Basic Information

Insect: Ceratosolen corneri
Gene Symbol: -
Assembly: GCA_030522565.1
Location: JAPYYT010000201.1:5471-11073[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.1 7.5e+02 2.1 6.1 2 23 249 271 248 271 0.96

2 20 0.35 64 5.5 5.8 1 23 344 366 344 366 0.97

3 20 0.00062 0.11 14.1 0.3 1 23 415 437 415 437 0.97

4 20 0.021 3.9 9.3 0.4 1 20 492 511 492 513 0.93

5 20 0.0068 1.2 10.8 3.3 3 23 555 575 553 575 0.96

6 20 0.0019 0.35 12.6 0.1 1 23 618 640 618 640 0.95

7 20 0.0004 0.074 14.7 0.1 1 23 646 668 646 668 0.97

8 20 0.00013 0.024 16.2 4.9 1 23 708 731 708 731 0.95

9 20 0.00032 0.059 15.0 0.3 2 23 739 761 738 761 0.96

10 20 0.00015 0.028 16.0 0.6 2 19 818 835 817 840 0.89

11 20 0.00035 0.065 14.9 1.5 1 23 871 893 871 893 0.93

12 20 0.036 6.7 8.5 0.1 2 20 951 969 950 969 0.95

13 20 0.0044 0.8 11.4 0.2 2 23 988 1009 987 1009 0.97

14 20 0.00038 0.07 14.8 2.9 1 23 1030 1052 1030 1052 0.97

15 20 0.0091 1.7 10.4 4.4 2 21 1072 1091 1072 1095 0.89

16 20 0.18 33 6.3 0.2 2 23 1154 1176 1153 1176 0.93

17 20 0.072 13 7.6 2.2 3 23 1206 1227 1204 1227 0.88

18 20 0.0025 0.45 12.2 0.9 1 23 1234 1258 1234 1258 0.93

19 20 0.052 9.6 8.1 2.5 1 23 1263 1286 1263 1286 0.94

20 20 0.0076 1.4 10.7 0.4 3 23 1318 1339 1316 1339 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.1	7.5e+02	2.1	6.1	2	23	249	271	248	271	0.96
2	20	0.35	64	5.5	5.8	1	23	344	366	344	366	0.97
3	20	0.00062	0.11	14.1	0.3	1	23	415	437	415	437	0.97
4	20	0.021	3.9	9.3	0.4	1	20	492	511	492	513	0.93
5	20	0.0068	1.2	10.8	3.3	3	23	555	575	553	575	0.96
6	20	0.0019	0.35	12.6	0.1	1	23	618	640	618	640	0.95
7	20	0.0004	0.074	14.7	0.1	1	23	646	668	646	668	0.97
8	20	0.00013	0.024	16.2	4.9	1	23	708	731	708	731	0.95
9	20	0.00032	0.059	15.0	0.3	2	23	739	761	738	761	0.96
10	20	0.00015	0.028	16.0	0.6	2	19	818	835	817	840	0.89
11	20	0.00035	0.065	14.9	1.5	1	23	871	893	871	893	0.93
12	20	0.036	6.7	8.5	0.1	2	20	951	969	950	969	0.95
13	20	0.0044	0.8	11.4	0.2	2	23	988	1009	987	1009	0.97
14	20	0.00038	0.07	14.8	2.9	1	23	1030	1052	1030	1052	0.97
15	20	0.0091	1.7	10.4	4.4	2	21	1072	1091	1072	1095	0.89
16	20	0.18	33	6.3	0.2	2	23	1154	1176	1153	1176	0.93
17	20	0.072	13	7.6	2.2	3	23	1206	1227	1204	1227	0.88
18	20	0.0025	0.45	12.2	0.9	1	23	1234	1258	1234	1258	0.93
19	20	0.052	9.6	8.1	2.5	1	23	1263	1286	1263	1286	0.94
20	20	0.0076	1.4	10.7	0.4	3	23	1318	1339	1316	1339	0.95

