Basic Information

Insect: Cataglyphis hispanica
Gene Symbol: -
Assembly: GCA_004195275.1
Location: SGAY01002356.1:1-7595[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.61 78 4.8 0.4 6 20 296 310 295 312 0.94

2 9 1.1e-06 0.00014 22.8 2.5 1 23 549 571 549 571 0.98

3 9 2.7e-05 0.0034 18.5 2.0 1 23 577 599 577 599 0.98

4 9 1.7e-06 0.00021 22.3 0.3 2 23 608 629 608 629 0.98

5 9 5.5e-05 0.007 17.5 0.1 3 23 637 657 635 657 0.97

6 9 1.7e-07 2.2e-05 25.4 3.0 1 23 663 685 663 685 0.98

7 9 3.7e-06 0.00047 21.2 2.1 1 23 691 713 691 713 0.98

8 9 4.5e-05 0.0058 17.7 7.4 1 23 719 741 719 741 0.98

9 9 0.0004 0.051 14.8 1.4 1 21 747 767 747 768 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.61	78	4.8	0.4	6	20	296	310	295	312	0.94
2	9	1.1e-06	0.00014	22.8	2.5	1	23	549	571	549	571	0.98
3	9	2.7e-05	0.0034	18.5	2.0	1	23	577	599	577	599	0.98
4	9	1.7e-06	0.00021	22.3	0.3	2	23	608	629	608	629	0.98
5	9	5.5e-05	0.007	17.5	0.1	3	23	637	657	635	657	0.97
6	9	1.7e-07	2.2e-05	25.4	3.0	1	23	663	685	663	685	0.98
7	9	3.7e-06	0.00047	21.2	2.1	1	23	691	713	691	713	0.98
8	9	4.5e-05	0.0058	17.7	7.4	1	23	719	741	719	741	0.98
9	9	0.0004	0.051	14.8	1.4	1	21	747	767	747	768	0.94

