Basic Information

Insect: Campoletis sonorensis
Gene Symbol: -
Assembly: GCA_013761285.1
Location: JACEOJ010000081.1:855449-859204[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0075 0.61 10.8 0.3 1 20 170 189 170 190 0.96

2 13 0.012 0.99 10.2 4.6 2 23 322 344 322 344 0.91

3 13 0.00029 0.023 15.3 1.4 3 23 405 426 404 426 0.96

4 13 6.8 5.5e+02 1.5 7.6 3 23 513 534 512 534 0.95

5 13 0.045 3.7 8.4 0.2 1 23 585 608 585 608 0.95

6 13 0.00068 0.055 14.1 0.4 2 23 654 676 653 676 0.95

7 13 0.00079 0.065 13.9 0.1 3 23 699 720 697 720 0.93

8 13 0.16 13 6.7 4.4 2 23 787 809 786 809 0.96

9 13 0.012 0.99 10.2 2.4 2 23 823 845 822 845 0.94

10 13 0.00083 0.068 13.8 0.1 2 23 890 912 890 912 0.93

11 13 0.056 4.6 8.1 1.6 1 23 995 1017 995 1017 0.98

12 13 0.00049 0.04 14.6 0.3 3 23 1034 1055 1033 1055 0.98

13 13 0.017 1.4 9.7 0.4 1 23 1131 1154 1131 1154 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0075	0.61	10.8	0.3	1	20	170	189	170	190	0.96
2	13	0.012	0.99	10.2	4.6	2	23	322	344	322	344	0.91
3	13	0.00029	0.023	15.3	1.4	3	23	405	426	404	426	0.96
4	13	6.8	5.5e+02	1.5	7.6	3	23	513	534	512	534	0.95
5	13	0.045	3.7	8.4	0.2	1	23	585	608	585	608	0.95
6	13	0.00068	0.055	14.1	0.4	2	23	654	676	653	676	0.95
7	13	0.00079	0.065	13.9	0.1	3	23	699	720	697	720	0.93
8	13	0.16	13	6.7	4.4	2	23	787	809	786	809	0.96
9	13	0.012	0.99	10.2	2.4	2	23	823	845	822	845	0.94
10	13	0.00083	0.068	13.8	0.1	2	23	890	912	890	912	0.93
11	13	0.056	4.6	8.1	1.6	1	23	995	1017	995	1017	0.98
12	13	0.00049	0.04	14.6	0.3	3	23	1034	1055	1033	1055	0.98
13	13	0.017	1.4	9.7	0.4	1	23	1131	1154	1131	1154	0.98

