Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold22:5807315-5811127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0035 0.3 11.5 0.4 1 20 176 195 176 196 0.96

2 13 0.0093 0.8 10.2 4.6 2 23 328 350 328 350 0.91

3 13 0.00051 0.043 14.1 3.4 3 23 412 433 411 433 0.95

4 13 5.2 4.5e+02 1.5 7.6 3 23 520 541 519 541 0.95

5 13 0.037 3.1 8.3 0.3 1 23 592 615 592 615 0.95

6 13 0.0006 0.052 13.9 0.4 2 23 661 683 660 683 0.95

7 13 0.0022 0.18 12.2 0.1 3 23 706 727 704 727 0.93

8 13 0.12 10 6.7 4.4 2 23 796 818 795 818 0.96

9 13 0.0094 0.8 10.2 2.4 2 23 832 854 831 854 0.94

10 13 0.00064 0.055 13.8 0.1 2 23 899 921 899 921 0.93

11 13 0.043 3.7 8.1 1.6 1 23 1012 1034 1012 1034 0.98

12 13 0.00022 0.019 15.3 0.3 3 23 1051 1072 1050 1072 0.98

13 13 0.022 1.9 9.0 0.4 1 23 1149 1172 1149 1172 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0035	0.3	11.5	0.4	1	20	176	195	176	196	0.96
2	13	0.0093	0.8	10.2	4.6	2	23	328	350	328	350	0.91
3	13	0.00051	0.043	14.1	3.4	3	23	412	433	411	433	0.95
4	13	5.2	4.5e+02	1.5	7.6	3	23	520	541	519	541	0.95
5	13	0.037	3.1	8.3	0.3	1	23	592	615	592	615	0.95
6	13	0.0006	0.052	13.9	0.4	2	23	661	683	660	683	0.95
7	13	0.0022	0.18	12.2	0.1	3	23	706	727	704	727	0.93
8	13	0.12	10	6.7	4.4	2	23	796	818	795	818	0.96
9	13	0.0094	0.8	10.2	2.4	2	23	832	854	831	854	0.94
10	13	0.00064	0.055	13.8	0.1	2	23	899	921	899	921	0.93
11	13	0.043	3.7	8.1	1.6	1	23	1012	1034	1012	1034	0.98
12	13	0.00022	0.019	15.3	0.3	3	23	1051	1072	1050	1072	0.98
13	13	0.022	1.9	9.0	0.4	1	23	1149	1172	1149	1172	0.98

