Basic Information

Insect: Ophion ellenae
Gene Symbol: -
Assembly: GCA_963210295.1
Location: OY723386.1:46612458-46616171[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.037 4.9 8.7 0.4 1 20 159 178 159 179 0.96

2 13 0.012 1.6 10.2 4.6 2 23 314 336 314 336 0.91

3 13 2.2e-05 0.0028 18.8 0.9 2 23 391 413 390 413 0.95

4 13 6.7 8.7e+02 1.6 7.6 3 23 500 521 499 521 0.95

5 13 0.045 5.8 8.4 0.2 1 23 572 595 572 595 0.95

6 13 0.021 2.8 9.4 0.2 3 23 644 665 642 665 0.93

7 13 0.039 5.1 8.6 0.1 3 23 688 709 686 709 0.92

8 13 0.16 20 6.7 4.4 2 23 777 799 776 799 0.96

9 13 0.012 1.6 10.2 2.4 2 23 813 835 812 835 0.94

10 13 0.00083 0.11 13.9 0.1 2 23 880 902 880 902 0.93

11 13 0.055 7.2 8.1 1.6 1 23 981 1003 981 1003 0.98

12 13 0.00025 0.032 15.5 1.0 3 23 1021 1042 1020 1042 0.98

13 13 0.044 5.7 8.4 0.5 1 23 1118 1141 1118 1141 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.037	4.9	8.7	0.4	1	20	159	178	159	179	0.96
2	13	0.012	1.6	10.2	4.6	2	23	314	336	314	336	0.91
3	13	2.2e-05	0.0028	18.8	0.9	2	23	391	413	390	413	0.95
4	13	6.7	8.7e+02	1.6	7.6	3	23	500	521	499	521	0.95
5	13	0.045	5.8	8.4	0.2	1	23	572	595	572	595	0.95
6	13	0.021	2.8	9.4	0.2	3	23	644	665	642	665	0.93
7	13	0.039	5.1	8.6	0.1	3	23	688	709	686	709	0.92
8	13	0.16	20	6.7	4.4	2	23	777	799	776	799	0.96
9	13	0.012	1.6	10.2	2.4	2	23	813	835	812	835	0.94
10	13	0.00083	0.11	13.9	0.1	2	23	880	902	880	902	0.93
11	13	0.055	7.2	8.1	1.6	1	23	981	1003	981	1003	0.98
12	13	0.00025	0.032	15.5	1.0	3	23	1021	1042	1020	1042	0.98
13	13	0.044	5.7	8.4	0.5	1	23	1118	1141	1118	1141	0.98

