Basic Information

Insect: Lasius niger
Gene Symbol: zbtb24
Assembly: GCA_001045655.1
Location: LBMM01003320.1:968-11130[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.4 43 4.8 0.4 6 20 259 273 258 275 0.94

2 9 7.2e-07 7.7e-05 22.9 2.5 1 23 511 533 511 533 0.98

3 9 1.8e-05 0.0019 18.6 2.0 1 23 539 561 539 561 0.98

4 9 1.1e-06 0.00012 22.4 0.3 2 23 570 591 570 591 0.98

5 9 3.6e-05 0.0039 17.6 0.1 3 23 599 619 597 619 0.97

6 9 1.1e-07 1.2e-05 25.4 3.0 1 23 625 647 625 647 0.98

7 9 2e-06 0.00021 21.6 0.7 1 23 653 675 653 675 0.98

8 9 3e-05 0.0032 17.8 7.4 1 23 681 703 681 703 0.98

9 9 0.00023 0.025 15.0 1.4 1 21 709 729 709 730 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.4	43	4.8	0.4	6	20	259	273	258	275	0.94
2	9	7.2e-07	7.7e-05	22.9	2.5	1	23	511	533	511	533	0.98
3	9	1.8e-05	0.0019	18.6	2.0	1	23	539	561	539	561	0.98
4	9	1.1e-06	0.00012	22.4	0.3	2	23	570	591	570	591	0.98
5	9	3.6e-05	0.0039	17.6	0.1	3	23	599	619	597	619	0.97
6	9	1.1e-07	1.2e-05	25.4	3.0	1	23	625	647	625	647	0.98
7	9	2e-06	0.00021	21.6	0.7	1	23	653	675	653	675	0.98
8	9	3e-05	0.0032	17.8	7.4	1	23	681	703	681	703	0.98
9	9	0.00023	0.025	15.0	1.4	1	21	709	729	709	730	0.94

