Basic Information

Insect: Calameuta idolon
Gene Symbol: -
Assembly: GCA_030142285.1
Location: JARQSV010000387.1:125905-128470[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.044 3.2 8.5 0.2 1 23 2 24 2 24 0.98

2 19 0.72 52 4.6 2.6 3 23 32 53 30 53 0.94

3 19 1.1e-05 0.00082 19.8 1.3 1 23 59 81 59 81 0.97

4 19 0.00077 0.056 14.0 0.9 1 23 85 107 85 107 0.98

5 19 1.9e-05 0.0014 19.1 1.3 3 23 115 135 113 135 0.96

6 19 3.1e-06 0.00023 21.5 0.3 1 23 141 163 141 163 0.98

7 19 0.025 1.8 9.2 0.9 1 23 170 192 170 192 0.97

8 19 4.8e-06 0.00035 20.9 0.1 1 23 197 219 197 219 0.99

9 19 2e-05 0.0015 19.0 0.4 1 23 225 247 225 247 0.96

10 19 7.1e-06 0.00051 20.4 1.1 1 22 253 274 253 274 0.96

11 19 0.0027 0.19 12.3 1.0 1 20 360 379 360 382 0.93

12 19 2.4e-05 0.0017 18.8 1.7 2 23 416 437 415 437 0.95

13 19 0.00018 0.013 16.0 2.2 1 23 441 463 441 463 0.97

14 19 0.00015 0.011 16.3 1.0 3 23 471 491 470 491 0.97

15 19 1.5e-05 0.0011 19.4 4.5 2 23 498 519 497 519 0.96

16 19 1.7 1.2e+02 3.5 4.3 1 23 528 550 528 550 0.88

17 19 0.1 7.5 7.3 0.1 2 23 557 577 556 577 0.94

18 19 5.9e-07 4.3e-05 23.8 1.3 2 23 584 605 584 605 0.97

19 19 2.4e-07 1.7e-05 25.0 1.9 1 23 611 633 611 633 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.044	3.2	8.5	0.2	1	23	2	24	2	24	0.98
2	19	0.72	52	4.6	2.6	3	23	32	53	30	53	0.94
3	19	1.1e-05	0.00082	19.8	1.3	1	23	59	81	59	81	0.97
4	19	0.00077	0.056	14.0	0.9	1	23	85	107	85	107	0.98
5	19	1.9e-05	0.0014	19.1	1.3	3	23	115	135	113	135	0.96
6	19	3.1e-06	0.00023	21.5	0.3	1	23	141	163	141	163	0.98
7	19	0.025	1.8	9.2	0.9	1	23	170	192	170	192	0.97
8	19	4.8e-06	0.00035	20.9	0.1	1	23	197	219	197	219	0.99
9	19	2e-05	0.0015	19.0	0.4	1	23	225	247	225	247	0.96
10	19	7.1e-06	0.00051	20.4	1.1	1	22	253	274	253	274	0.96
11	19	0.0027	0.19	12.3	1.0	1	20	360	379	360	382	0.93
12	19	2.4e-05	0.0017	18.8	1.7	2	23	416	437	415	437	0.95
13	19	0.00018	0.013	16.0	2.2	1	23	441	463	441	463	0.97
14	19	0.00015	0.011	16.3	1.0	3	23	471	491	470	491	0.97
15	19	1.5e-05	0.0011	19.4	4.5	2	23	498	519	497	519	0.96
16	19	1.7	1.2e+02	3.5	4.3	1	23	528	550	528	550	0.88
17	19	0.1	7.5	7.3	0.1	2	23	557	577	556	577	0.94
18	19	5.9e-07	4.3e-05	23.8	1.3	2	23	584	605	584	605	0.97
19	19	2.4e-07	1.7e-05	25.0	1.9	1	23	611	633	611	633	0.99

