Basic Information

Insect: Hyposoter dolosus
Gene Symbol: -
Assembly: GCA_963921915.1
Location: OY998137.1:9904096-9907851[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0038 0.36 11.5 0.4 1 20 171 190 171 191 0.96

2 13 0.01 0.96 10.2 4.6 2 23 322 344 322 344 0.91

3 13 0.0003 0.028 15.0 1.7 3 23 405 426 404 426 0.96

4 13 5.7 5.4e+02 1.5 7.6 3 23 514 535 513 535 0.95

5 13 0.039 3.7 8.3 0.3 1 23 586 609 586 609 0.95

6 13 0.00058 0.055 14.1 0.4 2 23 655 677 654 677 0.95

7 13 0.0023 0.22 12.2 0.1 3 23 700 721 698 721 0.93

8 13 0.13 12 6.7 4.4 2 23 788 810 787 810 0.96

9 13 0.01 0.96 10.2 2.4 2 23 824 846 823 846 0.94

10 13 0.00069 0.066 13.8 0.1 2 23 891 913 891 913 0.93

11 13 0.047 4.4 8.1 1.6 1 23 998 1020 998 1020 0.98

12 13 0.00024 0.023 15.3 0.3 3 23 1037 1058 1036 1058 0.98

13 13 0.024 2.3 9.0 0.4 1 23 1131 1154 1131 1154 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0038	0.36	11.5	0.4	1	20	171	190	171	191	0.96
2	13	0.01	0.96	10.2	4.6	2	23	322	344	322	344	0.91
3	13	0.0003	0.028	15.0	1.7	3	23	405	426	404	426	0.96
4	13	5.7	5.4e+02	1.5	7.6	3	23	514	535	513	535	0.95
5	13	0.039	3.7	8.3	0.3	1	23	586	609	586	609	0.95
6	13	0.00058	0.055	14.1	0.4	2	23	655	677	654	677	0.95
7	13	0.0023	0.22	12.2	0.1	3	23	700	721	698	721	0.93
8	13	0.13	12	6.7	4.4	2	23	788	810	787	810	0.96
9	13	0.01	0.96	10.2	2.4	2	23	824	846	823	846	0.94
10	13	0.00069	0.066	13.8	0.1	2	23	891	913	891	913	0.93
11	13	0.047	4.4	8.1	1.6	1	23	998	1020	998	1020	0.98
12	13	0.00024	0.023	15.3	0.3	3	23	1037	1058	1036	1058	0.98
13	13	0.024	2.3	9.0	0.4	1	23	1131	1154	1131	1154	0.98