Sequence Information

Coding Sequence: ATGCGACTGGACGCGTTTCTACGCGCTGCCGAGACCCTGCACATTCGGCTGCCACCGGTGCCGGTGACGACGACCTGCGGCGAGCGAGTGCAAGCGAACGGTAAACTGGAGGACGTGAAGGACGTTAAAGTTAATCCCAAGTATCTGCGGTGCGATCAGTATCCTTGGTGCAAATCGGGGAGACCGTCCTACGAAGATCCGCTCGACAGGAAGGAGTCCAGGATATTCCCGACGGACGGCAACAGAGACGTCTTCAGGGACGCCGTGACGCTTCGCGAAGTCAACAATCCTGGCCCAAGCTCGTTTGGTCCAAGCTGTCCGAACGAGTGGCCAATCGATCACGGTTTCGCGTATCGGGATAGAGCGTTAGATGATGCTTCCGCGGAGAATCGAGATCACGGCTCGATGATACTCGCCGACAAAAATCGCATGATGGCTCCTAGCAGCGAATCGTCCTTCGATGTTTATCGGCGAGACGCGTGTCTGCCCGATAGACCGTTCGCGGAAGGATACGGTAGTCTGGAACCTTCGGAGAGGATCAGATTATCGGGATACGAGAGATCGCAGATGAGTCGGAGTTCGACGGAGAAGCCGATGACGGACGAGGACGTTCACGCGGCAGGATCGGGGGGTGACACTTACTCGGGAAGGACACCCGACGAGTGTCCCTACCAGGGCGCGATACCGCCCTCGCAGTGTCGGACAAGGTCGTTCGTGAGGACGACCGATTACGGTTCGcagacggcggcggcgacggcgggcGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCGTTCGCAGGCACGTGGCGAATCGCGTAACCGCGTCACCGTGGCGCCAGATTATCAGGCCTCATCATTCACCGAGAATCCCGCGATCCGTCATATCCCAACGTCACGTCGATGACGAAATTCAAAAGAAGCCTCTAACTCCAGAACCAACTCGATCCACGGTAATATCGATGAGCCCGAGGGTCCATTCACCGAGTAGGAATACGCCGAGAAACGACGGGTTTTACGCCGTCGAAGTTCCTACCAGTTGCGAGATGAGCTTTAACAATGATACGAGATCGTGCGAGATGGTCGGCGATGTTCCAGAGACGAGGATGCAGGAGATGTATCGATCCCCACCAGCCCCGTTCGCGCCCGGCAATCAACTCGCGCCGCTTGCGAGCGCGCCGAGGAGCAACGAACCACCCTTTCAGAATGTCAGCAACACGCCCACGCGATTGCTGGCCGCCGTTAACGATAGCGTTATCACGAATCCCGGCGGATATACGGCCCCGATTCCGATCCCGCAGACGACGCAGAAACACGAATTGTCGCATCCGATCAGCAGACTCTGCGACACGATCGAGCCCGACGAGAAGAGGGAATCCTCGAGGATGGAGATGGCGAACACGGAGAAGAGCGGGGAGGAGAGAATCGCGAGGATTCTTGTTAATAGCGataacaacaataacaacGAGGCGATCGTCAGCACGATCGAGGTGGCTCAGCGCGGACGACCGGCCGACGATCACAGGTGCGATCAGTGCGGAAAGACCTTCGTCACGAGAGCATCGCTCAAGGTGCACAGCCGAACGCACTCCGGCGAGAAGCCGTTCCGCTGCGCCGATTGCGGCAAACAGTTCTCGCAGCTGCGCAACTACAAGTATCACCGCAGCGTGCACGAGGGCACGCGGGAGTTCGCGGCGACCTGTCCGGAATGCGGCAAGTACTTCAACGATCGCGGTTACCTGAGCTCGCACATGAAGATCCATCGGAATCGCAAGGAGTACGGATGCGCGGAATGCGGCAAGAGCTTCAACCAACGCGTGGCCTACAACATGCACGTGCGCATACACACCGGCGTGAAGCCGCATCAGTGCGAGCAATGCGGCAAGGCGTTCTCGCGGAAGATGCTGCTCAAGCAACATCTGAGGACCCATTCCGGCGAACGGCCGTATCAGTGCCAGGTCTGCCAGAAGGCGTTCGCCGATCGCTCCAACATGACCCTCCACACCAGGCTGCACTCCGGCTTGAAGCCTTACCAGTGCAACCTGTGCTCGAAGGCCTTCACCAAGAAGCACCATCTCAAGACCCACCTCAACTATCATACCGGCACCAAGCCGTACTCCTGCACCAACTGCGGCGGCAGGTTCTCGCAGAGTAGCAACATGAGGACCCACTTCAAGAAGTGTATCGTCAACAACGCCGTAGGATTGGTCAAATCCGGCGACGAGACTGGCGTCGATGGCGTCGATCGCGCCGATGCCGAGGGCAACGTGGTCTTGACGCCGCCCAACTCCGATCAGGAGTCCAGCATCCTGACACCGATACAGAGCAACACGTAG
Protein Sequence: MRLDAFLRAAETLHIRLPPVPVTTTCGERVQANGKLEDVKDVKVNPKYLRCDQYPWCKSGRPSYEDPLDRKESRIFPTDGNRDVFRDAVTLREVNNPGPSSFGPSCPNEWPIDHGFAYRDRALDDASAENRDHGSMILADKNRMMAPSSESSFDVYRRDACLPDRPFAEGYGSLEPSERIRLSGYERSQMSRSSTEKPMTDEDVHAAGSGGDTYSGRTPDECPYQGAIPPSQCRTRSFVRTTDYGSQTAAATAGEDLSCGESCCRWRTVRRHVANRVTASPWRQIIRPHHSPRIPRSVISQRHVDDEIQKKPLTPEPTRSTVISMSPRVHSPSRNTPRNDGFYAVEVPTSCEMSFNNDTRSCEMVGDVPETRMQEMYRSPPAPFAPGNQLAPLASAPRSNEPPFQNVSNTPTRLLAAVNDSVITNPGGYTAPIPIPQTTQKHELSHPISRLCDTIEPDEKRESSRMEMANTEKSGEERIARILVNSDNNNNNEAIVSTIEVAQRGRPADDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCNLCSKAFTKKHHLKTHLNYHTGTKPYSCTNCGGRFSQSSNMRTHFKKCIVNNAVGLVKSGDETGVDGVDRADAEGNVVLTPPNSDQESSILTPIQSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280128;
90% Identity: iTF_00869079;
80% Identity: -