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGTGAACAGTTGGGGATGATGATGGAGCAACAAATAAGTGAAATTGACAGTGAGAGTTCGAGCAGTTGCGAGGATCGAGACGCGCGGAAACGATCGCGCGAGGATCCGGACAACAACCTCGGCGGTGGCAGTCCGAAAAAACGTCGCAAGCAAACGACGCCCGTTAGATTTCCAACGTCGTTGATGGGCAACAACGGCGAAAGGAACGAGTCCGAGGACGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGACGAGGAGGAACAACTAGTGGACGAAAATGATTTGGAGGGTGAGACGACCGAGCCGGGGGAGAGGAGGAACAGCGGGGCGACACCACGAGTCAACGAAGCCGACGAGACGCTGCTGCTGGAAGGTAAGCCAAGAACGTTATCACCGCAAGCGTTTGTGCGAAATATCATCGGACAAACGACAACGGCTTTGGGAACGATGGCAACTTTCGCCAAAGACGAGAATCTCAACAGCGAATTTCGTTGTCAATTCTGCGCCCTTTCGTTCAACGACAACGAATCATTGTCGCGACATTTAGAGTGCGAGCATGCGATTGTTTGTAACGCGGTAGCGAGCAGCTCGCCGCTCTCTGATCAAGTCAAAGTAAAGCTAGAACCGTCGAGTCAGATCCTCGAGGATCCCGAGAGCCCGGTCAATCTTTCCGGTCTAGGGGTCAAAAGTTTCGCCTCTAATTGGCTCAATTCTCAAGCCCAGTCCCAACAACAACAACAGATTCAATTACAATCTCAAAATCCCGAAGACTGGACATCCCCCAGTCCCGTTTCTTCCGTTCCCAATCATCTTCAAGCTCTTTCCTTCCCCGGTGCGCTTGCCCAGTATCTCCCTCTGCCTGGATTTTCTCTCACCGACGCTGGTCAACTGTCTCGACCTCCCGTCGGTCCAGCACCCATCAGGATATTCAATCCCGACGCGTACTGCGATCTCTGCAACAAGGAATTTTGCAACAAGTACTTTCTCAAGACTCACAAGGCCAACAAGCACGGGATTTACGTGGACGCGCCTTTGCAGAATCCCGGGGATAACGGTTTGCCACCGGGAGCTATTCCACCTGGAATGTTCACCGGAGCATTCGCTGCTGGCAGTCTTGTCAAATCGGAACAATCACAGAGCAGGCTCGAAGTCCCGACTCCGTTGGTCTCTGTTCCCTTGAGCAACACCGTCGCCTGTGACCTTTGCCAGAAACGCTTCAAAAACGAGGATTCACTCAGAAAACACAAGCACAAAGTTCACAACGAGTCGATCGATAATCAAGAGACCCATTCACTGCCAGCAACGAGTAGTAGCGTCGACGAGGATCGCGAAGTCTCCAGGAACAGCCCGAGCGCCATGGAGACACTTTTCAAGCAAGAATTCGGGGTCGAGCAAGAAGATTCAAAATTTATGCCTGCGCCGCGCCACTTGTCACCACAATCCAGCCAACAAGCCAGAGACTCGGGTTTCAATGTTGATCGCCTGAGACGCCTCGGTGTCATAAATCCCGAGGCATTCTGTGAGATCTGTTGCAAAGAATATTGCAACAAGTATTTCCTTCGAACCCACAAGATGAAGAGACACGGGATTTACGTCCAAGAGAGCGAGAAGCCACCGAGCAATCCTGGAAACGCTGCGACATGGCATCAGATTCAAACGAGCCCATTGAACCTCATAGTGACTGAAGGAAACGCCGCAAGTTCCTCGGAGTCTGGTGATCGCCCTGGCGAAGATTTCGAGTGCAAACCTTGCGGCATTCGCTTCCAAACTCTTGGACTGTATCGCGCTCATCGTGCGAAAATGCACGAAACGGAGGACTCGGCCAAGCAAGATTTCGATGCGGACGCGACCGAGCAACGAAGCGATTCCATTTCCGAAGACCTCCAGAAACTCCAGAGCATGATTTTACAAATAAACGGTCTGGAAGCGAGTAAAACACTAAATTGCGGTATTTGCGGCAGAGAATGCGAGAATTTTGCTGCTTTACGGAGCCACATGAGACTCGAACACGGCGGCATCGCCGATGAAATCTCCTCGCAGATAAACGACAACTCGCTCAACGGCGCCTCGACGTTCTGCACCATCTGCGAGAAGGAATACCAAACTCCGGAAGCCCTGAGGCAACATATCACTGAAGAACATCAACAGAGTAACCCTAACAATGTTTCGACGACGATTCCATCCCAGACTCCGACCATTTCACCGACCGTTTCGGCCCCGACATCAATTCCCGCGTTGACAACTCCAGTCACGATTCCTGCAGCATCGACAGCAGGATCAGTGCAAACCCCGTCGGTGGTGGCTCAGCCCGAAAGAAAAATCACGTCGATGACCCCGACCTCGAGTTACTGCGAGCTCTGTCGCAAGGAATTGTGCAACAAGTATTTCATGAAGACACACATGCAGAAGATGCACAACATCGAGATCGAGAACGGTTCGCAAATCGGCGGGGTCGTGTGCAACATATGCAACAAGGAATTGTGCAGCAAATATTTTCTCCGGGTGCACAAGCAAAACACTCATGGTATCGTGGACGAGGGGAGTGCAGCATCGAACAAGCAAGAATCTTTCGAATCATCGAGCAACGAGGACGCGGCATTGAAGCCTGACCAACTGGGCGATTTGAGTCATCGTTACTTTACGCATTTCACGGAAGTCTGTCCGGTCTGTAGTCGTCGATTCAGAAGCATTAAATGGCTGAAGGCTCATCTTCTCGGTGATCATGGAAAAGTGGGAATTGAAAAATGGCGAGAGCTCGAGAACCAGTATCAAAATTCATCGCGAGGAGGAGGAGGAGGTGGTGCGAGGGGCGGTGCACCTGGTGGTGGCGGGGTAACGAGCAGAATAGTAGCGCAGCAGAATCAGAGCATAAAAATCCCAAACGGATTGGAACTGGTTCAACAGCAAATGAAGAACAACGATTACATCGGTCTGGGGAACCAGGTACTGTCGAGCCTTTTTGGCTCGACGACCGAGGACCAACAGAGCAAAAGTTATCGATGCTCCTACTGCAACTTTACAACGACGGTGTTGCCATTCCTGTTTCTCCACGAGAGATCGCACACGAGCCCTCAAGACAGTAATCCAAGTGGAGAAAGCGGTTCGATCTTGTGTCCGATATGCTCTCAGGCTTTCGGTCAACCCGAGTTGCTGCAACATCATCTGTTGACGCGCCATCAATTCTCAGGTTTGCTCTCACAAATGCCCGCTCCGTTGATCAACAGTCCGCGGCCGGAGGTCGGAAGCATCGAGAAAAATAATGAGATTTATGAGAAAGGAGAGTACGAGGCAAAGGAGGAGCATCGTCGAACGAGTCCTCAAGTATCTCTCGGAGGAAACAGCGAGTCTCCGATAAAGAGCCAAAAGCCCGAAGAGCCAGTGGTCCAGGTGACGCCTCAAGGAGCCTACAAGTGTGCTCAGTGCGGTTACGCCTCGGCGAATCTCAACAGAATAAAGAAGCACGTAAGAAAAGATCATAAAGCGATGGGTGACGCGACGGAGAGTGTTATCGACGAGTTGAGTAAGACGTTGAGGGACGTTGCGAACAAGCACAAGTTACCGGCGAGTTACGCGATGCCGCAAGACATGAATTCGAATCCTGACGGGACGACGGTAATGCAACCATTTTTAATCGAGGAGCGAGACACGGCTGGTGGAAAGATGGGCGACGAGATGAGCCACGAGAAACGTTTCGCACCTGCTCTCGTTTATTTACCGGTAAGAGCAAGGATAAACAGTTCCTTAACGACCTCCTTCACCCTGAGTCCCGCCTGA
Protein Sequence: MASTVAREQLGMMMEQQISEIDSESSSSCEDRDARKRSREDPDNNLGGGSPKKRRKQTTPVRFPTSLMGNNGERNESEDEEEEEEEEEEEEEEEEEDEEEQLVDENDLEGETTEPGERRNSGATPRVNEADETLLLEGKPRTLSPQAFVRNIIGQTTTALGTMATFAKDENLNSEFRCQFCALSFNDNESLSRHLECEHAIVCNAVASSSPLSDQVKVKLEPSSQILEDPESPVNLSGLGVKSFASNWLNSQAQSQQQQQIQLQSQNPEDWTSPSPVSSVPNHLQALSFPGALAQYLPLPGFSLTDAGQLSRPPVGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPLQNPGDNGLPPGAIPPGMFTGAFAAGSLVKSEQSQSRLEVPTPLVSVPLSNTVACDLCQKRFKNEDSLRKHKHKVHNESIDNQETHSLPATSSSVDEDREVSRNSPSAMETLFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYVQESEKPPSNPGNAATWHQIQTSPLNLIVTEGNAASSSESGDRPGEDFECKPCGIRFQTLGLYRAHRAKMHETEDSAKQDFDADATEQRSDSISEDLQKLQSMILQINGLEASKTLNCGICGRECENFAALRSHMRLEHGGIADEISSQINDNSLNGASTFCTICEKEYQTPEALRQHITEEHQQSNPNNVSTTIPSQTPTISPTVSAPTSIPALTTPVTIPAASTAGSVQTPSVVAQPERKITSMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEGSAASNKQESFESSSNEDAALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKVGIEKWRELENQYQNSSRGGGGGGARGGAPGGGGVTSRIVAQQNQSIKIPNGLELVQQQMKNNDYIGLGNQVLSSLFGSTTEDQQSKSYRCSYCNFTTTVLPFLFLHERSHTSPQDSNPSGESGSILCPICSQAFGQPELLQHHLLTRHQFSGLLSQMPAPLINSPRPEVGSIEKNNEIYEKGEYEAKEEHRRTSPQVSLGGNSESPIKSQKPEEPVVQVTPQGAYKCAQCGYASANLNRIKKHVRKDHKAMGDATESVIDELSKTLRDVANKHKLPASYAMPQDMNSNPDGTTVMQPFLIEERDTAGGKMGDEMSHEKRFAPALVYLPVRARINSSLTTSFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263801;
90% Identity: iTF_00263801;
80% Identity: -