Basic Information

Insect: Camponotus fellah
Gene Symbol: -
Assembly: GCA_030586385.1
Location: JAPIVC010000606.1:763591-773573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1 2.1e+02 4.1 0.4 6 20 349 363 348 365 0.94

2 9 9e-07 0.00019 23.2 2.6 1 23 597 619 597 619 0.98

3 9 2.9e-05 0.0061 18.4 2.0 1 23 625 647 625 647 0.98

4 9 1.8e-06 0.00038 22.2 0.3 2 23 656 677 656 677 0.98

5 9 6e-05 0.012 17.4 0.1 3 23 685 705 683 705 0.97

6 9 1.9e-07 4e-05 25.3 3.0 1 23 711 733 711 733 0.98

7 9 3.3e-06 0.00068 21.4 0.7 1 23 739 761 739 761 0.98

8 9 5e-05 0.01 17.7 7.4 1 23 767 789 767 789 0.98

9 9 0.00043 0.09 14.7 1.4 1 21 795 815 795 816 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1	2.1e+02	4.1	0.4	6	20	349	363	348	365	0.94
2	9	9e-07	0.00019	23.2	2.6	1	23	597	619	597	619	0.98
3	9	2.9e-05	0.0061	18.4	2.0	1	23	625	647	625	647	0.98
4	9	1.8e-06	0.00038	22.2	0.3	2	23	656	677	656	677	0.98
5	9	6e-05	0.012	17.4	0.1	3	23	685	705	683	705	0.97
6	9	1.9e-07	4e-05	25.3	3.0	1	23	711	733	711	733	0.98
7	9	3.3e-06	0.00068	21.4	0.7	1	23	739	761	739	761	0.98
8	9	5e-05	0.01	17.7	7.4	1	23	767	789	767	789	0.98
9	9	0.00043	0.09	14.7	1.4	1	21	795	815	795	816	0.94

