Basic Information

Insect: Ceratosolen solmsi
Gene Symbol: -
Assembly: GCA_000503995.1
Location: NW:203579-210103[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.7 1.6e+02 2.1 6.1 2 23 250 272 249 272 0.96

2 20 0.23 14 5.5 5.8 1 23 345 367 345 367 0.97

3 20 0.00041 0.025 14.1 0.3 1 23 416 438 416 438 0.97

4 20 0.014 0.85 9.3 0.4 1 20 493 512 493 514 0.93

5 20 0.0031 0.19 11.4 3.6 2 23 555 576 554 576 0.97

6 20 0.00047 0.028 13.9 0.1 1 23 619 641 619 641 0.97

7 20 0.00027 0.016 14.7 0.1 1 23 647 669 647 669 0.97

8 20 8.9e-05 0.0053 16.2 4.9 1 23 709 732 709 732 0.95

9 20 0.00021 0.013 15.0 0.3 2 23 740 762 739 762 0.96

10 20 0.0001 0.0062 16.0 0.6 2 19 796 813 795 818 0.89

11 20 0.00023 0.014 14.9 1.5 1 23 849 871 849 871 0.93

12 20 0.024 1.5 8.6 0.1 2 20 929 947 928 947 0.95

13 20 0.00052 0.031 13.8 0.2 2 23 966 987 965 987 0.97

14 20 0.00022 0.014 15.0 2.8 1 23 1012 1034 1012 1034 0.97

15 20 0.0061 0.37 10.5 4.4 2 21 1054 1073 1054 1077 0.89

16 20 0.067 4.1 7.2 0.2 2 23 1136 1158 1135 1158 0.93

17 20 0.048 2.9 7.6 2.2 3 23 1188 1209 1186 1209 0.88

18 20 0.0023 0.14 11.8 1.2 1 23 1216 1240 1216 1240 0.95

19 20 0.035 2.1 8.1 2.5 1 23 1245 1268 1245 1268 0.94

20 20 0.005 0.3 10.7 0.4 3 23 1300 1321 1298 1321 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.7	1.6e+02	2.1	6.1	2	23	250	272	249	272	0.96
2	20	0.23	14	5.5	5.8	1	23	345	367	345	367	0.97
3	20	0.00041	0.025	14.1	0.3	1	23	416	438	416	438	0.97
4	20	0.014	0.85	9.3	0.4	1	20	493	512	493	514	0.93
5	20	0.0031	0.19	11.4	3.6	2	23	555	576	554	576	0.97
6	20	0.00047	0.028	13.9	0.1	1	23	619	641	619	641	0.97
7	20	0.00027	0.016	14.7	0.1	1	23	647	669	647	669	0.97
8	20	8.9e-05	0.0053	16.2	4.9	1	23	709	732	709	732	0.95
9	20	0.00021	0.013	15.0	0.3	2	23	740	762	739	762	0.96
10	20	0.0001	0.0062	16.0	0.6	2	19	796	813	795	818	0.89
11	20	0.00023	0.014	14.9	1.5	1	23	849	871	849	871	0.93
12	20	0.024	1.5	8.6	0.1	2	20	929	947	928	947	0.95
13	20	0.00052	0.031	13.8	0.2	2	23	966	987	965	987	0.97
14	20	0.00022	0.014	15.0	2.8	1	23	1012	1034	1012	1034	0.97
15	20	0.0061	0.37	10.5	4.4	2	21	1054	1073	1054	1077	0.89
16	20	0.067	4.1	7.2	0.2	2	23	1136	1158	1135	1158	0.93
17	20	0.048	2.9	7.6	2.2	3	23	1188	1209	1186	1209	0.88
18	20	0.0023	0.14	11.8	1.2	1	23	1216	1240	1216	1240	0.95
19	20	0.035	2.1	8.1	2.5	1	23	1245	1268	1245	1268	0.94
20	20	0.005	0.3	10.7	0.4	3	23	1300	1321	1298	1321	0.95

