Basic Information

Insect: Campoletis raptor
Gene Symbol: -
Assembly: GCA_948107755.1
Location: OX403625.1:12174627-12178370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0058 0.49 10.9 0.3 1 20 167 186 167 187 0.96

2 13 0.0093 0.79 10.2 4.6 2 23 318 340 318 340 0.91

3 13 6.6e-05 0.0056 17.0 0.9 2 23 400 422 399 422 0.95

4 13 5.2 4.5e+02 1.6 7.6 3 23 509 530 508 530 0.95

5 13 0.034 2.9 8.4 0.2 1 23 581 604 581 604 0.95

6 13 0.00052 0.044 14.2 0.5 2 23 650 672 649 672 0.95

7 13 0.00061 0.052 14.0 0.1 3 23 695 716 693 716 0.93

8 13 0.12 10 6.7 4.4 2 23 759 781 758 781 0.96

9 13 0.0093 0.8 10.2 2.4 2 23 795 817 794 817 0.94

10 13 0.00064 0.055 13.9 0.1 2 23 862 884 862 884 0.93

11 13 0.043 3.7 8.1 1.6 1 23 967 989 967 989 0.98

12 13 0.00016 0.014 15.8 0.4 3 23 1006 1027 1005 1027 0.98

13 13 0.013 1.1 9.8 0.4 1 23 1103 1126 1103 1126 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0058	0.49	10.9	0.3	1	20	167	186	167	187	0.96
2	13	0.0093	0.79	10.2	4.6	2	23	318	340	318	340	0.91
3	13	6.6e-05	0.0056	17.0	0.9	2	23	400	422	399	422	0.95
4	13	5.2	4.5e+02	1.6	7.6	3	23	509	530	508	530	0.95
5	13	0.034	2.9	8.4	0.2	1	23	581	604	581	604	0.95
6	13	0.00052	0.044	14.2	0.5	2	23	650	672	649	672	0.95
7	13	0.00061	0.052	14.0	0.1	3	23	695	716	693	716	0.93
8	13	0.12	10	6.7	4.4	2	23	759	781	758	781	0.96
9	13	0.0093	0.8	10.2	2.4	2	23	795	817	794	817	0.94
10	13	0.00064	0.055	13.9	0.1	2	23	862	884	862	884	0.93
11	13	0.043	3.7	8.1	1.6	1	23	967	989	967	989	0.98
12	13	0.00016	0.014	15.8	0.4	3	23	1006	1027	1005	1027	0.98
13	13	0.013	1.1	9.8	0.4	1	23	1103	1126	1103	1126	0.98

