Basic Information

Insect: Formica aserva
Gene Symbol: ttk
Assembly: GCA_037039905.1
Location: JAXRKO010000002.1:3183442-3205360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.71 1.4e+02 4.7 0.4 6 20 354 368 353 370 0.94

2 9 9.6e-07 0.00019 23.1 2.6 1 23 605 627 605 627 0.98

3 9 3.1e-05 0.0062 18.4 2.0 1 23 633 655 633 655 0.98

4 9 1.9e-06 0.00039 22.2 0.3 2 23 664 685 664 685 0.98

5 9 6.4e-05 0.013 17.4 0.1 3 23 693 713 691 713 0.97

6 9 2e-07 4.1e-05 25.3 3.0 1 23 719 741 719 741 0.98

7 9 3.5e-06 0.00069 21.4 0.7 1 23 747 769 747 769 0.98

8 9 5.3e-05 0.011 17.6 7.4 1 23 775 797 775 797 0.98

9 9 0.00046 0.093 14.7 1.4 1 21 803 823 803 824 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.71	1.4e+02	4.7	0.4	6	20	354	368	353	370	0.94
2	9	9.6e-07	0.00019	23.1	2.6	1	23	605	627	605	627	0.98
3	9	3.1e-05	0.0062	18.4	2.0	1	23	633	655	633	655	0.98
4	9	1.9e-06	0.00039	22.2	0.3	2	23	664	685	664	685	0.98
5	9	6.4e-05	0.013	17.4	0.1	3	23	693	713	691	713	0.97
6	9	2e-07	4.1e-05	25.3	3.0	1	23	719	741	719	741	0.98
7	9	3.5e-06	0.00069	21.4	0.7	1	23	747	769	747	769	0.98
8	9	5.3e-05	0.011	17.6	7.4	1	23	775	797	775	797	0.98
9	9	0.00046	0.093	14.7	1.4	1	21	803	823	803	824	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAGGTGATCCGTGTTTCTGGGAGGGCACCGGACGTCGGTGACATCCTGAAGGAGGCTATGCTGTCGCAGAGATTCGCCGACGTAGCCCTGTGTTGTCCAGGAGGCCAGAGATTCCTCGCGCATCGTCTGGTGCTATCAGCAGCGAGTCCTTATCTCCAGGAAGTATTGTTGGCGCATAGCAAGGCCACCGCTCATTGTGAGCCGATCACGGTGATCCTGGCTGAAATGGAAGCGCCGGAACTCGCGGCTCTTCTCGGTTTTGTCTACACCGGAAGTGCCACGGTTCCGCGGATGCGACTGGACGCGTTTCTACGCGCTGCCGAGACTCTACGGATTCGATTGCCACCGGTGCCGGTGACGACGATCTGCGCCGAGCGATCGCCAGCGGATTGTAAACTCGAAGACGTGAAGGACGTCAAAGTTAACCCCAAGTACCTACGATGCAATCAGTATCCTTGGTGCAGATCGGGGAGACTGTCCTACGAAGATCCGCATGACAGAAAGGAGTCCAGGATATTCCCGACGGAGGACAACAGAAACGTCTTCAGGGACATCGGGACGCTTCGTGAAATCAACCATCCTGGTCCCAGCTCGTTTGATCGAAACTGCCCGAGCGGATGGCCAATCGATAGTTTCGTATACCAGGATAGAACGATAGATGATGCTTCCATAGAGAAAGATCATCGCTCGGTGATAGTCGGCGATAAAAATCGAATGATAGCTCCTAGTAGCGAATCGTCCTTCGATGTTTATCAGCGAGACGCGTGTCTTCCTGATAGATCGTTCGCGGAACGATACGATAGTCTGGATCCTTCGGAGAGGATGAGAATATCGGGGTACGAGAGATCGCAGATGAATCGTTCGACGGAGAAGCCGATGACGGACGAGGACGTCCACGCGGCAGGATCGGGGGGCGACTCTTACGGAAGGATACGCGACGAGTGCCCCTACCAGGGCACAATGCCATCGTCGTCCTTGCAGTGTCGGACAAGGTCGTTCGAGAGGACGACCGATTACGGTTCGCAGACGGCGGTGGGCGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCGTCCGCAGACACGTGGCCAATCGCGTCACCGCGTCGCCGTGGCGCCAGATTATTAGGCCTCATCATTCACCGAGAACCCCAAGGTCCGTCGTACCCCAACGTCACGTCGATGACGGAATTCAAAAGAAGCCTCTAACTCCAGAACCAACTCGATCTACGGTAATATCGATGAGTCCGAAGGTCCATTCCCCGAGTAGGAATACGCCGAGAAACGATGGATTTTACGCTGTCGAAGTTCCTACCAATTGCGAGATGAGCTTTAATGATACGAGATCATGCGACATAGTCGGTGGTCCAGAGACAAACATGCAAGAGATCTATCGATCTCCACCAGCTTCATTCGCACCCTGCAATCAAATCACGCCGCCTGCGAGCGCGTTGAAAAGCAACGAACCACCCTTTCAAAATGTCAGCAACATGCCTAGTGTTGCGCGATTGCTGCCCGCCGTTAATGACAGCGTTATCACAAATACCGCCGGATACACGACGTCGATTCCGGTTCCGCAGACGCCGCAGAAACATGAATTGTCGCATCCGATCAGCAGACTCTGCGACACGATTGAGTCCGATGAGAAGAAGGAGTCTTCGAGGATGGAGATGGCGAACACGGAGAAGAATGAGGAGGAGAAGATCGCAGTTCTTGTTAATAGcgataataacaataacaacGAGACGATCGTCAACACGATCGATGTGGCTCAGCGAGGACGATCGGTCGACGATCACAAATGCGATCAATGCGGAAAGACCTTCGTCACGAGAGCCTCACTCaagGTGCACAGCCGAACACACTCCGGCGAGAAGCCGTTCCGCTGCGCTGATTGCGGCAAACAGTTCTCGCAACTACGCAACTACAAGTATCATCGTAGCGTGCACGAGGGCACGCGGGAGTTCGCCGCGACTTGTCCGGAATGCGGCAAGTACTTCAACGATCGCGGTTACCTGAGCTCGCACATGAAGATCCATCGGAATCGCAAGGAGTACGGCTGCGCGGAATGCGGGAAGAGCTTCAACCAGCGTGTGGCCTACAACATGCACGTGCGCATACACACGGGCGTGAAGCCGCATCAGTGCGAGCAATGCGGCAAGGCGTTCTCGCGGAAGATGCTGCTCAAGCAACATCTCAGGACCCATTCCGGCGAGCGGCCTTACCAGTGCCAGGTCTGCCAGAAAGCGTTCGCCGATCGCTCCAACATGACCCTCCACACCAGGCTGCACTCCGGCCTGAAGCCCTACCAGTGCAATCTGTGCTCGAAGGCCTTCACCAAGAAGCACCACCTCAAGACTCACCTCAACTACCATACTGGCACTAAACCGTACTCCTGCTCCAACTGCGGCGGCAGGTTCTCGCAGAGTAGCAACATGAGGACCCACTTCAAGAAGTGTATCGTCAACAACGCCGTCGGATTAATCAAATCCGGCGACGAAATCAGCGTCGATCGCCCCGATGCCGAGGGCAACGTGGCGCCGCAAATGGCCTTGACGCCGCCCAACTCTGATCAAGAGTCCAGCATCCTGACACCGATACAGGGCAACACGTAG
Protein Sequence: MMGEVIRVSGRAPDVGDILKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSKATAHCEPITVILAEMEAPELAALLGFVYTGSATVPRMRLDAFLRAAETLRIRLPPVPVTTICAERSPADCKLEDVKDVKVNPKYLRCNQYPWCRSGRLSYEDPHDRKESRIFPTEDNRNVFRDIGTLREINHPGPSSFDRNCPSGWPIDSFVYQDRTIDDASIEKDHRSVIVGDKNRMIAPSSESSFDVYQRDACLPDRSFAERYDSLDPSERMRISGYERSQMNRSTEKPMTDEDVHAAGSGGDSYGRIRDECPYQGTMPSSSLQCRTRSFERTTDYGSQTAVGEDLSCGESCCRWRTVRRHVANRVTASPWRQIIRPHHSPRTPRSVVPQRHVDDGIQKKPLTPEPTRSTVISMSPKVHSPSRNTPRNDGFYAVEVPTNCEMSFNDTRSCDIVGGPETNMQEIYRSPPASFAPCNQITPPASALKSNEPPFQNVSNMPSVARLLPAVNDSVITNTAGYTTSIPVPQTPQKHELSHPISRLCDTIESDEKKESSRMEMANTEKNEEEKIAVLVNSDNNNNNETIVNTIDVAQRGRSVDDHKCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCNLCSKAFTKKHHLKTHLNYHTGTKPYSCSNCGGRFSQSSNMRTHFKKCIVNNAVGLIKSGDEISVDRPDAEGNVAPQMALTPPNSDQESSILTPIQGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280128;
90% Identity: iTF_01245395;
80% Identity: iTF_00729466;