Sequence Information

Coding Sequence: ATGGACGACGTTGTAGAGATCAGCGGCTTGGAAAATGCCTGCAGATTGTGTCTTACTACCGAGCAAACGAGGTCCTCGATTTTTGGCGTGCCGCACGTATCTGTGCCCTTCGTCGAAAAAATTCGCGCCTGTTTGTCAATACAGATTTCATCCCATGATAAACTATCAACTTTAGTATgtacaaattgtataaaaaatataaaccaaTGGTATTCTTACAAGGATATTTGCCTGCAGTCGCAGGAGAAACTTCAACAATGGTTTGCAAAACAAAGTACAACTGTTCAAccAGTTGTGACTGTAAAAGAAGAACCAGTAGATGTAGAATTTCCAGATGACAATCCACATATTACAAATGcaaatcatCATGCTGTGTTAAATGATAAGAATATGGATGTTGATagtgaaagtaatattataccaattataaataagattattcagGGATCACCAgatgaaattctaaaaatgaatgaaaaaatagacaAAGATCATACTGTAatgattcaaattaaaagtgaACCTGTAGATACAGAAGACGAAGATGACTGTAATGTAGATGTTGAATCTGTTAATAGTGgagaacttttaattaatccaaTGGCAGTAGTGGCCAATACAGGTAATAATGATAGAATCATGGAGGCTGATTCAACTCAAAAATTTAGTACCAGGAGGTTTGGAACGAAAAAGAGAATGCGACGTGGTCCGCATACTCATTACAGGGgtattcgattatttaagaaaaagtgtGTTcactgtaaaatttatttacattctaaGTACTCTTATACTCAACACATGTCTAGATACCAtggaattgttaataatttatctgtaGATTTTATGAAACCTCCAAATCAACCATCaatgaagaaacaaaaatcaaaactGTCTTTTCACACAGAGAATACAGAACCTATTACAGATacacaaaatgaaattaatagtgAAGATTTGGAATTTGAGAAGATGATAAAAACTGATCCTCTAATACCAGTGCAAAAGACTATCATTAGTCAGTTAAAGACTTTTTCTTGTTATTCTTGTAAACAAACCTTTTTCGACCGCAGACATACTTTGAATCATATTCGTCAGCACATGCCCGATTTAAGACCATTCACTTGCATTGCTTGTCTTACCGAATTTTCCGATAGATCCATGTATAAACTTCATTGTGGGGCCTCGTTTGAATGTGCTATGAAAATAGCTCTTGTAGTCCCGAAAGTTGgtaatgagaaatatttcaCCTGTAACATGTGTCTTCGACCGTTTGATAATCGTAAAGAGCTTCTTACACACTTAGCCATACATGCTGATAAACAATACCAACAATTGGCTCAACCTTTAAGGTCACCGCCGAAATTGAAACCAATAAATCCATCTCCACCAACTCCTAAAATTGATTCATCACCAATTAAAAAACCTATTGTTAATGTTTCCGGACCTTATATGAATGGTGATCCAGCTCATAATCATATGTGTGATCTATGTGGTATGATTTATAGGTATAAACCTAATATGTTCAAACATCGCGAGCTTTGTTCTACTTTACCTGAGAACATCAGAACCTCGTATAGATGCATTCATTGTAATATGACGTATCTCGTGTATAAGAAGTTCTATACACATGTATTGCATGATCATAAAAAACGTGAAATTACTTGTTTTACGTGTCACGAAAAATTTACTACCCCTGATGATTATCTTAGCCATCATGAGACGCATCGTGTCCGTTTAGATAAGGAAAACGTTAAGGAAACATCAAATGAACAACAGCCAAATAACGAGTTTTCGATAACAGTGAATCCGTTGAATTCAGTCATACATCCAATGGACGTTAATGACAAGCCCTTCAATTGCGCCCTTTGCGGCGAAGACTTTGCTACGAAAATAGAGCTTACAGAACATCGAAACCTTCATCTCAAAGTAAAAATCTATTCGTGCGTTATTTGCCGAAGTATGTTCAGTAGTTCGGGAGCTCTTGAAGTGCATATGAAGGACCACGGAATAGAGGATCCAGGTGAACAAAATGCCAATAGCTCATGCGTTGAATATGGACGTCAAAGTCGATCACAGACCGCGATGAATGACTCCTCCACCTCAGATCCTGGTGGATGCTTCCATCACTGTTATGAGTGTAATAAGAACTTTTCCAACCTTGCAAATCTAAAGAGACACGAACGAAATTTGCACTCCAAGCAAAGGCGTCGCTGGAGTTGTGATGATTGCAAAAGGCGATTCAAGTCAGTCGAAGCTTATAATGAACATGTGAGAACGGAACACGGGTCAacgcagcaacaacagcaccTTGAAAAAGTACCGGTTATGCCGCCGCCTCCGCCACCACCGCAATTATCTTCGAGTACCGGCAAGCCACTGATGCAATGTCCAAAATGTCCCAAAACTTTTGCTTATCAAGGAAATCTCATCATTCACTGCCAAAATGTCCACAAAGAGAATCACTTTGAACGTGCGCGAGCGAACGCAGCGCGACCTACCGCTCCATCTTCTCGGCACACCTCAACCATTTCGTCTTGGGGCCACTCGTGTGATCTCTGCGGCAAAACTTTCCGCGAGGAACAATCCCTCAAGACCCACCGGGGTTGGCACCTTCGATCGACCTATCGTCTTAAGGTGGACAAGAACGCGAGTCTCGACGAGACAACGCTTAGTGGTCCGGGCTACACAATGACTATGACGAGCTCATCGAAACCTGCCAAGGCACGCAAGTCCTTCCCCAACAACCCAACCCAGAAGCAGCTTGGTACAATCGCGAATCTACAATGCCAGGTCTGTGACGATCGTTTTACGGACGTTGCTGAACTGAGAAAGCACCTCTGGGACGTACATTGCGCTCGCAACAAACCCGAAAAGTCTTTTACGAGTGAGCTGCAGTGCGAGCTTTGTACTAACAAGTTTCCCGATGAGGAGTCTCTAGAGAACCATATGAAATGGCACTCGCAGAATCCGATCCTTAGCGGTAACAATGCCAGTGGTACAACCAGTAGCTTCGAGGCTCCCACAAAAACTTTCTACTGCGACATTTGTGGCAAGTATTACAGTAATCGCAAACTCTACCTGCGCCACAAGAAGCTTCACAAGGTCCTCCCTGCAACGACAATGATGAATCTCCAGTCGCTTCAAACGAAGCGGCCCTATTGTCATTCCTGCCAAAAGAGCTTTTCAACGGATGCATCCCTTAAACGACATAAAGCCTCGCCCTGTCATCATAGTGTCGTACGCATTCAGAATCAGCATGGCTCCAAGAAAATAACGACAACCGCCCTGGTACATCAGCCACCATCAGAGCCTATGAGGTTGCAGGCGGTGAAGAGGGAGCCGGGTCTGGAGTATGCATCAGCGAGCCAATTGGGTGGCCATGGCTCTAAGAGGAAGCCGGTCACTTGTCTCATCTGCAAGACTATGTTCCCGAACATGAGCGTGCTCTATCAGCATAAGCAGCTCGTGCATAAACTGCCGACAAGCGGTAGAGACAGGGCTAATAGCCAGCAGCAGGCCGAGTGCGTGCCCCTGGTGAGTGCCGAAGGCCTCGTCTGTTGTAATCTCTGTGGCAAGCAGTTCCCTGGCGTACCAAACCTTAAGCAGCATTTTGCTCACAAACATAAGACCAAGAGCGCCACTTTTCCCTGCAGGTCGCTCGGCTGTAAGCTCGTATTCAGCAGTGCGCACTCCCTTAAGAGTCATGAAACAACGCACTCGAGCATGATATACAATTGCCACTTATGCGACGGCCATGTGTTTTCTAGAGCTGCCATGACTAAGCACATGATGACCATGCACAAAGCAATTTACCAATCGGGTGCGAGCAAAAGTAGTCTTTGGTCGGAGACCGATCTCACGACTTATAATGTGAAGAACTGCCAGAGCACTGCTTGTCCAAAATGCAAGATCAAGTATCCCAATTTGAGAGCCCTAAAGATTCACTACCTTAAGTTCCATGAGAAATCATAG
Protein Sequence: MDDVVEISGLENACRLCLTTEQTRSSIFGVPHVSVPFVEKIRACLSIQISSHDKLSTLVCTNCIKNINQWYSYKDICLQSQEKLQQWFAKQSTTVQPVVTVKEEPVDVEFPDDNPHITNANHHAVLNDKNMDVDSESNIIPIINKIIQGSPDEILKMNEKIDKDHTVMIQIKSEPVDTEDEDDCNVDVESVNSGELLINPMAVVANTGNNDRIMEADSTQKFSTRRFGTKKRMRRGPHTHYRGIRLFKKKCVHCKIYLHSKYSYTQHMSRYHGIVNNLSVDFMKPPNQPSMKKQKSKLSFHTENTEPITDTQNEINSEDLEFEKMIKTDPLIPVQKTIISQLKTFSCYSCKQTFFDRRHTLNHIRQHMPDLRPFTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKVGNEKYFTCNMCLRPFDNRKELLTHLAIHADKQYQQLAQPLRSPPKLKPINPSPPTPKIDSSPIKKPIVNVSGPYMNGDPAHNHMCDLCGMIYRYKPNMFKHRELCSTLPENIRTSYRCIHCNMTYLVYKKFYTHVLHDHKKREITCFTCHEKFTTPDDYLSHHETHRVRLDKENVKETSNEQQPNNEFSITVNPLNSVIHPMDVNDKPFNCALCGEDFATKIELTEHRNLHLKVKIYSCVICRSMFSSSGALEVHMKDHGIEDPGEQNANSSCVEYGRQSRSQTAMNDSSTSDPGGCFHHCYECNKNFSNLANLKRHERNLHSKQRRRWSCDDCKRRFKSVEAYNEHVRTEHGSTQQQQHLEKVPVMPPPPPPPQLSSSTGKPLMQCPKCPKTFAYQGNLIIHCQNVHKENHFERARANAARPTAPSSRHTSTISSWGHSCDLCGKTFREEQSLKTHRGWHLRSTYRLKVDKNASLDETTLSGPGYTMTMTSSSKPAKARKSFPNNPTQKQLGTIANLQCQVCDDRFTDVAELRKHLWDVHCARNKPEKSFTSELQCELCTNKFPDEESLENHMKWHSQNPILSGNNASGTTSSFEAPTKTFYCDICGKYYSNRKLYLRHKKLHKVLPATTMMNLQSLQTKRPYCHSCQKSFSTDASLKRHKASPCHHSVVRIQNQHGSKKITTTALVHQPPSEPMRLQAVKREPGLEYASASQLGGHGSKRKPVTCLICKTMFPNMSVLYQHKQLVHKLPTSGRDRANSQQQAECVPLVSAEGLVCCNLCGKQFPGVPNLKQHFAHKHKTKSATFPCRSLGCKLVFSSAHSLKSHETTHSSMIYNCHLCDGHVFSRAAMTKHMMTMHKAIYQSGASKSSLWSETDLTTYNVKNCQSTACPKCKIKYPNLRALKIHYLKFHEKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01216966; iTF_00708104; iTF_00708682; iTF_00464145; iTF_00845403; iTF_01524189; iTF_00304596;
90% Identity: iTF_00304596;
80% Identity: -