Bsel021398.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Boloria selene
Gene Symbol
nfxl1
Assembly
GCA_905231865.2
Location
HG993154.1:9333997-9336471[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.01 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 1.2e-07 0.0018 18.9 14.4 3 19 186 202 185 202 0.95
4 17 0.5 7e+03 -2.2 0.9 6 10 227 231 226 239 0.54
5 17 9.1e-09 0.00013 22.5 10.8 3 18 239 254 237 255 0.91
6 17 0.57 8e+03 -2.4 2.0 6 10 280 284 279 284 0.90
7 17 3.4e-09 4.8e-05 23.9 13.9 1 19 290 308 290 308 0.99
8 17 2.7e-06 0.038 14.7 15.5 3 19 345 361 337 361 0.86
9 17 6.7e-05 0.94 10.2 20.3 1 18 395 412 395 413 0.97
10 17 1.3e-09 1.8e-05 25.2 14.1 1 19 422 440 422 440 0.99
11 17 7.3e-05 1 10.1 6.1 9 19 488 498 486 498 0.90
12 17 0.059 8.4e+02 0.8 7.3 4 12 510 518 508 518 0.90
13 17 1.5 2.2e+04 -3.7 1.3 15 18 548 551 547 552 0.81
14 17 8.4e-06 0.12 13.1 5.3 1 11 588 598 588 599 0.98
15 17 0.00066 9.3 7.0 14.3 1 18 628 645 628 646 0.84
16 17 0.99 1.4e+04 -3.1 1.0 6 10 677 681 676 681 0.88
17 17 6.4e-07 0.0091 16.6 10.4 1 16 687 701 687 707 0.91

Sequence Information

Coding Sequence
ATGGCCAGACGATATCGTGATGCTGCTGCGAAATTGCAGCAAAATGTCCAGAAACATCTACAAGTCATGAAAGATCTTTCGTCCTCTGAAGAAGATGAACCCTTTGAGTCAAATGTCCTGGAAAGTGTGTTTCAGAGCTATTGGAGAGGGGGTGGTGACACACATATGCTTAATAGGACTAAGAATCTTCTGGAGGAAGCGATAAGTGGTCGCTCTGTCACCTGCTTGATTTGCATTGGTTCCATTAAAAGAGCTGATGCTATATGGACTTGCGACCATTGCTATTCTTATTTTCATATTTCTTGCATTCAGAAGTGGTCTAATGACAGTATAAGCTTGCGTAACGAAGAAAATCAAGGTCCAATTGCGGTGTTTTTACCCAAGAAAATAGAATGGTGCTGTCCTAAATGTAGACATTCATACACTAAAGAAGAAATACCACGTAAATATCGCTGCTTTTGTGGTAAAACTGATGACCCTCCGTACCATCCCTGGCTAATACCTCATACCTGTGGGGAAGTGTGTGGTAAAAGATTATCTACTGGTGATAATTGTATGCATAAATGTCTTTTATTATGTCACCCAGGGCCTTGTCCACCATGTCCACAAACTGTGAATGGAGCTTGCTACTGCAACAAGGAACGCAAGAGAGTAAGATGTAGTGCTGCCCAATGGTCATGTCATAAACCATGTAATAAAGGTTTACCTTGTAGATCTCACAAATGTGAAAACATTTGCCATGCAGGAGAATGTCCTCCTTGTAATTATACAAGCTTACAGTTTTGTCAATGTCAAGCGGAGAAAAGTAAGCGTCCATGTAACAATTTGGTATGGCAATGCCAAAAAGTATGTAATAAACCATTTGCCTGTGGTTATCATAAATGTGAGAAAACTTGTCATGCTGGAAGCTGTGGAACATGTCCAAATTCTGGCATCCGGTCATGCCCTTGTGGAGCAAATCAACGTTATATCCAATGTCCAGATGTTATTGAAACATGTCTTGGTACTTGTGGAAAGAAATATGAAGATTGTGAACACAATTGCCCAGCTAAATGTCACACGGGATCATGTCCACCTTGCCAAGTGCAGATCGAAAAGAGATGTCAATGCTTAACTCACACTAAGTCATTGCCTTGCAGCAAAGAGTTTAAATGTGATACAAAATGTAGAGGGATAAGACCATGCGGTAAACATGGCTGTGGGCGAAAATGTTGTAACGGTAACTGTCCCCCTTGTGAAAAGGTATGTGATAAATCATTACAATGTGGTCGTCACAAATGTACAACAATTTGTCATCGTGGACCCTGTTATCCATGTCCTCTAGAATCTAAAGTAACTTGTCGCTGTAAAGAGACATATGTGAGAGTTCCATGTGGAAGAGAAAGACACACTCGTCCACCTAAATGTAATCTTCCATGTAAAATTAAATATAAATGTGGTCATATAGAAGAAAATAAACATACCTGCCACTTTGGTGATTGCCCACCATGCAAAGCTATTTGTAACAAGAAATACCAAAACTGTGACCATCAGTGTACAGCAACTTGCCATGAATATGTACTTGTTACTTTTAAGCAGGTAGAAAAACCTGCAACACCATGGGAAGCTCAGCCGCCAAAGTCTAAAATAGTTGCCATGAAATGCACACCTTGTAATGCTCCTGTAACAGTCACATGTTTTGGTGAACATGAGACTGATAGTCAACCATGCTACAAAGCAAGTCGAAAACCTTGTGGCCGAGCATGTGGAAAACCATTATCTTGCGGTAATCACTTATGTGAACAATTATGTCACTTGTATAACTCAGACCCTGAGTACCCAAATGTGCCTTTTACATGTAAGGCATGCAACAGAGAGTGTTCAAAAGTCCGTCCAGAGAAATGCTCACACAAATGTGCAAAACGAGGCTGTCATCCCGGCATGTGTCCACCTTGTGATATAATGGAGAGAGTGTCATGTCATTGTGGTGTCACAGAACTATATTTTCGCTGTCGGGAACTATCAAGTACCACTGAAGAGACACTAAGTTGTAAGCAAATTTGTCCAAAGAATCTTGAGTGTGGTCATAGGTGTAGGAATATATGTCATTCAGGACCATGTGGAATAAATCAAATCTGTACTAAAAAGACTAAAATTCACTGCCCATGTGGTAATTTGAAAAAAGATGCTCCTTGCAATGCTGTAAGAAATGCTGAAGTCAGTATACAGTGTGACTCTAGTTGTGAAGATAAAAAGCAGGCTGCAAAGTTAGAGAAAGAACAACAAGAGAAGAGATTAAAGCAGCTAGAAGAAGAAAGAAATCGTAAAGAGTTAGAAGAGTATGAATGGAAGTTGAGTGGAAAGAAAAAGAAATACAAGGAGAAGAAAGTTATTGTGAATAAAGATGATAGAAGTCTAATGCAGAAATATTGGGTTCCTATTTTATCTATAGTAGTTCTTATTATAGCTGGTATTTACTACATTTTGTATATGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLQVMKDLSSSEEDEPFESNVLESVFQSYWRGGGDTHMLNRTKNLLEEAISGRSVTCLICIGSIKRADAIWTCDHCYSYFHISCIQKWSNDSISLRNEENQGPIAVFLPKKIEWCCPKCRHSYTKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSTGDNCMHKCLLLCHPGPCPPCPQTVNGACYCNKERKRVRCSAAQWSCHKPCNKGLPCRSHKCENICHAGECPPCNYTSLQFCQCQAEKSKRPCNNLVWQCQKVCNKPFACGYHKCEKTCHAGSCGTCPNSGIRSCPCGANQRYIQCPDVIETCLGTCGKKYEDCEHNCPAKCHTGSCPPCQVQIEKRCQCLTHTKSLPCSKEFKCDTKCRGIRPCGKHGCGRKCCNGNCPPCEKVCDKSLQCGRHKCTTICHRGPCYPCPLESKVTCRCKETYVRVPCGRERHTRPPKCNLPCKIKYKCGHIEENKHTCHFGDCPPCKAICNKKYQNCDHQCTATCHEYVLVTFKQVEKPATPWEAQPPKSKIVAMKCTPCNAPVTVTCFGEHETDSQPCYKASRKPCGRACGKPLSCGNHLCEQLCHLYNSDPEYPNVPFTCKACNRECSKVRPEKCSHKCAKRGCHPGMCPPCDIMERVSCHCGVTELYFRCRELSSTTEETLSCKQICPKNLECGHRCRNICHSGPCGINQICTKKTKIHCPCGNLKKDAPCNAVRNAEVSIQCDSSCEDKKQAAKLEKEQQEKRLKQLEEERNRKELEEYEWKLSGKKKKYKEKKVIVNKDDRSLMQKYWVPILSIVVLIIAGIYYILYM