Sequence Information

Coding Sequence: GAGGTATTGTTGGCTCATAGCAAGGCCACCGTTCATTGTGAGCCGATTACGGTGATCCTGGCTGAAATGGAAGCGCCGGAACTCGCGGCTCTTCTCGGCTTCGTGTACACCGGAAGTGCGACGGTTCCGCGAGTGCGACTGGACGCGTTTCTACGTGCTGCCGAGACCCTACGAATTCGATTGCCACCGGTGCCAGTGACGACGACTTGCGCCGAGCGAGTACAAGCGAACTGTAAACTGGAGGATGTGAAGGACATCAAAGTTAATCCCAAGTACCTGCGATGCAATCAGTACCCTTGGTACAGATCGGGGAGACTGTCCTATGAAGATCCGCTCGACAGAAAAGAGTCCAGGATATTCCCAACGGAGGACAACAGAACTGTCTTCAGGGATGTCGGGACGCTTCGTGAAATCAACAATCCTGGTCCCAGCTCTTTTGATCCAAGTCCGAACGGATGGCCAATTGATGGTTTCGCATACCAGGACAGCGCTGCTGATGCTTCCGCAGAGAAAGATCACAGCTCAGTGATAATCGCCGATAAAAATCGCATGATAGCTCCTAATAGCGAATCGTCCTTCGATGTTTATCAGCGAGACGCTTGTCTTCCTGATAGATCATTCGCCGAAGGATACGGTAATTTGGATCCTTCGGAGAGAATCAGAATATCGGGGTACGAGAGATCGCAGATGAATCGTTCCACGGAGAAGCCGATGGCGAACGAGGACGTTCACGCGGCAGGATCGGGAGGCGATTCTTACGGAAGGACACGCGACGAATGTCCCTGGGGGCACCAGGGCACAATGCCGTCCTTGCATTGTCGGACAAGGACGTTCGAGAGGACGACCGATTACGGTTCGCAGACGGCGGCGGGCGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCGTCCGCAGACACGTGGCCAATCGCGTCACCGCGTCGCCGTGGCGCCAGATTATCAGGCCTCATCATTCACCGAGAACCCCGCGGTCCGTCGTACCCCAACGTCACGTCGATGACGAAATTCAGAAGAAGCCTCTAACTCCAGAACCAATTCGATCTACGGTAATATCGATGAGCCCGAAGGTCCATTCCCCAATTAGGAATACGCAGAGAAATGATGGATTCTACGCTGTCGAAGTTCCTACTAATTGCGAGATGAGCTTAAATGATACGAGATCGCGCGAGGTAATCGGTGGTCCAGAGACCACAAACATGCAGGAGATCTATCGATCTCCACCAGCTTCATTCGTACCTTGCAATCAAATCGCGTCGCCTGCGAGCACGTTGAGAAGTGACGAACCACCCTTTCAAAACGTCAGCACCACACCTAGTGTAGCGCGATTGTTACCCGCCATTAATGAAAGCGTTATCACGAATTCCGGCGGACACACGACGTCGATTCCGGTTGCGCAGACGCCGCAGAAACACGAACTGTCACTTCCGATCAGCAGACTTTGCGACACGGTCGAGTCTGACGAAAAGATGGAATCTTCGAGGGTGGAGATGGCGAACACGGAGAAGAATGAGGAGGAGAGCATCGCGAGGATTCTTGTTAATAgtgataataacaataacaacgaGACGATCATCAGCACGATCGGCGTGGCTCAACGCGAACGAACGGTCGACGATCACAGATGCGATCAGTGCGGAAAGACCTTCGTCACGAGAGCCTCGCTcaagGTGCACAGCCGAACACACTCCGGCGAGAAGCCGTTTCGCTGCGCCGATTGCGGCAAGCAGTTCTCGCAGCTGCGCAACTACAAGTATCACCGCAGCGTGCACGAGGGCACGCGGGAGTTTGCCGCGACTTGTCCGGAATGCGGCAAGTACTTCAACGATCGCGGTTACCTGAGCTCGCACATGAAGATCCATCGGAATCGCAAGGAATACGGATGCGCGGAATGTGGGAAGAGCTTCAACCAGCGCGTGGCCTACAACATGCACGTGCGCATACACACGGGTGTAAAACCGCATCAGTGCGAGCAATGCGGCAAGGCGTTTTCGCGGAAGATGCTGCTCAAGCAACATCTCAGGACCCATTCCGGCGAGCGGCCGTACCAGTGCCAGGTCTGCCACAAAGCGTTCGCCGATCGCTCCAACATGACCCTCCACACCAGGCTACACTCCGGCCTGAAGCCCTACCAGTGCAACCTGTGCTCCAAGGCCTTTACCAAGAAGCACCACCTCAAGACTCACCTTAACTATCATACTGGTACTAAGCCGTACTCCTGCTCCAACTGCGGCGGCAGGTTCTCGCAGAGTAGCAACATGAGGACTCACTTCAAGAAGTGTATCGTTAACAACGCCGTCGGATTAATCAAGTCCGGCGACGAGACTAGAGTCGATCGCGTCGATCGCGTCGATGCCGAAGGCAACGTAGCGCCGCAAATGGCCTTGACGCCGCCTAACTCCGATCAGGAGTCCAGCATCCTGACGCCGATACAGGGCAACACGTAG
Protein Sequence: EVLLAHSKATVHCEPITVILAEMEAPELAALLGFVYTGSATVPRVRLDAFLRAAETLRIRLPPVPVTTTCAERVQANCKLEDVKDIKVNPKYLRCNQYPWYRSGRLSYEDPLDRKESRIFPTEDNRTVFRDVGTLREINNPGPSSFDPSPNGWPIDGFAYQDSAADASAEKDHSSVIIADKNRMIAPNSESSFDVYQRDACLPDRSFAEGYGNLDPSERIRISGYERSQMNRSTEKPMANEDVHAAGSGGDSYGRTRDECPWGHQGTMPSLHCRTRTFERTTDYGSQTAAGEDLSCGESCCRWRTVRRHVANRVTASPWRQIIRPHHSPRTPRSVVPQRHVDDEIQKKPLTPEPIRSTVISMSPKVHSPIRNTQRNDGFYAVEVPTNCEMSLNDTRSREVIGGPETTNMQEIYRSPPASFVPCNQIASPASTLRSDEPPFQNVSTTPSVARLLPAINESVITNSGGHTTSIPVAQTPQKHELSLPISRLCDTVESDEKMESSRVEMANTEKNEEESIARILVNSDNNNNNETIISTIGVAQRERTVDDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCHKAFADRSNMTLHTRLHSGLKPYQCNLCSKAFTKKHHLKTHLNYHTGTKPYSCSNCGGRFSQSSNMRTHFKKCIVNNAVGLIKSGDETRVDRVDRVDAEGNVAPQMALTPPNSDQESSILTPIQGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730246; iTF_00730193; iTF_00729466; iTF_00729531; iTF_01245395; iTF_01245394; iTF_00110009; iTF_01077676; iTF_01077601; iTF_00869011; iTF_00868289; iTF_00869079; iTF_00867580; iTF_00867642; iTF_01255004; iTF_01254938; iTF_00264446; iTF_00264487;
90% Identity: -
80% Identity: -