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGTGAGCAATTGGGGATGATGATGGAGCAGCAAATAAGTGAAATTGACAGTGAGAGTTCGAGCAGTTGCGAGGACAGGGAAGCGCGAAAGCGTTTGCGTGAGGATCCGGACAGCAATCTTGGTGGGAGTCCGAAAAAACGTCGGAAGCAAACGACACCAGTTAGATTTCCAACGTCGTTGATGAGCAACAACGGCGAGAGGAACGAGTCGGAGGAGGAGGAGGAGGAGGAGGAAGGAGAGGAGGAGGAGGAGGAGGAAGAGGAGGACGAGGAACAACTGGACGAGAACGATTTGGAGGGTGAGACCGAACCGGGGGAGAGAAGGAACAACGGAGCAACAATCCGGAGGAGCGAAGCTGATGAAGCGCTGCTGGAAGGTAAGCCAAGAACGTTATCACCGCAAGCGTATGTGCGAAATATGATCGGCCAAACGACAACGGCTACAGGGACGATGGCAACTTTCGCCAAAGACGAGAATCTCAACAGTGAGTTTCGCTGTCAGTTCTGCGCTCTTTCGTTCAACGACAACGAATTATTGTCGCGACATTTAGAATGCGAGCATGCGATAGTTTGTAACGCGGCGTCTAGCGATTCACCGATCTCCGATCAAGTTAGGGTCAAACTAGAACCGTCGAGTCAGATCCTCGAGGATCCTGAGAGTCCAGTCAACCTTTCCGGTCTGGGTGTCAAAAGTTTCGCCGCTAATTGGCTCAATTCTCAAGCCCAAGTCCAACAACAACAACACATTCAATTACAGTCTCAAAATCCAGAAGATTGGACATCTCCCAGTCCCCTTACTTCCGTTCCCAATCATCTTCAAGCCCTCACTTTCCCTGGTGCACTTGCCCAGTATCTCCCCCTGCCAGGATTTTCCCTCACCGATGCCGGTCAACTGACACGGCCGCCCGTCGGACCAGCACCCATCAGAATCTTTAATCCCGACGCCTATTGTGATCTCTGCAACAAAGAATTTTGCAACAAGTATTTTCTCAAAACCCACAAAGCCAACAAGCATGGAATTTACGTGGATGCACCTTCGCAAAATCCGGGTGATAATGGTATGCCCCCGGGAGGTATCCAACCTGGTATGTTCACCGGAGCATTCGCTGGTGGGAGTATCGTCAAATCGGAACAATCACAAAGGCTCGAAGTTCCTACTCCGCTAGTTTCCGTACCCTTGAGCAACACAGTAGCCTGTGACGTGTGCCAGAAGCGTTTCAAAAACGACGAATCACTAAGAAAACACAAGCAGAAGGTTCACAACGAATCGATCGATAACCAAGAATCCCATTCACTGCCAGCGACAAGTAGTAGCGTCGACGAGGATCGTGAAGTGTCGCGAAACAGTCCTAGCGCGATGGAGGCACTTTTTAAGCAGGAATTCGGGGTCGAACAAGAAGATTCGAAATTTATGCCTGCGCCGCGCCACCTGTCACCACAGTCGAGCCAGCAGGCCAGAGACTCGGGTTTCAACGTCGATCGTCTCAGACGCCTCGGTGTCATCAACCCTGAGGCATTCTGTGAAATTTGTTGCAAAGAATATTGCAACAAGTATTTCCTAAGAACACATAAAATGAAGAGACACGGTATTTACGTCCAAGAGAGCGAAAAACCACCCAGCAATCCTGGCAACGCGGCGACATGGCATCAGATTCAAACGAGTCCTTTGAACCTCATCGTGACCGATGGCAACGCCGGTAGTTCCTCGGAGTCCGGTGATCGTCCTGGAGAAGATTTCGAGTGTAAACCTTGTGGCATTCGCTTCCAAACCTTGGGACTGTACCGTGCCCATCGGGCTAAAATCCACGAAACTGACGAGTCGTCCAAGCAGGATTTCGAGGCGGATCCGACGGACCAACGAAGCGATTCCATATCCGAGGATCTCCAGAAACTTCAGACCATGATTTTACAAATAAACGGGCTGGAAGCCAGCAAAACTTTGAACTGCGGAATATGTGGCAGAGAGTGCGAAAATTTTAATGCTCTACGAGCTCACATGAGACTGGAACACGGTGGAATCGCTGATGAAATATCTTCGCAGACTAACGATCATTCGCTCAACGGTACATCGACCTTCTGCACGATCTGCGACAAGGAATACCAAACTCCGGAAGCTCTGAGGCAACATATCACTGAGGAACATCAACAGGTCAATCCTAACAACGTTTCGACTACGATTCCATCGCAGCCTCCGACCATTTCACCAACAGTTACCGTTCAAACGTCAATCCCTGCGGTTACAACTCCCGTCACGATTCCAACGCCATCTTCAGCATTAGTTCAAACCCCAACCGCCCCACAGCCCGAGAGAAAAATCACTTCGATGACACCAACCTCAAGTTACTGCGAACTGTGTCGCAAGGAATTGTGCAACAAGTATTTCATGAAGACGCACATGCAGAAGATGCACAACATCGAGATTGAAAACGGTTCTCAAATCGGTGGCGTGGTGTGCAACATATGCAACAAAGAATTGTGTAGCAAGTATTTTCTACGCGTACACAAGCAAAACACTCACGGTATCGTCGACGAGGGAAGTACAGCGTCGAACAAGCAAGAATCCTTCGAATCATCGAGCAACGAAGACGCGGCATTGAAGCCTGATCAACTCGGGGATTTGAGTCATCGTTATTTCACTCATTTCACGGAAGTGTGTCCAGTGTGTAGTCGACGATTTAGAAGTATTAAATGGCTGAAGGCTCATCTTCTTGGTGATCATGGAAAAATAGGAGTTGAAAAATGGCGCGAGCTCGAGAATCAGTATCAAAATTCATCGAGAGGAGGAGTGAGGAGCTCAGGAGGTGGAGTTGCGGGCAGAATAGCTGCGCAAAATCAAAGCATCAAAATACCAAACGGATTGGAAATGGTTCAACAGCAAATGAAGAACAACGATTACGTCGGTCTTGGAAACCAAGTTCTGTCCAGCCTCTTTGGCTCGACGACGGAGGACCAACAGAGCAAAAGTTATCGCTGCTCCTATTGCAACTTCACAACAACAGTTTTGCCGTTTTTGTTCCTCCACGAGAGATCGCATACGAGCCCTCAGGATAATAATTCAAGCGCTGAAGGCGGTTCGATTTTGTGTCCGATTTGCTCGCAGGCATTCGGTCAAGCCGAACTACTGCAACATCATCTGTTAACGCGCCATCAATTCTCGGGCTTACTGTCTCAAATGCCTGCTCCATTGATCAACAGTCCAAGACTGGAGGCAGGTAGTGTCGAAAAGAATAATGAGATTTATGATAAAGTCGAGTACGAAGGAAAGGAGGAACATCGTCAATCAAGTCCCCAAGTATCTTTGGGAAACACGGAGTCTCCGATGAAGAGCCAAAAGCCTGAAGAGCCAGTGGTTCAGGTGACACCTCAGGGAGCTTACAAATGTGCTCAGTGCGGTTACGCGACCGCTAATCTCAACAGGATCAAAAAACACGTGAGAAAGGATCACAAAGCAATGGGCGACGCGACTGAAAGCGTTATCGACGAATTGAGCAAGACGCTGAGAGACGTTGCGAACAAACACAAATTACCAGCGAGTTACGCGATGCCACAAGACTTGAATTCGAATCCCGACGCCACGACGGTGATGCAACCATTTTTGATCGAGGAAAGAGAGAACGCTGGTAAAATGGGTGACGAAATGAGCCAAGAGAAACGTTTTGCACCTGCCCTCGTTTATTTGCCGGTAAGAGCAAGGATCAACAGTTCCCTCACGACCTCCTTCACCCTCAGTCCTGCCTGA
Protein Sequence: MASTVAREQLGMMMEQQISEIDSESSSSCEDREARKRLREDPDSNLGGSPKKRRKQTTPVRFPTSLMSNNGERNESEEEEEEEEGEEEEEEEEEDEEQLDENDLEGETEPGERRNNGATIRRSEADEALLEGKPRTLSPQAYVRNMIGQTTTATGTMATFAKDENLNSEFRCQFCALSFNDNELLSRHLECEHAIVCNAASSDSPISDQVRVKLEPSSQILEDPESPVNLSGLGVKSFAANWLNSQAQVQQQQHIQLQSQNPEDWTSPSPLTSVPNHLQALTFPGALAQYLPLPGFSLTDAGQLTRPPVGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPSQNPGDNGMPPGGIQPGMFTGAFAGGSIVKSEQSQRLEVPTPLVSVPLSNTVACDVCQKRFKNDESLRKHKQKVHNESIDNQESHSLPATSSSVDEDREVSRNSPSAMEALFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYVQESEKPPSNPGNAATWHQIQTSPLNLIVTDGNAGSSSESGDRPGEDFECKPCGIRFQTLGLYRAHRAKIHETDESSKQDFEADPTDQRSDSISEDLQKLQTMILQINGLEASKTLNCGICGRECENFNALRAHMRLEHGGIADEISSQTNDHSLNGTSTFCTICDKEYQTPEALRQHITEEHQQVNPNNVSTTIPSQPPTISPTVTVQTSIPAVTTPVTIPTPSSALVQTPTAPQPERKITSMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEGSTASNKQESFESSSNEDAALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKIGVEKWRELENQYQNSSRGGVRSSGGGVAGRIAAQNQSIKIPNGLEMVQQQMKNNDYVGLGNQVLSSLFGSTTEDQQSKSYRCSYCNFTTTVLPFLFLHERSHTSPQDNNSSAEGGSILCPICSQAFGQAELLQHHLLTRHQFSGLLSQMPAPLINSPRLEAGSVEKNNEIYDKVEYEGKEEHRQSSPQVSLGNTESPMKSQKPEEPVVQVTPQGAYKCAQCGYATANLNRIKKHVRKDHKAMGDATESVIDELSKTLRDVANKHKLPASYAMPQDLNSNPDATTVMQPFLIEERENAGKMGDEMSQEKRFAPALVYLPVRARINSSLTTSFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00439752; iTF_00262894; iTF_01103811; iTF_01101616; iTF_01102324; iTF_01103092; iTF_01100887; iTF_01299561; iTF_00829041; iTF_00829787;
90% Identity: iTF_00439752; iTF_00262894; iTF_00829041; iTF_00829787;
80% Identity: -