRNPEKEAILIDFDQQSLSTPVKRGRKRRSEECEAARKLKNVKTNLQTKKPTEKKIREKREKPGRKKNTSEKSKQKKSAESDDEEEDDIYATCAAASCQVPTGNVDWVQCDGGCELWFHMACVGLSAGDINEDEDYICMLCSQVFENLNPNESSRSNSPPSPDSTQPSTSKDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348609;
80% Identity
-