Basic Information

Insect: Lasius fuliginosus
Gene Symbol: ttk
Assembly: GCA_949152495.1
Location: OX424447.1:17769262-17793375[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.72 1.1e+02 4.7 0.4 6 20 361 375 360 377 0.94

2 9 1.3e-06 0.0002 22.7 2.5 1 23 613 635 613 635 0.98

3 9 3.2e-05 0.0048 18.4 2.0 1 23 641 663 641 663 0.98

4 9 2e-06 0.0003 22.2 0.3 2 23 672 693 672 693 0.98

5 9 6.5e-05 0.01 17.4 0.1 3 23 701 721 699 721 0.97

6 9 2.1e-07 3.2e-05 25.2 3.0 1 23 727 749 727 749 0.98

7 9 3.5e-06 0.00054 21.4 0.7 1 23 755 777 755 777 0.98

8 9 5.4e-05 0.0083 17.6 7.4 1 23 783 805 783 805 0.98

9 9 0.00042 0.064 14.9 1.4 1 21 811 831 811 832 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.72	1.1e+02	4.7	0.4	6	20	361	375	360	377	0.94
2	9	1.3e-06	0.0002	22.7	2.5	1	23	613	635	613	635	0.98
3	9	3.2e-05	0.0048	18.4	2.0	1	23	641	663	641	663	0.98
4	9	2e-06	0.0003	22.2	0.3	2	23	672	693	672	693	0.98
5	9	6.5e-05	0.01	17.4	0.1	3	23	701	721	699	721	0.97
6	9	2.1e-07	3.2e-05	25.2	3.0	1	23	727	749	727	749	0.98
7	9	3.5e-06	0.00054	21.4	0.7	1	23	755	777	755	777	0.98
8	9	5.4e-05	0.0083	17.6	7.4	1	23	783	805	783	805	0.98
9	9	0.00042	0.064	14.9	1.4	1	21	811	831	811	832	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAGGTGATTCGTGTTTCCGGGAGGGCACCGGACGTCGGTGACATCCTGAAGGAGGCCATGCTGTCGCAGAGATTCGCCGATGTGGCCCTGTGTTGTCCAGGAGGCCAGAGATTCCTCGCGCATCGTCTGGTGCTATCGGCAGCGAGTCCTTATCTCCAGGAGGTATTGTTGGCGCATAGCAAGGCCAGCGCTCATTGCGAGCCAATCACGGTGATCCTGGCTGAAACGGAAGCGCCGGAACTCGCGGCTCTTCTCGGCTTCGTCTACACCGGAAGCGCCACGGTTCCGCGGATGCGACTGGACGCGTTTCTACGCGCTGCCGAGACCCTGCACATTCGGTTGCCACCGGTGCCGATGACGACGACCTGTGGCGAGCGAGTGCAAGCGAACGGTAAACTGGAGGACGTGAAGGACGTTAAAGTTAATCCCAAGTATCTGCGGTGCGATCAGTATCCTTGGTGCAAATCGGGGAGACCGTCCTACGAAGATCCGCTCGACAGGAAGGAGTCCAGGATATTCCCGACGGACGACAACAGAAGGGACGTCTTCAGGGACGCCGTGACGCTTGGCGAAGTCAACCATCCTGGCCCAAGCTCGTTTGGTCCAAGCTGTCCGAACGAGTGGCCAATCGATCACGGTTTCGCGTATCGGGATAGAGCGTTAGATGATGCTTCCGCGGAGAATCGAGATCACGGCTCGATGATACTCGCCGACAAAAATCGCATGATGGCTCCTAGCAGCGAATCGTCCTTCGATGTTTATCGGCGAGACGCGTGTCTGCCCGATAGACCGTTCGCGGAAGGATACGGTAGTCTGGATCCTTCGGAGAGGATCAGATTATCGGGATACGAGAGATCGCAGATGAGTCGGAGTTCGACGGAGAAGCCGATGACGGACGAGGACGTTCACGCGGCAGGATCGGGAGGTGATGACACTTACTCGGGAAGGACACCCGACGAGTGTCCCTACCAGGGCGCGATACCGCCCTCGCAGTGTCGGACAAGGTCGTTCGTGAGGACGACCGATTACGGTTCGCagacggcggcggcgacggcgggcGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCGTTCGCAGGCACGTGGCGAATCGCGTAACCGCGTCACCGTGGCGCCAGATCATCAGGCCTCATCATTCACCGAGAATCCCGCGATCCGTCATATCCCAGCGTCACGTCGATGACGAAATTCAAAAGAAGCCTCTAACTCCAGAACCAACTCGATCCACGGTAATATCGATGAGCCCGAGGGTCCATTCACCGAGTAGGAATACGCCGAGAAACGACGGGTTTTACGCCGTCGAAGTTCCTACCAGTTGCGAGATGAGCTTTAACAATGATACGAGATCGTGCGAGATGGTCGGTGATGTTCCAGAGACGAGGATGCAGGAGATGTATCGATCTCCACCAGCCCCGTTCGCGCCCGGCAATCAACTCGCGCCGCTTGCGAGCGCGCCGAGGAGCAACGAAACACCCTTTCAGAATGTCAGCAACACGCCCGCGCGATTGCTGACCGCCGTTAACGATAGCGTTATCACGAATCCCGGCGGATATACGACCCCGATTCCGATCCCGCAGACGCCGCAGAAACACGAATTGTCGCATCCGATCAGCAGACTCTGCGACACGATCGAGTCCGACGAGAAGAGGGAATCCTCGAGGATGGAGATGGCGAACACGGAGAAGAGCGGGGAGGAGAGAATCGCGAGGATTCTTGTTAATAGCGATAACAACAATAACAACGAGGCGATCGTCAGCACGATCGAGGTGGCTCGGTGCGGACGACCGGCCGACGATCACAGGTGCGATCAGTGCGGAAAGACCTTCGTCACGAGAGCATCGCTCAAGGTGCACAGCCGAACGCACTCCGGCGAGAAGCCGTTCCGCTGCGCCGATTGCGGCAAACAGTTCTCGCAGCTGCGCAACTACAAGTACCACCGCAGCGTGCACGAGGGCACGCGGGAGTTCGCGGCGACCTGTCCGGAATGCGGCAAGTACTTCAACGATCGCGGTTACCTGAGCTCGCACATGAAGATCCATCGGAATCGCAAGGAGTACGGATGCGCGGAATGCGGCAAGAGCTTCAACCAACGCGTGGCCTACAACATGCACGTGCGCATACACACCGGCGTGAAGCCGCATCAGTGCGAGCAATGCGGCAAGGCGTTCTCGCGGAAGATGCTGCTCAAGCAACATCTGAGGACCCATTCCGGCGAACGGCCGTATCAGTGCCAGGTCTGCCAGAAGGCGTTCGCCGATCGCTCCAACATGACCCTCCACACCAGGCTGCACTCCGGCTTGAAGCCTTACCAGTGCAACCTGTGCTCTAAGGCCTTCACCAAGAAGCACCATCTCAAGACCCACCTCAACTATCATACCGGCACCAAGCCGTACTCCTGCACCAACTGCGGCGGCAGGTTCTCGCAGAGTAGCAACATGAGGACCCACTTCAAGAAGTGTATCGTCAACAATGCCGTAGGATTGGTTAAATCCGGCGACGAGATTGCCGTCGATCGCGCCGATGCCGAGGGCAACGTGGTCCTGACGCCGCCCAACTCCGATCAGGAGTCCAGCATCCTGACACCGATACAGAGCAACACGTAG
Protein Sequence: MMGEVIRVSGRAPDVGDILKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSKASAHCEPITVILAETEAPELAALLGFVYTGSATVPRMRLDAFLRAAETLHIRLPPVPMTTTCGERVQANGKLEDVKDVKVNPKYLRCDQYPWCKSGRPSYEDPLDRKESRIFPTDDNRRDVFRDAVTLGEVNHPGPSSFGPSCPNEWPIDHGFAYRDRALDDASAENRDHGSMILADKNRMMAPSSESSFDVYRRDACLPDRPFAEGYGSLDPSERIRLSGYERSQMSRSSTEKPMTDEDVHAAGSGGDDTYSGRTPDECPYQGAIPPSQCRTRSFVRTTDYGSQTAAATAGEDLSCGESCCRWRTVRRHVANRVTASPWRQIIRPHHSPRIPRSVISQRHVDDEIQKKPLTPEPTRSTVISMSPRVHSPSRNTPRNDGFYAVEVPTSCEMSFNNDTRSCEMVGDVPETRMQEMYRSPPAPFAPGNQLAPLASAPRSNETPFQNVSNTPARLLTAVNDSVITNPGGYTTPIPIPQTPQKHELSHPISRLCDTIESDEKRESSRMEMANTEKSGEERIARILVNSDNNNNNEAIVSTIEVARCGRPADDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCNLCSKAFTKKHHLKTHLNYHTGTKPYSCTNCGGRFSQSSNMRTHFKKCIVNNAVGLVKSGDEIAVDRADAEGNVVLTPPNSDQESSILTPIQSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280128;
90% Identity: iTF_00869079;
80% Identity: iTF_00867580;