Ever009374.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHALOE00000269:69628-75072[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.9 2.1e+02 2.1 6.1 2 23 253 275 252 275 0.96 2 20 0.044 3.2 7.9 3.6 1 23 348 370 348 370 0.97 3 20 0.00042 0.03 14.2 0.3 1 23 419 441 419 441 0.98 4 20 0.015 1.1 9.3 0.4 1 20 496 515 496 517 0.93 5 20 0.003 0.22 11.5 3.5 2 23 558 579 557 579 0.97 6 20 0.0014 0.1 12.6 0.1 1 23 622 644 622 644 0.97 7 20 0.00029 0.021 14.7 0.1 1 23 650 672 650 672 0.97 8 20 1.1e-05 0.00082 19.1 2.0 1 23 712 735 712 735 0.95 9 20 0.00023 0.017 15.0 0.3 2 23 743 765 742 765 0.96 10 20 0.00011 0.008 16.0 0.6 2 19 793 810 792 815 0.89 11 20 0.00025 0.018 14.9 1.5 1 23 846 868 846 868 0.93 12 20 0.085 6.2 7.0 0.0 2 20 926 944 925 944 0.95 13 20 0.00056 0.04 13.8 0.2 2 23 963 984 962 984 0.97 14 20 0.0011 0.078 12.9 3.6 1 23 1010 1032 1010 1032 0.97 15 20 0.01 0.74 9.8 2.9 3 21 1053 1071 1052 1075 0.89 16 20 0.13 9.5 6.4 0.2 2 23 1132 1154 1131 1154 0.93 17 20 0.013 0.95 9.5 3.6 3 23 1185 1206 1183 1206 0.90 18 20 0.0018 0.13 12.2 0.9 1 23 1213 1237 1213 1237 0.93 19 20 0.057 4.2 7.5 2.0 1 23 1242 1265 1242 1265 0.94 20 20 0.0055 0.39 10.7 0.4 3 23 1297 1318 1295 1318 0.95
Sequence Information
- Coding Sequence
- ATGGACGACGTCGTGGAGATTAGTGGCTTGGAAAATGCCTGCAGGTTGTGTCTTACCATTGAGCAAACTAGGTCGTCGATTTTCGGCGTGCCGCACGTATCTATTCCCTTTGTCGACAAGATTCGTGCATGTTTGTCAATACAGATTTCATCCAATGATAAAATGTCAACCCTTGTATGTACATCTTGTATAAAAAATATAAATCAATGGTATTCTTACAAAGATACATGTCTACGATCTCAGGAAAAGCTACAACAATGGTTAGCAAAACAGAATACAATTGTTCAACCAATGGTGACTGTAAAAGAAGAGCCAGTTGATGTAGAATTTCCAGATGATAATCCTCAGATTATAACCAATGAATCTAATATGACTAATCATGTTGCTTTGAATGGTGAAAGTATGGATATAGATAGTGAAACTAATATTACATTTTCTAAAAATAATGTAATTCAAGCATTACCAGAACAACCTTCAAAAATAAATGAAAAAATTGATAAAGATCATTCATCACTGATTCAAATTAAAACTGAACCAGTAGATACAGAAGATGAAGATGATGCCAATGTAGATGTTGAATCTGTTAACAGTGGAGAACTCTTAATCAACCCAATGGCAGTAGTAGCCAGTACTGGCAATAATGATAGAATAATGGAGGCTGATTCAACCCAAAAATTTAGTACACGAAGGTTTGGAAAAAAAAGAATGCGACGTGGACCGCATACACATTATAGGGGTATTAGGTTATTCAAAAAAAAATGTGTTCACTGTAAAATTTATTTGCATTCTAAATATTCGTATACGCAACATATGTCCAGATATCATGGAATAGTTAATAATTTAAATAATGATTTTGTGAAACCTTCAAATCAGCCTCTAATAACAAAACAAAAATCAAAACTCTCTTTTCATACAGATAATATGGAATCTGTTACTGATACTGTAAATGATATTAATCACGAAGACTTAGAATTTGAGAAAATGATAAAAACTGATCCTCTTATACCAGTTCAAAAGACAATCATTAGTCAGTTAAAGACCTTCTCCTGTTATTCATGTAAACAAACCTTCTTTGATCGAAGAAATACTTTAAATCATATCAGACAACACATGCCTGATCTACGGCCATTTACTTGTATTGCTTGTCTCACAGAATTTTCAGATAGGTCCATGTATAAACTTCATTGTGGTGCTTCATTTGAATGTGCCATGAAAATAGCACTTGTAGTCCCAAAAGTGGGTAATGAAAAATATTTTACTTGTAATATGTGTCTTCGTCCTTTCGATAATCGAAAAGAACTACTTACACATTTAGCTGTACATGCAGATAAACAATATCAGCAGTTAGCTCAACCCTTAAGATCTCCACCCAAATTAAAACCAATAGTACCACCTCCTATACCAACTCCTAAAGTTGATTCTTCACCAGTCAAAAGATCTGTCAATGTATCTGGACCATATATGAATGGTGATCCTGCTCATAATCATATGTGTGATCTGTGTGGTATGATATACAGGTACAAACCTAACATGTTCAAACATCGTGAACTCTGTTCTACCTTACCTGAAAATATCAGAACCTCCTATAGATGCATTCATTGTAATATGACGTATCTTGTTTACAAGAAATTCTATACACATGTATTACATGATCATAAGAAGCGCGAAATTACTTGTTTCACATGTCATGAGAAATTTTCTACTCCTGATGACTATCTTAGTCATCATGAGACACATCGTATTCACATAGATAAAGAAAATACAAATGAAACTGCCAATGAATTACAGCCAAATGAAGAATACTCAATGATTGTAGATCCTTTAAATTCATCTACACATCCTATGGATGTGAGTGAGAAGCCTTTTAATTGTGCCCTTTGTGGCGAGGATTTCGCTACAAAGATTGAACTTAGTGAGCATCGTAATCTTCACTTGAAAGTAAAAATTTACTCATGTGTTATTTGTCGTAGCATGTTTAGTAGTTCAGGAGCTCTTGAAGTACATATGAAGGATCATGGAATTGAAGATCCTGGAGAGCAGAATGCTAATAGCTCATGCGTTGAATATGGACATGACAATCGTACGCAAACTGCAATAAATGAATCATCTGCATCGGATCCTGGTGGATGTTTCCATAATTGCCGTGAATGTGGTAAAAATTTCTCCAATGTTGCGAATTTAAAAAGACATGAAAGAAATTTGCATTCCAAGCAGAGGCGCCGTTGGAGTTGTGACGACTGTAAGAGACGATTTAAGTCTGTTGAAGCTTATAATGAACATGTAAGAACTGAACACGGACCAGCGCAGCAGCAACAGCATATTGAAAAAACATTACCACCACCTCAACTGTCTTCAAGTACTGGTAAACCATTGATGCAGTGTCCGAAGTGCCCAAAGACGTTTGCTTATCAGGGTAATCTTATCATTCATTGTCAAAATGTTCATAAGGAGAATCATTATGAACGTGCACGAGCAAATGCAGCCCGTCCTGTGGCAACTCCTCCTCGACCTACTTCTAACATTACACCTTGGGGTCATTCTTGTGATCTTTGTGGTAAAACCTTTCGAGAAGAACAATCCCTCAAAACTCATAGAGGCTGGCATCTTCGCTCTACCTATCGCCTTAAGGTAGATAAGAATACAAGTTTAGATGAGACAACACTCAGTGGTCCAGGATACACAATGACAATGACAAGTACAGCAAAACCTGCTAAAGCGCGTAAATCTTTCCCAAACCAACCTCCTCAAAGACAGCTTAGCAATATTACAAGTTTACAATGTCAAGTTTGCGATGATCGTTTTCCTGATGTTGCTGAGTTGAGAAAACATCTCTGGGATGTCCATTGCGCTAGAAATAAACCTGAGAAATCTTTTACAAGTGAATTGCAGTGTGAGCTTTGCACCAACAAATTTCCTGATGAAGAGTCTCTAGAAAACCACATGAAGTGGCACTCGCAGAATCCAATACTCAGTGGTAGTAGTGCCGGTGGTGAAAGTCGGATTGGCCTTGAAGCACCAACCAAGTCATTTTATTGTGATACTTGTGGCAAATACTACAGCAATCGCAAGCTTTACTTACGTCACAAGAAACTTCACAAAGTTTTACCTCCTTCGACAATGATGAATCTTCAATCATTACAAACAAAACGGCCCTTCTGTCAATCTTGTCAGAAGAGCTTTTCAACGGATGCCTCCCTTAGACGACATAAAGCATCGCCATGTCATCATAGTGTTGTACGAACTCAGAGCCAGCATGGATCCAAGAAGATAACGACAACGGCAATGATCCACCATCCTCCCTCAGAACCGGTGAGACTGCAGGCAGTCAAAAAAGAACCCGGTCTCGAGTATACAAGTCATGGAAACGTACCAAGTACGAGGAAAAAGCCAGTTACCTGTCTTATATGCAAAACCATATTTCCAAATATGAGTGTACTTTATCAGCATAAACAATTGGTGCACAAGCTACCGACTAGCGGAAGAGACAGAGCCAACAGCCAACATCAGCAGGCCGAATGCGTGCCTTTGGTGAGTGCCGAGGGACTTGTATGTTGTAACCTTTGTGGCAAGCAGTTCCCCGGTGTTTCGAATTTGAAGCAGCATTTTTCCCACAAACATAAGGCAAAAAATTCCACCTTCCCTTGTAGATCACCAGGCTGTAAGCTTGTATTTAGTAGCGCCCATTCACTTAAAAGCCACGAAACGACGCATACTAGTATGATATACAATTGTCATCTTTGCGATGGTCATGTATTTTCAAGAGCTGCAATGACAAAACACATGATAACTATGCATAAAGCCATCTATCAGTCAGGAGCGAATAAAACTAATCTTTGGTCCGAAACTGACTTGACGACTTATAATGTGAAAAATTGCCAGAGTACCGCCTGTCCTAAGTGCAAAATTAAATATCCAAATTTAAGGGCGTTAAAGATTCATTATCTTAAGTTCCATGAAAAAACATAA
- Protein Sequence
- MDDVVEISGLENACRLCLTIEQTRSSIFGVPHVSIPFVDKIRACLSIQISSNDKMSTLVCTSCIKNINQWYSYKDTCLRSQEKLQQWLAKQNTIVQPMVTVKEEPVDVEFPDDNPQIITNESNMTNHVALNGESMDIDSETNITFSKNNVIQALPEQPSKINEKIDKDHSSLIQIKTEPVDTEDEDDANVDVESVNSGELLINPMAVVASTGNNDRIMEADSTQKFSTRRFGKKRMRRGPHTHYRGIRLFKKKCVHCKIYLHSKYSYTQHMSRYHGIVNNLNNDFVKPSNQPLITKQKSKLSFHTDNMESVTDTVNDINHEDLEFEKMIKTDPLIPVQKTIISQLKTFSCYSCKQTFFDRRNTLNHIRQHMPDLRPFTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKVGNEKYFTCNMCLRPFDNRKELLTHLAVHADKQYQQLAQPLRSPPKLKPIVPPPIPTPKVDSSPVKRSVNVSGPYMNGDPAHNHMCDLCGMIYRYKPNMFKHRELCSTLPENIRTSYRCIHCNMTYLVYKKFYTHVLHDHKKREITCFTCHEKFSTPDDYLSHHETHRIHIDKENTNETANELQPNEEYSMIVDPLNSSTHPMDVSEKPFNCALCGEDFATKIELSEHRNLHLKVKIYSCVICRSMFSSSGALEVHMKDHGIEDPGEQNANSSCVEYGHDNRTQTAINESSASDPGGCFHNCRECGKNFSNVANLKRHERNLHSKQRRRWSCDDCKRRFKSVEAYNEHVRTEHGPAQQQQHIEKTLPPPQLSSSTGKPLMQCPKCPKTFAYQGNLIIHCQNVHKENHYERARANAARPVATPPRPTSNITPWGHSCDLCGKTFREEQSLKTHRGWHLRSTYRLKVDKNTSLDETTLSGPGYTMTMTSTAKPAKARKSFPNQPPQRQLSNITSLQCQVCDDRFPDVAELRKHLWDVHCARNKPEKSFTSELQCELCTNKFPDEESLENHMKWHSQNPILSGSSAGGESRIGLEAPTKSFYCDTCGKYYSNRKLYLRHKKLHKVLPPSTMMNLQSLQTKRPFCQSCQKSFSTDASLRRHKASPCHHSVVRTQSQHGSKKITTTAMIHHPPSEPVRLQAVKKEPGLEYTSHGNVPSTRKKPVTCLICKTIFPNMSVLYQHKQLVHKLPTSGRDRANSQHQQAECVPLVSAEGLVCCNLCGKQFPGVSNLKQHFSHKHKAKNSTFPCRSPGCKLVFSSAHSLKSHETTHTSMIYNCHLCDGHVFSRAAMTKHMITMHKAIYQSGANKTNLWSETDLTTYNVKNCQSTACPKCKIKYPNLRALKIHYLKFHEKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305786;
- 90% Identity
- iTF_00708104;
- 80% Identity
- -