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGTGAGCAATTGGTGATGACGATGGATCAGCAGATAAGCGAGATCGACAGCGAGAGTTCGAGCAGTTGCGAGGATCGCGAGGCGCGAAAACGATTGCGCGAGGATGCGGAAAACACAAGCGGTGGCAGTCCGAAGAAGCGTCGGAAGCAAACAACACCGGTGAGATTTCCAACGTCATTGACGACCAACAGCGATGACAGGCTAGAGTCCGAGGCGGAGGAAGAAGACGGAGACGAGAACATGGAAGAGAACGAGTTGGAGGACGGCGAAGATGAGGCGGTTGAGACAGCGGTCAGAATTGCCAGGGATGAAGACGAGGCGCCCAACGAAACACTTCCGGAAGGTAAGCCAAGAACGATATCACCGCAGGCGTATGTGCAAAGTATGATCGGCCAAACGACAACAGGAACAGGAACAATGCCAACGTTCGCGAAAGACGAGAATCTCAACAGTGAATTTCGCTGTCAATTCTGCGCTCTTACCTTCGACGACAAGGACACGATGTCGCGACATCTAGAATGCGAGCATGCGATCCTTTGCAACGCGTTGCAAGCCGCCCCGAGTAATTCACCGTTGTCCGATCAAGTTAGGGTTAAGCTAGAGCCGTCGATTCAGATCCTCGAGGATCCCCCCGAGAGTCCCGTCAATCTTTCGGGCCTAGGCATCAAAAGTTTCGCCGCCAATTGGCTGAATTCCCAAGCGCAGGTGCATCAGCAACAGATGCAACTACAGTCGCAAAATCCAGACGGTTGGACCTCACCAAGTCCCGCAACTTCCGTTCCAAGTCATCTCCAAGCCCTTACGTTTCCCGGTGGTCTAGCGCAGTATCTCCCCCTACCGGGCTTTTCCCTCGCCGACGCTGGACAACTCAGCCGTCCGCCCGTTGGACCGGTACCCATCAGAATCTTCAATCCGGACGCGTATTGTGATCTTTGCAACAAGGAGTTTTGCAACAAGTACTTTCTCAAGACCCACAAAGCGAACAAACACGGTATCTACGTGGATGCACCCTGTCAGAATCCCGTTGATAATGGAATTCCCGGTGGCATGTTCTCCGGTGCGTTCGCCGTTGGTGGTGGCGTCAAATCGGAACAGCCCCAAAGGCTCGAAGTGCCCGCCCCGATGGTATCCGTACCTTCGAGCAACACCGTGCCCTGCGACGTCTGCCAGAAACGCTTCAAGAACGAGGACTCGTTGAGGAAGCACAAGCAAAAGGTTCACAATGATTCCATCGATAATCAGGAGTCCCATTCGCTTCCTGCAACGAGTAGCAGCGTCGACGAGGATCGCGAAGGTTCCCGCAACAGTCCTAGCGCGATGGAGTCACTTTTCAAGCAGGAATTCGGTGTTGAGCAAGAGGACTCGAAGTTCATGCCGGCACCACGACATCTCTCGCCCCAGTCGAGCCAACAAGCCAGAGACTCGGGCTTCAACGTTGATCGCCTTCGAAGGTTGGGCGTCATTAATCCCGAGGCATTTTGCGAGATATGCTGCAAGGAATATTGCAACAAGTATTTCCTGCGCACCCACAAGATGAAGAGACACGGCATATACGTCCAGGAGAGCGAGAAACCACCCAGCAATCCTGGCAACGCTGCAACCTGGCATCAGATACAGACGAGTCCACTGAATCTCATAGTGACGGATGGCAATGCCGGAAGTTCCTCGGAATCGGGTGATCGCCCGAGCGAAGATTTCGAGTGCAAACCCTGCGGTATCCGCTTTCAAACGTTGGGACTCTATCGCGCGCATCGCGCCAAAATTCACGACAGCGACGGGTCCAAATCGCCCAAGCAAGAGTTCGAAATGGATCTTACGGATCAACGAACCGATTCCATTTCCGAGGACCTTCAGAAACTCCAAACGATGATACTGCAAATCAACGGTCTGGAATCAAGCAAAACGTTGAACTGCGGCGCGTGCGGCCGTGAGTGCGAGAACATCGGTGCTCTGAGGAGCCACATGAGACTGGAACACGGTGGAATAAACGAGGAACTTTCCGCGCAATCCAACGAAAATTCACTCAACGGAACCTCGACGTTCTGCACGATTTGCGAGAAGGAATATCAGACGCCGGAAGCGCTTGGGCAACATATCACGGAAGAACATCAGCGTAGCCCTAACAATATCTCGTCAACGATCTCTCCGCGGCTACCTCAGCAGGGTATTTCACCAAGCGTCTCGCTTCAAGGTTCCGTTACCGCAGTGACAACATCGGTAACGGTGCCCGCCCCGTCCACGGGCTTGGTGCAAACACCCGCAGCACCGCAGCCCGAAAGAAAGATCACCTCGATGACCCCGACATCGAGCTATTGCGAGCTCTGCCGCAAAGAACTGTGCAACAAGTACTTCATGAAAACGCACATGCAGAAAATGCACAACATCGAGATAGAGAATGGATCGCAGATAGGTGGTGTGGTCTGCAACATATGCAACAAGGAGCTGTGCAGCAAGTACTTTCTGCGCGTGCACAAACAAAATACCCACGGTATAGTCGACGAGGGTAGCACCGCGTCGAACAAGCAAGAAACTTACGAATCGTCGAGCAACGAGGACACGGCGCTGAAGCCCGATCAGCTTGGCGATTTGAGCCATCGTTATTTCACACATTTCACCGAAGTCTGTCCGGTCTGTAGTCGACGTTTCAGAAGTATCAAGTGGCTGAAGGCCCATCTCCTCGGGGATCATGGAAAGGCAGGTATCGAGAAGTGGCGTGAGCTCGAGAATCAGTATCAAAACTCTTCGAGAGCAGGCGTAAGAGGTGTAACGAGCAAAGCCGGTGGGCAAAGTCAGAGCATCAAGATACCCAATGGATTGGAGATGGTGCAGCAACAGCTGAAGAACAACGATTACGCAGGCCTTGGCAATCAAGTTTTGTCGAGTCTCTTTGGTGCGACGACTGATGAACAGCAGACCAAGAGTTATCGTTGCTCTTATTGCAACTTCACGACGACCGTTTTGCCATTTTTGTTTCTCCACGAGAGATCGCACACGAGCCCCCGGGACAACAGTAATCCAGGAATGGACAGCGGTTCCCTATTGTGTCCGATATGCTCCCAGGTCTTCGCTCAACCCGAGCTTTTGCATCATCATCTGCTGACGCGTCATCAGTTCTCGGGCCTGTTGTCCCAATTGCCTGGCCCCTTGATGGGCAATCCGAGGCTCGAGGCTGCAAGTTCCGAGAAAAACCACGACAACTACGACAAAGGCGAGTACGGGGGCAAGGAGGATCATCGCCAGGGCAGCCCCCATGTTTCATCGGCAAACATGGAATCGTCACCGAAGAGCCAAAAGAAGGAGGAAGCCGCCGTACAAGTCACAGCTCAGGGTGCCTACAAGTGTGCTCAGTGCGGCTTCGCCACGGCCAATCTCAACAGGATTAAAAAACACGTTCGGAAGGATCACAAGACACTCGGGGACGCTACCGAGAGTGTTATAGATGAGCTGAGCAAAACACTTAGGGATGTTGCGAACAAGCACAAACTACCGGCAAGTTACGCAATGCCTCAGGACATGAATTCAAATCCAGACGCTACGACCATCATGCAACCATTCTTGATAGAGGAACGGGACGTCGGGCTAATAGGCGATGAAACGAGCCAGGAAAAACGTTTCGCACCTGCCCTCGTCTATTTGCCAGTCAGAGCAAGGATTAACAGTTCCCTCACGGCATCATTCACCCTCAGTCCTGCCTGA
Protein Sequence: MASTVAREQLVMTMDQQISEIDSESSSSCEDREARKRLREDAENTSGGSPKKRRKQTTPVRFPTSLTTNSDDRLESEAEEEDGDENMEENELEDGEDEAVETAVRIARDEDEAPNETLPEGKPRTISPQAYVQSMIGQTTTGTGTMPTFAKDENLNSEFRCQFCALTFDDKDTMSRHLECEHAILCNALQAAPSNSPLSDQVRVKLEPSIQILEDPPESPVNLSGLGIKSFAANWLNSQAQVHQQQMQLQSQNPDGWTSPSPATSVPSHLQALTFPGGLAQYLPLPGFSLADAGQLSRPPVGPVPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPCQNPVDNGIPGGMFSGAFAVGGGVKSEQPQRLEVPAPMVSVPSSNTVPCDVCQKRFKNEDSLRKHKQKVHNDSIDNQESHSLPATSSSVDEDREGSRNSPSAMESLFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYVQESEKPPSNPGNAATWHQIQTSPLNLIVTDGNAGSSSESGDRPSEDFECKPCGIRFQTLGLYRAHRAKIHDSDGSKSPKQEFEMDLTDQRTDSISEDLQKLQTMILQINGLESSKTLNCGACGRECENIGALRSHMRLEHGGINEELSAQSNENSLNGTSTFCTICEKEYQTPEALGQHITEEHQRSPNNISSTISPRLPQQGISPSVSLQGSVTAVTTSVTVPAPSTGLVQTPAAPQPERKITSMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEGSTASNKQETYESSSNEDTALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKAGIEKWRELENQYQNSSRAGVRGVTSKAGGQSQSIKIPNGLEMVQQQLKNNDYAGLGNQVLSSLFGATTDEQQTKSYRCSYCNFTTTVLPFLFLHERSHTSPRDNSNPGMDSGSLLCPICSQVFAQPELLHHHLLTRHQFSGLLSQLPGPLMGNPRLEAASSEKNHDNYDKGEYGGKEDHRQGSPHVSSANMESSPKSQKKEEAAVQVTAQGAYKCAQCGFATANLNRIKKHVRKDHKTLGDATESVIDELSKTLRDVANKHKLPASYAMPQDMNSNPDATTIMQPFLIEERDVGLIGDETSQEKRFAPALVYLPVRARINSSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263801;
90% Identity: iTF_01102324; iTF_01103092; iTF_01103811; iTF_01100887;
80% Identity: -