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGTGAACAATTGGGGATGATGATGGAGCAGCAAATAAGTGAAATCGACAGTGAGAGTTCGAGCAGTTGCGAGGACAGAGAAGCGCGAAAACGTTTGCGGGAGGATGCGGACAGCAACCTTGGTGGCAGTCCGAAAAAACGTCGGAAGCAAACGACACCAGTTAGATTTCCAACGTCGTTGATGAGCAACAACGGCGAGAGGAACGAGTCCGAGGACGAGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAAGAGGAAGACGAGGAACAACAGGAGGAGAACGATTTCGAGGGTGAGACCGAACCGGGCGAGAGAAGGAACAACGGAGCAACAATCCGGACGAACGAAGCTGACGAAACGCTGCTGGAAGGTAAGCCAAGAACGTTATCACCGCAAGCGTATGTGCGAAATATCATCGGCCAAACGACAACGGCTACGGGCACGATGGCAACTTTCGCCAAAGACGAGAATCTCAACAGTGAATTTCGCTGTCAATTCTGCGCTCTTTCGTTCAACGACAACGAATTATTGTCACGACATTTAGAATGCGAGCATGCGATAGTTTGTAACGCGGCGACGAGCAATTCACCGATCTCCGATCAAGTTAGGGTCAAACTAGAACCGTCGAGTCAGATCCTCGAGGATCCTGAGAGTCCGGTCAACCTTTCGGGTTTGGGTGTCAAAAATTTTGCCGCTAATTGGCTCAATTCTCAAGCCCAAGTGCAACAACAACACATTCAATTACAGTCTCAAAATCCAGAAGATTGGACATCCCCCAGTCCCGTTACTTCCGTTCCCAATCATCTTCAAGCTCTCACTTTCCCTGGTGCACTTGCCCAGTATCTCCCTCTGCCAGGATTTTCCCTCACGGATGCCGGTCAACTGACACGGCCGCCCGTCGGACCAGCACCCATAAGAATTTTCAATCCCGACGCGTATTGTGATCTTTGCAACAAAGAATTTTGCAACAAGTATTTTCTCAAGACCCACAAAGCCAACAAGCATGGAATTTACGTGGATGCACCTTCGCAAAATCCTGGTGATAATGGTATGCCACCGGGAGGTATTCCACCCGGTATGTTCACCGGAGCATTCGCTGGTGGAACTATCGTTAAATCGGAACAATCCCAAAGGCTCGAAGTTCCTACTCCGCTAGTTTCCGTACCCTTGAGCAACACAGTACCTTGTGACGTGTGTCAAAAGCGTTTCAAAAACGATGATTCACTAAGAAAACACAAGCAAAAGGTTCACAACGAATCAATCGATAATCAGGAATCCCATTCACTGCCAGCGACGAGTAGTAGCGTGGACGAGGATCGTGAAGTTTCTCGAAATAGTCCTAGCGCCATGGAGGCACTTTTCAAGCAAGAATTCGGGGTCGAACAAGAAGATTCGAAATTTATGCCTGCGCCGCGCCACCTGTCACCACAATCGAGCCAACAAGCAAGAGACTCGGGTTTCAATGTCGATCGTCTCAGACGACTCGGTGTCATCAACCCTGAGGCATTCTGTGAAATTTGTTGTAAAGAATATTGCAACAAGTATTTCCTACGAACACATAAAATGAAGAGACACGGCATTTATGTCCAAGAGAGCGAAAAACCACCCAGCAATCCTGGCAACGCGGCAACGTGGCATCAGATTCAAACGAGTCCTTTGAACCTCATCGTAACTGATAGCAATGCCGGTAGTTCCTCAGAATCTGGTGATCGTCCTGGAGAAGATTTCGAGTGTAAACCTTGTGGCATTCGTTTCCAAACCTTGGGACTGTACCGTGCTCATCGGGCTAAAATCCACGAAACAGACGAGTCGTCCAAGCAGGATTTCGACACGGATCCGACGGACCAACGAAGCGATTCCATTTCCGAGGATCTGCAGAAACTTCAGACCATGATTTTACAAATAAACGGCCTGGAAGCCAGCAAAACTTTGAACTGCGGAATATGCGGCAGAGAGTGCGATAATTTCGGTGCTCTGCGAACTCACATGAGACTGGAACACGGTGGAATCGCTGATGAAATCTCTTCGCAGACAAACGATAATTCGCTCAATGGCACATCGACCTTCTGCACGATCTGCGACAAGGAATACCAAACTCCGGAAGCTCTGAGGCAACATATCACTGAGGAACATCAACAGACATCAATACCTGCGGTTACAACTCCCGTCACGATTCCAACGCCATCTGTAGCATTAGTTCAAACTCCAACCGTCCCACAGCCCGAGAGAAAAATCACTTCGATGACACCAACCTCAAGTTACTGCGAATTGTGTCGCAAGGAATTGTGCAACAAGTATTTCATGAAGACACACATGCAAAAGATGCACAACATCGAGATTGAAAACGGTTCGCAAATCGGTGGCGTAGTGTGCAACATATGCAACAAAGAATTGTGCAGCAAATATTTTCTACGGGTACACAAGCAAAACACTCATGGTATCGTTGACGAGGGAAGCACAGCGTCAAACAAACAAGAATCGTTCGAATCATCGAGCAACGAAGACGCGGCATTGAAACCTGATCAGCTCGGGGATTTGAGTCATCGTTATTTTACTCATTTTACGGAAGTATGTCCAGTGTGTAGTCGTCGATTTCGAAGTATTAAATGGCTCAAGGCTCATCTTCTTGGTGATCATGGAAAAATAGGAATTGAAAAATGGCGCGAGCTCGAGAATCAATATCAAAATTCATCGAGAGGAGGCGCGAGGAACTCGGGAGGTGGAGTTGCAGGCAGAATAGTTGCGCAAAATCAAAGCATCAAAATACCAAACGGATTGGAAATGGTTCAACAGCAAATGAAGAACAACGATTACGTTGGTCTGGGAAATCAGGTGCTGTCCAGTCTTTTTGGCTCGACGACGGAGGACCAACAGAGCAAAAGTTATCGCTGCTCCTACTGCAACTTTACGACAACAGTTTTACCCTTTTTGTTTCTTCACGAGAGATCCCATACGAGCCCTCAGGATAATAATTCAAGCGCTGAAAGCGGTTCGATTTTGTGTCCGATTTGCTCACAGGCATTTGGTCAAGCCGAACAACTGCAACATCATCTGTTAACGCGACATCAATTCTCCGGATTACTGTCTCAAATGCCTGCTCCATTGATCAACAGTCCAAGACTCGAGGCAGGTAGTGTCGAAAAGAATAATGAGATTTATGAGAAAGTTGAGTACGAAGGAAAGGAGGAAAATCGTCAATCAAGTCCCCAAGTTTCTTTAGCAAACACCGAGTCTCCGATAAAGAGCCAAAAACCTGAAGAGCCAGTGGTTCAGGTAACACCTCAAGGAGCTTATAAATGTGCTCAGTGCGGTTACGCGACTGCTAATCTCAACAGGATCAAAAAACACGTTAGAAAAGATCACAAAGCAATGGGTGACGCGACTGAGAGTGTTATCGACGAATTAAGTAAGACACTGAGAGACGTTGCGAACAAACACAAATTACCAGCGAGTTACGCGATGCCACAAGACCTCAATTCGAATCCTGACGCTACGACGGTAATGCAACCATTTTTCATCGAGGAAAAGGACATCGCTGGTAAAATGGGTGATGAAATGAGCCAAGAGAAACGTTTTGCACCTGCCCTCGTTTATTTGCCGGTAAGAGCAAGGATCAACAGTTCCCTCACGACCTCCTTCACCCTAAGTCCTGCCTGA
Protein Sequence: MASTVAREQLGMMMEQQISEIDSESSSSCEDREARKRLREDADSNLGGSPKKRRKQTTPVRFPTSLMSNNGERNESEDEEEEEEEEEEEEEDEEQQEENDFEGETEPGERRNNGATIRTNEADETLLEGKPRTLSPQAYVRNIIGQTTTATGTMATFAKDENLNSEFRCQFCALSFNDNELLSRHLECEHAIVCNAATSNSPISDQVRVKLEPSSQILEDPESPVNLSGLGVKNFAANWLNSQAQVQQQHIQLQSQNPEDWTSPSPVTSVPNHLQALTFPGALAQYLPLPGFSLTDAGQLTRPPVGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPSQNPGDNGMPPGGIPPGMFTGAFAGGTIVKSEQSQRLEVPTPLVSVPLSNTVPCDVCQKRFKNDDSLRKHKQKVHNESIDNQESHSLPATSSSVDEDREVSRNSPSAMEALFKQEFGVEQEDSKFMPAPRHLSPQSSQQARDSGFNVDRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYVQESEKPPSNPGNAATWHQIQTSPLNLIVTDSNAGSSSESGDRPGEDFECKPCGIRFQTLGLYRAHRAKIHETDESSKQDFDTDPTDQRSDSISEDLQKLQTMILQINGLEASKTLNCGICGRECDNFGALRTHMRLEHGGIADEISSQTNDNSLNGTSTFCTICDKEYQTPEALRQHITEEHQQTSIPAVTTPVTIPTPSVALVQTPTVPQPERKITSMTPTSSYCELCRKELCNKYFMKTHMQKMHNIEIENGSQIGGVVCNICNKELCSKYFLRVHKQNTHGIVDEGSTASNKQESFESSSNEDAALKPDQLGDLSHRYFTHFTEVCPVCSRRFRSIKWLKAHLLGDHGKIGIEKWRELENQYQNSSRGGARNSGGGVAGRIVAQNQSIKIPNGLEMVQQQMKNNDYVGLGNQVLSSLFGSTTEDQQSKSYRCSYCNFTTTVLPFLFLHERSHTSPQDNNSSAESGSILCPICSQAFGQAEQLQHHLLTRHQFSGLLSQMPAPLINSPRLEAGSVEKNNEIYEKVEYEGKEENRQSSPQVSLANTESPIKSQKPEEPVVQVTPQGAYKCAQCGYATANLNRIKKHVRKDHKAMGDATESVIDELSKTLRDVANKHKLPASYAMPQDLNSNPDATTVMQPFFIEEKDIAGKMGDEMSQEKRFAPALVYLPVRARINSSLTTSFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00263801;
90% Identity: iTF_00263801;
80% Identity: -