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGTGAACAGTTGGGGATGATGATGGAGCAACAAATAAGTGAAATTGACAGTGAGAGTTCGAGCAGTTGCGAGGATCGAGATGCGCGGAAACGATCGCGCGAGGATCCGGACAACAACCTCGGCGGTGGCAGTCCGAAAAAACGTCGCAAGCAAACGACGCCCGTTAGATTCCCAACGTCGTTGATGGGCAACAACGGCGAAAGGAACGAGTccgaggacgaggaggaggaggaggaggaagaagaggaagaggacgaGGAAGACGAGGAGGAACAACTAGTGGACGAAAACGATTTGGAGGGTGAGACCGAACCGGGGGAGACGAGGAACAGCGGAGCAACAACACGAATCAACGAAGCCGATGATACGCTGCTGGAAGGTAAGccaagaacgttatcaccgcAAGCGTTTGTGCGAAATATCATCGGACAAACGACAACGGCTTTGGGAACGATGGCAACTTTCGCCAAAGACGAGAATCTCAACAGCGAATTTCGCTGTCAATTCTGCGCCCTTTCGTTCAACGACAACGAATCATTGTCGCGACATTTAGAGTGCGAGCATGCGATAGTTTGTAACGCGGCACCGAGTAGCTCGCCGCTTTCCGATCAAGTCAAAGTCAAGCTAGAACCGTCGAGTCAGATCCTCGAGGATCCCGAGAGCCCGGTCAATCTTTCTGGTCTGGGGGTCAAAAGTTTCGCCTCTAATTGGCTCAATTCTCAAGCCCAGTCCCAACAACAACAGATTCAATTACAATCTCAAAATCCCGAAGATTGGACATCCCCCAGTCCCGTTTCTTCCGTTCCCAATCATCTTCAAGCTCTTTCCTTCCCCGGTGCGCTTGCCCAATATCTCCCTCTGCCTGGATTTTCTCTCACCGATGCTGGTCAACTGTCTCGACCTCCCGTCGGTCCAGCACCCATCAGGATCTTCAATCCCGACGCTTACTGCGATCTTTGCAACAAGGAATTTTGCAACAAGTATTTTCTCAAGACTCACAAGGCCAACAAACACGGGATTTACGTGGATGCACCTTTGCAGAATCCCGGGGATAACGGTTTGCCACCGGGAGCTATTCCACCTGGAATGTTCACCGGAGCATTCGCCGGTGGCAGTCTTGTCAAATCGGAACAATCACAGAGGCTCGAAGTTCCGACTCCGTTAGTTTCTGTTCCCTTGAGCAACACCGTGGCCTGTGACCTTTGCCAGAAACGCTTCAAAAACGACGATTCACTCAGAAAACACAAGCAGAAAGTTCACAATGAGTCAATCGATAATCAAGAGTCTCATTCACTGCCAGCGACGACGAGTAGTAGCGTCGACGAGGATCGCGAAGTCTCCAGGAACAGCCCAAGCGCCATGGAGACACTTTTCAAGCAAGAATTCGGGGTCGAGCAAGAAGATTCAAAGTTTATGCCTGCGCCGCGCCACCTGTCACCACAATCCAGTCAACAAGCCAGAGACTCGGGTTTCAATGTTGATCGCCTAAGACGCCTCGGTGTCATCAACCCCGAGGCATTCTGCGAGATCTGTTGCAAAGAATATTGCAACAAGTATTTCCTACGAACGCATAAGATGAAGAGACACGGGATCTACGtccaagagagcgagaagccACCGAGCAATCCTGGAAACGCGGCGACATGGCATCAGATTCAAACGAGTCCGTTGAATCTCATCGTGACTGAAGGAACCGCCGGAAGTTCCTCGGAGTCTGGTGATCGCCCTGGCGAAGATTTCGAGTGCAAACCCTGCGGCATTCGCTTCCAAACTCTTGGACTGTATCGTGCTCATCGTGCGAAAATGCACGAAACGGAAGACACGGCCAAGCAAGATTTCGACGCGGACCCGACCGACCAACGAAGCGATTCCATTTCCGAAGATCTCCAAAAACTCCAGACCATGATTTTACAAATAAACGGCCTGGAAGCCAGTAAAACACTAAATTGCGGAATATGCGGCAGAGAATGCGAGAATTTCGCTGCTTTACGGACTCACATGAGACTCGAACATGGCGGTATCGCCGATGAAATCTCTTCGCAGATTAACGAGAACTCGCTCAACGGCACCTCGACATTCTGCACCATCTGCGAGAAAGAATATCAAACTCCGGAAGCCCTGAGGCAACATATCACTGAGGAACATCAACAGAGTAACCCTACCAACGTTTCGACGACGATTCCATCGCAGACTCCGACTATTTCACCGACTGTTTCGGCCCCAACGTCCATTCCCGCGGTAACAACTCCAGTGACGATTCCTGCAGCATCCACAGGCTTAGTGCAAACCCCGACGGTGGCTCAGCCCGAAAGAAAGATCACATCGATGACCCCAACCTCGAGTTACTGCGAGCTCTGTCGCAAGGAATTGTGCAACAAGTATTTCATGAAGACACACATGCAGAAAATGCACAACATCGAGATCGAGAACGGTTCGCAGATCGGCGGAGTCGTGTGCAACATATGCAACAAGGAATTGTGCAGTAAATATTTTCTCCGGGTGCACAAACAGAACACTCATGGTATCGTGGACGAGGGAAGTACAGCATCGAACAAGCAGGAATCTTTCGAATCATCGAGCAACGAGGACGCGGCATTGAAGCCTGACCAGCTTGGCGATTTGAGTCATCGCTACTTCACGCATTTCACGGAAGTCTGTCCGGTCTGTAGTCGTCGATTTAGAAGCATAAAATGGCTGAAGGCTCATCTTCTCGGTGATCATGGAAAAGtgggaattgaaaaatggcgCGAGCTCGAGAACCAGTatcaaaattcatcgagaggAGGCGCGAGGGGTGGCGCAGCTGGTGGCGGCGTAACGAGCAGAATAGCTGCACAGAATCAAAGCATAAAAATCCCAAACGGATTGGAAATGGTTCAACAGCAAATGAAGAACAACGATTACATCGGTCTGGGGAACCAGGTTCTCTCCAGTCTTTTTGGCTCGACGACCGAGGACCAACAGAGCAAAAGTTATCGATGCTCCTACTGCAATTTTACAACGACGGTCTTGCCATTCCTGTTTCTCCACGAGAGATCGCACACGAGCCCTCAGGACAGTAATCCAAGTGGAGAAAGCGGTTCGATCTTGTGTCCGATATGCTCTCAGGCTTTTGGTCAACCCGAGTTACTGCAACATCATCTGTTAACGCGTCATCAATTCTCAGGTTTGCTCTCACAAATACCCGCACCGTTGATCAACAGTCCGCGGCTCGAGACAGGCAATAATGAGATTTATGAGAAAACCGAGTACGAGGCAAAGGAGGAACATCGTCAATCAAGTCCTCAAGTTTCTCTCGGAGGAAACAGCGAGTCTCCGATAAAGAGTCAAAAGCCTGAAGAGCcagtggtccaggtgacgccTCAAGGAGCATACAAGTGTGCACAGTGCGGTTATGCCTCGGCGAACCTCAACAGAATTAAGAAGCACGTTAGAAAAGATCATAAAGCGTTGGGTGACGCGACGGAAAGTGTTATCGACGAGTTGAGCAAAACGTTGAGGGACGTTGCGAACAAGCACAAGTTACCAGCGAGTTACGCGATGCCGCAAGACATGAATTCGAATCCTGATGGAACGACGGTCATGCAACCGTTTTTGATCGAGGAGCGAGACATTGCTGGAAAGATGGGCGACGAGATGAGCCAGGAGAAACGTTTTGCACCTGCTCTCGTTTATTTACCGGTAAGAGCAAGGATAAACAGTTCCTTAACGACCTCCTTCACCCTCAGTCCCGCCTGA
Protein Sequence: MASTVAREQLGMMMEQQISEIDSESSSSCEDRDARKRSREDPDNNLGGGSPKKRRKQTTPVRFPTSLMGNNGERNESEDEEEEEEEEEEEDEEDEEEQLVDENDLEGETEPGETRNSGATTRINEADDTLLEGKPRTLSPQAFVRNIIGQTTTALGTMATFAKDENLNSEFRCQFCALSFNDNESLSRHLECEHAIVCNAAPSSSPLSDQVKVKLEPSSQILEDPESPVNLSGLGVKSFASNWLNSQAQSQQQQIQLQSQNPEDWTSPSPVSSVPNHLQALSFPGALAQYLPLPGFSLTDAGQLSRPPVGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPLQNPGDNGLPPGAIPPGMFTGAFAGGSLVKSEQSQRLEVPTPLVSVPLSNTVACDLCQKRFKNDDSLRKHKQKVHNESIDNQESHSLPATTSSSVDEDREVSRNSPSAMETLFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYVQESEKPPSNPGNAATWHQIQTSPLNLIVTEGTAGSSSESGDRPGEDFECKPCGIRFQTLGLYRAHRAKMHETEDTAKQDFDADPTDQRSDSISEDLQKLQTMILQINGLEASKTLNCGICGRECENFAALRTHMRLEHGGIADEISSQINENSLNGTSTFCTICEKEYQTPEALRQHITEEHQQSNPTNVSTTIPSQTPTISPTVSAPTSIPAVTTPVTIPAASTGLVQTPTVAQPERKITSMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEGSTASNKQESFESSSNEDAALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKVGIEKWRELENQYQNSSRGGARGGAAGGGVTSRIAAQNQSIKIPNGLEMVQQQMKNNDYIGLGNQVLSSLFGSTTEDQQSKSYRCSYCNFTTTVLPFLFLHERSHTSPQDSNPSGESGSILCPICSQAFGQPELLQHHLLTRHQFSGLLSQIPAPLINSPRLETGNNEIYEKTEYEAKEEHRQSSPQVSLGGNSESPIKSQKPEEPVVQVTPQGAYKCAQCGYASANLNRIKKHVRKDHKALGDATESVIDELSKTLRDVANKHKLPASYAMPQDMNSNPDGTTVMQPFLIEERDIAGKMGDEMSQEKRFAPALVYLPVRARINSSLTTSFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263801;
90% Identity: iTF_00263801;
80% Identity: -