Sequence Information

Coding Sequence: ATGACGGAGGTTAATTCAAATCGGTTCCCTGATCTCGGCGACTGGCCAATAGCGGTTAATTATCGcgttaaaaaatcgaaaagatCCGTCGAATCGACCACCGAGGCCGTAATTACAGTTATCTCGGCGCAACGTGGTCTTCAAGCTTGCAACAATGAGACGCTCGAGGTATTGTTGGCGCATAGCAAGGCCACCGCTCATTGTGAGCCGATCACGGTGATCCTGGCTGAAATGGAAGCGCCGGAACTCGCGGCTCTTCTCGGCTTCGTCTACACCGGAAGTGTCACGGTTCCGCGGATGCGATTGGACGCGTTTTTACGCGCTGCCGAGACCCTGCGAATTCGATTGCCACCGGTACCAGTGACAACGACTTGCGGCGAGCGAGCGCAAACGGACTGTAAACTGGAGGATGTGAAAGACGTCAAAGTTAATCCCAAGTATCTGCGATGCGATCAATATCCTTGGTGCAGATCGGGGAGACCATCCTACGAAGATCCGCTCGATAGAAAGGAGGCCAGGATTTTTTCAATGGACGGCAACAGGAACGTTTCTAAGAACATCGGGACGCCTCGCGAAGTCAATAATCCTGGTCCCAGTTCGTTTGAGCCAAGCTGTCCGGGCGGCTGGCCAATCGATGGTTTCCTGTATCAGGATAGAGCGATAGATGCTTCCGCGGAGAAAGATCACAGCTCGGTGATAGTCACGGATAAAAATCGCATGATAGCTCCTAGTAGCGAATCGTCCTTCGACGTTTATCAGCGAGACGCGTGTCTTCCTGATAGATCGTTCGCGGAAGGATACGGTAATAGTCTGGATTTTTCGGAGAGGATCAGAATATCGGGCTACGAGAGATCGCAGCTGAATCGTTCGACGGAGAAGCCGATGACGGACGATGATGTACGCGTGGCAGACGAGTCTTATGAAAGGTCACGCGACGAGTACCCCTTCCAGGCCATGCCGTTGTCGTCCTTGCAGTGTCGGACAAGGTCTTTCGAGAAGACGATCGATTATGGCTCGCAGACGACGGCGGGTGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCATCCGTAGGCATGTGGCCAATCGCGTCACCGCGTCGCCGTGGCGCCAGATTATCAGACCTCATCATTCACCGAGAACCCCTCGGTCCGTCGTATCCCAACGTCATATCGATGATGAAATTCAAAAGAAGCCTCTAACTCCAGAACCAACTCGATCTACGGTAATATCGATGAGCCCGAAGATCCATTCCCCGAATAGGAATCCATCGAGAAATGACGGGTTTTACGCTGTCGAAGTTCCTACCAATTGCGAGATGAGCTTTAGCAATGATACGAGATTATGCGAGACGATCGGTGTTCCAGAGACGAACATGCAGGAGATCTATCGATCTCCGCCAGCTCCATTCGCACCCTGCAATCAAATCGCACCGCTTGCGAACTCGTCGAGAAGCAACGATCCGCCCGTTCGAAACGTCAGCAACACGCCTACGCGATTATTGCCTGCCGTTAACGACAGCGTTATCACGAATGCCGGCGGATATACGACGCCGATTCCGGTTCCGCAGACGCCGCAGAAACACGAATTGTCGCATCCGATCAGCAGACTCTGCGACACGATCGAGTCCGACGAGAAGAGGGAGTCGTCGAGGATGGAGATGGCGAACACGGAGAAGAATGAGGAGGAGAGAATTCTTGTTAATAGcgataataacaataacaacgaGACGATCGCCAGGAGTATCGAAGCGACTCAGATCGGACGATCGGCCGACGATCACAAGTGTGATCAGTGCGGGAAGACCTTCGTCACGAGAGCCTCGCTAAAGGTGCATAGCCGAACACACTCGGGCGAGAAGCCGTTCCGTTGCGCTGATTGCGGCAAACAATTCTCGCAGCTGCGCAACTATAAGTACCACCGCAGCGTGCACGAGGGCACGCGGGAGTTCGCCGCGACTTGTCCGGAATGCGGCAAGTACTTCAACGATCGCGGTTATCTGAGCTCGCATATGAAGATCCATCGGAATCGCAAGGAGTACGGCTGCGCGGAATGCGGCAAAAGTTTCAACCAGCGCGTGGCCTACAACATGCACGTGCGCATACATACGGGCGTGAAGCCGCATCAGTGCGAGCAATGCGGCAAAGCGTTTTCGCGGAAGATGCTGCTCAAGCAACATCTGAGGACTCATTCCGGCGAACGGCCGTATCAGTGCCAGGTCTGCCAGAAAGCGTTCGCCGATCGCTCCAACATGACCCTGCACACCAGGCTGCACTCCGGTCTGAAGCCGTACCAGTGCAATCTATGCTCGAAGGCCTTCACCAAGAAGCACCACCTCAAGACGCATCTCAATTACCATACTGGCACTAAGCCGTACTCCTGCTCCAACTGCGGTGGCAGGTTCTCGCAGAGTAGCAACATGAGGACTCATTTCAAGAAATGCATCGTCAACAACGCTGTCGGATTAGCCAAATCCGGCGACGAGATTGGTGTCGATCGCGCCGATCCTGAGGGTAACGTGGCGCCGCAGATGGTCCTGACGCCGCCCAACTCTGATCAGGAGTCCAGCATCCTGACACCGATACAGAGCAGCGCGTAG
Protein Sequence: MTEVNSNRFPDLGDWPIAVNYRVKKSKRSVESTTEAVITVISAQRGLQACNNETLEVLLAHSKATAHCEPITVILAEMEAPELAALLGFVYTGSVTVPRMRLDAFLRAAETLRIRLPPVPVTTTCGERAQTDCKLEDVKDVKVNPKYLRCDQYPWCRSGRPSYEDPLDRKEARIFSMDGNRNVSKNIGTPREVNNPGPSSFEPSCPGGWPIDGFLYQDRAIDASAEKDHSSVIVTDKNRMIAPSSESSFDVYQRDACLPDRSFAEGYGNSLDFSERIRISGYERSQLNRSTEKPMTDDDVRVADESYERSRDEYPFQAMPLSSLQCRTRSFEKTIDYGSQTTAGEDLSCGESCCRWRTIRRHVANRVTASPWRQIIRPHHSPRTPRSVVSQRHIDDEIQKKPLTPEPTRSTVISMSPKIHSPNRNPSRNDGFYAVEVPTNCEMSFSNDTRLCETIGVPETNMQEIYRSPPAPFAPCNQIAPLANSSRSNDPPVRNVSNTPTRLLPAVNDSVITNAGGYTTPIPVPQTPQKHELSHPISRLCDTIESDEKRESSRMEMANTEKNEEERILVNSDNNNNNETIARSIEATQIGRSADDHKCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCNLCSKAFTKKHHLKTHLNYHTGTKPYSCSNCGGRFSQSSNMRTHFKKCIVNNAVGLAKSGDEIGVDRADPEGNVAPQMVLTPPNSDQESSILTPIQSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280128;
90% Identity: iTF_00264446;
80% Identity: iTF_00264446;