Sequence Information

Coding Sequence: ATGTACGAGTGCGACTTTTGCGGGATGCGAATTCGGCTGAAGGACGTGTTCGCCGAGCACAGGCGGATTCACACCGGCGAGGAGCCCTACGGGTGTCAGAGCTGCGAGCAACGATTTTCCACGCATCAGAGACTCTACTATCACAGAATTCGCGAGCACATCCAGGACAAGCCCTTCTTCTGCAAAGTCTGCGGCAAAGCCTTCAAGCTTCGACAGTTCCTCAACGTCCACATGAAGATACACGACAAGGTTTTCATCTGCGACGTCTGCGGCGCTTCGACGGCTACGCTCTGCAATCTCGAGTATCACAAGAGACGTCACAACAAGGAATACGATCTCTTCTGCGAGACGTGCACCAAGGGCTTCTACACGAAGGCCAGCCTCCAGCAGCACATGACGACGCACTCGGGCGAGAAGCCCTTCCCCTGTCCTACCTGCGGCTCCTCCTTCAGCAGCCGGGGCTACCTCAAGCTCCACATGGCGAAGCACGGAAACCGCGAGAAGAAGTACGCCTGCGAATTCTGCGACTTTCGCAGCTGCTGGCGCGGCGCCCTGAAGGTTCACATGCGAATTCATACTGGGGAGAATTACGAGTGTCGCGTGTGCGGCAAATCGGTGTCCAGTAAGGCCTACTTGGGAATTCATATGCGAATTCACACGGGTGAGAAGCCGCACGCTTGCGAGATCTGCGGAAAGGCCTTCAGTGCTAGGAAGTATCTCAGGATTCATGGGCGCATCCACACCGGCGAGAAGCCTTACGAATGCTCATTCTGCCAGAAGAGATTCACTCAAAGAGGGACGCTCACTGCTCACCTCAGGCGTTTGGGGATAGGCGCTATAAGAAAAACGACAAAGAAGGTGAGTGTATCGAATCATTCGGCGGAAGTCCACTCTCGCCGGTTGAACCTTCGAGCAGCTTTGGATAGCGAGAAGAGTCAGAGtcagagggaggaggaggagcagggacagggacagggacaggagGGGTCTCCCGACGCGGTCGGAGACACGGGTCCTCAGTGCGATCCTGCGATCGTGCGCTTCGATAGAAGCCTTCAGGAAGGATACGGCGGGACACACGAGTGCGAAATATGCGGTATAAGCTTCCACGGTAAACTTCAGCTGAATAAGCATCGGCCGGTGCACGCGAAGATGTCTTCgcaaaagaagcaaaagaagcAAGCGCAAAAACACAAGCTTTCGAAAATGCGAAATGGCCAAGAAAAGTGTTCCCAGGGTCCGATCGAGTGCGCCGTCTGTCACAAAGttttcaagaagaagaagtactTGAACGTCCACATGACTCTTCACGGAGCGCCTCACATATGTCATGTTTGCGGCGCGAAGCTCACATCCGAGTATTATTTGAAGATCCACATAAGACGGCACAACAAGGAGTTCACGGAATTCTGTAAAGTCTGCAACAAGGGATTCTACCTGAAGGCCACTCTGAAGACGCACATGAGCGTCCACACGGACGAGAAGCCGTGCACGTGCGAGATTTGCCACAAGTCTTTCGGGAATCGCGTTTACCTCAGGAGCCACATGAAGATCCACAGCAGGCCGGAGACTAGAAAGAGATACAAGTGCGAGATATGCAGCTTCGAAACGTTTTACAGCTATTGCTACAAGGAGCACATGTGGACGCACACTGGCGAGAGTCAAGTGCCCTGCGAAGTGTGCGGAAAGCTCATTCGTCGGCAGTACATGAAGATTCACATTAGAATTCACACTGGCGAGAAGCCCGAGGTCTGTGAATTTTGCGGGAAAGCTTTCAGCTCGCGGAAGTACTTGATCAAGCACAGAAGGACGCACACTGGCGAGAGACCCTACAAGTGTAAGATCTGTGAGAAGAGATTTACTCAGCGTGGAACTCTGAGCGCACACCTCAGACGCCACGATGATCCAAAATGA
Protein Sequence: MYECDFCGMRIRLKDVFAEHRRIHTGEEPYGCQSCEQRFSTHQRLYYHRIREHIQDKPFFCKVCGKAFKLRQFLNVHMKIHDKVFICDVCGASTATLCNLEYHKRRHNKEYDLFCETCTKGFYTKASLQQHMTTHSGEKPFPCPTCGSSFSSRGYLKLHMAKHGNREKKYACEFCDFRSCWRGALKVHMRIHTGENYECRVCGKSVSSKAYLGIHMRIHTGEKPHACEICGKAFSARKYLRIHGRIHTGEKPYECSFCQKRFTQRGTLTAHLRRLGIGAIRKTTKKVSVSNHSAEVHSRRLNLRAALDSEKSQSQREEEEQGQGQGQEGSPDAVGDTGPQCDPAIVRFDRSLQEGYGGTHECEICGISFHGKLQLNKHRPVHAKMSSQKKQKKQAQKHKLSKMRNGQEKCSQGPIECAVCHKVFKKKKYLNVHMTLHGAPHICHVCGAKLTSEYYLKIHIRRHNKEFTEFCKVCNKGFYLKATLKTHMSVHTDEKPCTCEICHKSFGNRVYLRSHMKIHSRPETRKRYKCEICSFETFYSYCYKEHMWTHTGESQVPCEVCGKLIRRQYMKIHIRIHTGEKPEVCEFCGKAFSSRKYLIKHRRTHTGERPYKCKICEKRFTQRGTLSAHLRRHDDPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00252244;
90% Identity: iTF_01475622; iTF_00252244; iTF_00297729; iTF_00293898; iTF_00291713; iTF_00254509; iTF_00293135; iTF_00294656; iTF_00252986; iTF_00255249;
80% Identity: -