Sequence Information

Coding Sequence: ATGGACGACGTTGTAGAAATTAGCGGCTTGGAAAATGCCTGCAGGTTGTGTCTTACCACTGAGCAAACGAGGTCCTCAATTTTTGGCGTGCCGCACGTATTTGTGCCATTCGTCGAAAAGATTCGCGCCTGCTTGTCAATACAGATTTCATCCCATGATAAGCTATCGATCTTAGTATGTACAAAttgtatcaaaaatataaatcaatggtATTCTTACAAAGATATTTGCCTAAGGTCACAGGAGAAACTTCAACAATGGTTCGCAAAACAAAATACAACTGTTCAAcCAGTTACTGTAAAAGAAGAACCAGTAGATGTGGAATTTCCAGATGACAATCCACGTATGACAAATGCAaataatcatACTGCATCAAACGATAAAAATATGGATATCTATAGTGACAGTAATATTAcaccaattataaataagattattccAGGATTACCAGAAGAAATTCCAAAATTGAACGAAAAAATAGACAAAGACCATACTCTAATGATTCAAATTAAAAGTGAACCTGTAGACACAGAAGACGAAGATGATTGTAATGTAGATGTTGAATCTGTTAATAGTGgtgaacttttaattaatccaaTGGCTGTAGTAGCCAGTGCAGGTAATAACGATAGAATAATGGAGGCAGATTCAACTCAAAAATTCAGTACCAGGAGGTTTGCAACAAAAAAGAGAATGCGTCGTGGGCCTCATACACATTACAGGGGTATtcgattatttaagaaaaagtgTGTTcactgtaaaatttatttacattctaaGTACTCATACACCCAACATATGTCTAGATATCAtggaattgttaataatttatctggAGATTTTGTGAAACCTCCCAATcaaacattaatgaaaaaacaaaaatcaaaactGTCTTTCCACACAGAGAATACAGAACCTATTACTGATGCGCAAAATGAAACTAATAGCGAAGACTTAGAATTTGAAAAGATGATAAAAACTGATCCTCTAATTCCAGTTCAAAAGACTATTATTAGCCAGTTAAAGACTTTTTCCTGTTATTCTTGTAAACAAACATTTTTTGACCGAAGACATACTTTGAATCATATTAGACAGCACATGCCCGATTTAAGGCCATTCACTTGCATTGCTTGTCTTACCGAATTTTCCGATAGGTCCATGTACAAACTGCATTGTGGGGCTTCATTTGAATGCGCTATGAAAATAGCTCTTGTAGTTCCAAAAGTTggtaatgagaaatattttaccTGTAACATGTGTCTCCGGCCGTTTGACAATCGCAAAGAGCTTCTTACACACTTAGCCATACACGCTGACAAACAATACCAACAATTGGCTCAACCTTTAAGGTCACCGCCGAAATTAAAACCAATAAATCCATCTCCATCAGTTCTTAAAGATGATTCGACACCAAGTAAGAAGCCCATTGTCAGTGTTTCTGGACCTTATATGAATGGTGATCCAGCCCATAATCATATGTGTGATCTATGTGGCATGATTTATAGGTATAAACCTAATATGTTCAAACATCGCGAGCTTTGTTCTACTTTACCTGAAAACATCAGAACCTCATATAGATGTATTCATTGTAACATGACCTATCTCGTGTATAAGAAGTTCTATACACATGTATTTCACGATCATAAAAAGCGTGAAATTATCTGTTTTACGTGCCACCAGAAATTTACTACTCCCGACGACTATCTTAGTCATCACGAGACGCATCGTGTTCGTTTAGATAAGGAAAACGTTAAGGAAACGTCAAATGAACAAGAACCAAATAAGGAGTTTTCGATGATAGTAAGTCCTATAAATTCATCCATACATCCTATGGACATTAGTGAGAAGCCCTTCAATTGTGCTCTTTGTGGCGAAGATTTTGCTACAAAAATAGAACTTACAGAACATCGAACCCTACATCTGAAAGTAAAAATCTATTCGTGCGTTATTTGTCGTAGTATGTTCAGTAGTTCGGGAGCTTTAGAAGTGCATATGAAAGATCACGGAATCGAGGATCCAAGTGAACAAAATGCCAATAGCTCGTGGGTTGAATATGGACGTCAAAGTCGATCACAGACCGTGGTGAATGACTCCTCCACCTCGGATCCTGGTGGATGCTTCCATCATTGCTATGAATGTAATAAGAACTTCTCCAACCTTGCGAATTTAAAGAGACATGAACGAAATTTGCACTCCAAGCAAAGACGTCGCTGGAGTTGCGATGATTGTAAGAGGCGCTTCAAATCAGTCGAAGCTTATAATGAACACGTGAGAACGGAACATGGCTCAACGCAGCAACAACAGCATATTGAAAAAGTATCGGTTATGctaccaccgccgccgccgccaccaccaccaccaccaccaccaccaccaccaccaccatcacaaccaccaccaccaccaccaccacgaccacaGTTGTCCTCGAGTACCGGCAAGCCACTAATGCAATGTCCAAAATGTCCCAAAACTTTTGCTTATCAAGGAAACCTCATCATTCACTGCCAAAACGTCCACAAGGAGAATCACTTTGAACGCGCGCGAGCGAACGCAGCACGACCCGCCCCTCCATTTTCTCGTCATACCTCAAACATTTCGTCTTGGGGCCATTCTTGTGATCTCTGTGGCAAGACCTTCCGTGAGGAGCAATCCCTCAAAACCCACCGTGGTTGGCACCTTCGATCGACTTACCGTCTCAAGGTAGATAAGAACATCAGCCTAGACGAGACGACGCTCAGTGGCCCGGGCTACACGATGACCATGACGAGTTCCTCGAAACCTGCCAAGGCACGCAAGTCCTTCCCCAACAACCCTACCCAGAAGCAGCTGGGTACGATCGCAAATCTGCAATGCCAGGTCTGTGATGATCGCTTCACGGACGTTGCCGAACTAAGAAAACACCTCTGGGACGTACATTGCGCTCGCAACAAGCCTGAAAAGTCCTTTACGAGTGAGTTGCAGTGCGAGCTCTGTACCAATAAGTTTCCCGATGACGAATCCCTAGAGAGCCACATGAAATGGCATTCGCAGAATCCGATCCTCGGAGGTAATAGTGCCGGTGTTTTCGAGACCCCTACAAAGACCTTCTACTGCGACATTTGTGGCAAGTATTACACTAATCGCAAACTCTACCTGCGTCACAAGAAGCTTCACAAGGTCCTGCCCGCAACGACAATGATGAATCTCCAGTCGCTCCAAACTAAGCGGCCCTACTGCCACTCCTGTCAGAAGAGCTTCTCAACAGACGCATCTCTCAAACGGCACAAGGCCTCGCCGTGTCATCATAGCGTTGTTCGCATTCAGAATCAGCATGGCTCCAAAAAGATAACGACAACGGCGTTGGTACATCAGCCGCCTTCGGAACCCATGAGGTTACAGGCGGTCAAAAGAGAGCCGGGTCTGGAATATGTGTCCGCGAGCCAACTGGGTGGCCATGGCTCTAGGAGGAAGCCAGTCACCTGTCTCATCTGCAAGACCATATTCCCGAACATGAGCGTGCTCTACCAGCACAAACAGCTCGTACATAAGCTGCCGACGAGCGGTAGGGACAGGGCCAATAGCCAGCAGCAAGCCGAGTGCGTGCCTCTAGTGAGCGCGGAGGGCCTTGTTTGCTGTAATCTTTGCGGCAAGCAGTTCCCTGGCGTGCCAAACCTCAAGCAACATTTTGCCCATAAACATAAGACTAAGAGCGCCACGTTCCCCTGCAGATCACCCGGCTGTAAACTCGTCTTCAGCAGTGCACACTCTCTCAAAAGTCATGAAACAACGCACTCGAGCATGATATACAACTGCCATTTGTGCGACGGCCACGTGTTTTCTAGGGCCGCTATGACTAAACACATGATGACCATGCATAAGGCAATTTACCAATCGGGTGCAAACAAAAGTAGCCTTTGGTCCGAGACCGATCTCACGACTTACAACGTAAAGAACTGCCAAAGCACTGCTTGTCCTAAGTGCAAGATCAAGTATCCCAATTTGAGAGCCCTAAAGATTCACTACCTTAAGTTCCACGAGAAAACATAG
Protein Sequence: MDDVVEISGLENACRLCLTTEQTRSSIFGVPHVFVPFVEKIRACLSIQISSHDKLSILVCTNCIKNINQWYSYKDICLRSQEKLQQWFAKQNTTVQPVTVKEEPVDVEFPDDNPRMTNANNHTASNDKNMDIYSDSNITPIINKIIPGLPEEIPKLNEKIDKDHTLMIQIKSEPVDTEDEDDCNVDVESVNSGELLINPMAVVASAGNNDRIMEADSTQKFSTRRFATKKRMRRGPHTHYRGIRLFKKKCVHCKIYLHSKYSYTQHMSRYHGIVNNLSGDFVKPPNQTLMKKQKSKLSFHTENTEPITDAQNETNSEDLEFEKMIKTDPLIPVQKTIISQLKTFSCYSCKQTFFDRRHTLNHIRQHMPDLRPFTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKVGNEKYFTCNMCLRPFDNRKELLTHLAIHADKQYQQLAQPLRSPPKLKPINPSPSVLKDDSTPSKKPIVSVSGPYMNGDPAHNHMCDLCGMIYRYKPNMFKHRELCSTLPENIRTSYRCIHCNMTYLVYKKFYTHVFHDHKKREIICFTCHQKFTTPDDYLSHHETHRVRLDKENVKETSNEQEPNKEFSMIVSPINSSIHPMDISEKPFNCALCGEDFATKIELTEHRTLHLKVKIYSCVICRSMFSSSGALEVHMKDHGIEDPSEQNANSSWVEYGRQSRSQTVVNDSSTSDPGGCFHHCYECNKNFSNLANLKRHERNLHSKQRRRWSCDDCKRRFKSVEAYNEHVRTEHGSTQQQQHIEKVSVMLPPPPPPPPPPPPPPPPPPSQPPPPPPPRPQLSSSTGKPLMQCPKCPKTFAYQGNLIIHCQNVHKENHFERARANAARPAPPFSRHTSNISSWGHSCDLCGKTFREEQSLKTHRGWHLRSTYRLKVDKNISLDETTLSGPGYTMTMTSSSKPAKARKSFPNNPTQKQLGTIANLQCQVCDDRFTDVAELRKHLWDVHCARNKPEKSFTSELQCELCTNKFPDDESLESHMKWHSQNPILGGNSAGVFETPTKTFYCDICGKYYTNRKLYLRHKKLHKVLPATTMMNLQSLQTKRPYCHSCQKSFSTDASLKRHKASPCHHSVVRIQNQHGSKKITTTALVHQPPSEPMRLQAVKREPGLEYVSASQLGGHGSRRKPVTCLICKTIFPNMSVLYQHKQLVHKLPTSGRDRANSQQQAECVPLVSAEGLVCCNLCGKQFPGVPNLKQHFAHKHKTKSATFPCRSPGCKLVFSSAHSLKSHETTHSSMIYNCHLCDGHVFSRAAMTKHMMTMHKAIYQSGANKSSLWSETDLTTYNVKNCQSTACPKCKIKYPNLRALKIHYLKFHEKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00305786;
90% Identity: iTF_00305786;
80% Identity: -