Hcha010549.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius charithonia
Gene Symbol
nfxl1
Assembly
GCA_030704555.1
Location
CM060819.1:18708138-18710612[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 3 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.016 1.4e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 19 4.7e-07 0.0041 17.6 15.9 3 19 186 202 185 202 0.95
4 19 8e-07 0.007 16.9 13.8 3 18 239 254 237 255 0.91
5 19 1.5e-08 0.00013 22.4 10.4 1 19 290 308 290 308 0.98
6 19 2.8e-07 0.0025 18.3 18.5 3 19 345 361 337 361 0.84
7 19 1.9 1.6e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 19 0.00018 1.6 9.4 20.2 1 18 395 412 395 413 0.97
9 19 1.4e-08 0.00012 22.5 14.7 1 19 422 440 422 440 0.99
10 19 0.63 5.5e+03 -2.0 1.3 5 10 468 473 468 473 0.92
11 19 0.0011 9.6 6.9 4.9 9 19 488 498 486 498 0.89
12 19 0.038 3.3e+02 2.0 8.3 3 12 509 518 508 518 0.90
13 19 0.56 4.9e+03 -1.8 3.3 14 18 547 551 547 552 0.85
14 19 0.16 1.4e+03 -0.0 0.6 7 12 567 572 567 579 0.82
15 19 8.2e-06 0.072 13.7 4.6 1 11 588 598 588 599 0.97
16 19 3 2.6e+04 -4.9 1.3 9 11 615 617 613 618 0.61
17 19 0.0022 19 5.9 14.9 3 18 629 645 628 646 0.82
18 19 0.9 7.9e+03 -2.4 1.3 6 10 677 681 676 681 0.90
19 19 3.4e-07 0.003 18.1 11.0 1 16 687 701 687 707 0.91

Sequence Information

Coding Sequence
ATGGCTAGAAGATATCGTGATGCTGCTGCTAAATTGCAGCAAAACGTGCAGAAACATCTTCAGGTGATGAAAGATCTTTCTTCTTCTGAAGATGATGAGCCAGTTGAGTCGAGTGTCCTGGATACTGTATTCCAGAGCTACTGGCGGGGTGGCGGGGATACACAAATGCTTAATAGGACTAAACATCTACTAGAAGAAGCAATAAGTGGCCGAGCTGTGACCTGCTTGATTTGTATTGGATCTATCAAAAGAACCGACGCTATATGGACCTGCGatcattgttattgttatttccaTCTATCTTGTATACGGAAGTGGTCAAACGATAGTATAAGTCTACGCAGTGAAGAAACTAATGGCCCAATTGCTGTGTTCATgcctaaaaaaattgaatggtgTTGCCCAAAATGTAGAAATTCATACAATAAAGAGGAAATACCACGTAAATATCGCTGTTTCTGCGGTAAAACTGATGACCCTCCTTTCCATCCTTGGTTAATTCCTCATACTTGTGGAGAAGTATGTGGGAAAAGGTTATCAGTGGGTGATAATTGTAAGCATAAATGTCTTTTATTATGTCACCCTGGACCTTGCCCACCATGTCCTCAAACTGTTAATGGAGTTTGCTATTGTAACAAGGAGCATAAAAGAGTGAGATGTAGTGCTGCCCACTGGTCTTGTAAACAACAGTGTAACAAGAACTTACCTTGTAAATCTCATAAGTGTGAGGGTATTTGTCATGCTGGGGAATGCCCACCATGTAATTATACAAGTCTACAATCATGTCAATGTGGAGTGGAAAAGATAAAACGCCCATGCAACAGTTTAGTGTGGCAATGTCAAAAACAGTGTAATAAGCCATTTGCATGTGGGTTCCATAAATGTGACAGAGTATGTCATAGTGGTAGCTGTGGACTGTGTCCCAATTCTGGAGTCATATCTTGTCCCTGTGGTGCTAACCAACGATACATCCAGTGTCCAGATACTATTGAAACTTGCCTTGAAACTTGTGGAAAGAAATACGATGACTGTCAACATACTTGTCCATCTAAATGTCATAAAGGACCATGCCCACCTTGTCAAGTGCAGATTGAAAAGAAATGTCATTGTTCAACTCATACAAGACCACTGCCCTGTAGCAAAGAGTTCAGATGTGAGACTAAATGTAGAGGTATTAGACCTTGTGGCAAACATGGATGTGGAAGAAAATGTTGTAATGGGAGCTGTCCTCCATGTGAAAAACTGTGTGATAAGTCTCTGCAATGCGGCCGCCATAAATGTGCTATGATTTGTCATCATGGACCATGCTATCCATGTCCTCTTGAATCTAAAGTCACTTGCCGCTGTAAAGAGACATACATAACAGTTCCTTGTGGAAGAGAGAGACACACAAAACCACCTAAATGCAATCAACCATGTAAACTAAAGTATAAATGTGGCCATATTGATGAAAACAAACATTCCTGTCATTTCGGTGATTGTTCTCCATGCAAAGCAATTTGCAACAAGGCTTATAAGAAATGTGAACATAAATGTACAGCAACATGCCATGAATATGTACTGGTTACATTCAAACAAATTGAAAAGCCTGCTACACCATGGGAAGCTCAGCCGCCTAAATCAAAAATAGTTGCCTTAGAGTGTCCACCATGTGAAGCCCCCATTACACTAACATGTTTTGGAGAACACGAAACAGATGAACAACCTTGTCACAAAGCTAGTCGTCGACCATGCGGGAGGGCATGTGGTAAACCTCTGGCTTGTGGAAACCATTCATGTGAATTATTATGCCATTTATACAGCCAAGATGCTGACTATCCAAATGTGCCTTTTACATGTAAAGCTTGCCACAGAGAATGTTCTAAAATCCGTCCAGCCATGTGTACTCACAAATGTGCTAAGCGGGGTTGTCATCCTGGCCCGTGCCTACCTTGTGAGATCATGGAAAGAGTTTCTTGTCATTGTGGTGTAACAGAATTATATTTCCGCTGTAAAGAAGTGGCAAACACTAATGAGGAAACATTAAGTTGTAAACAAGTATGTCCAAAGAATTTGGAATGTGGACATCGCTGCAAAAACATCTGTCACTCTGGTCCATGTGGAGTAAACCAAATCtgtactaaaaaaactaaaatccaCTGCCCATGTGGTAATCTTAAAAGAGAGGCTTCTTGTAATGCTGTCAGAAATGCAGAAATCAAAGTAGAATGTGATTCCAGTTGTGAAACAAAGAAAGTGGCTGCAAAATTAGAAAAAGAACAACATCAGATAAGATTAAAATTACTTGAGGAAGAGAAAAATCGTAAAGAACTAGAAGAATATGAGTGGAAATTAAGtggaaaaaagaagaaatataaagaaaagaaattgaTTGTCAAAAAAGATGACCGAAATATGTTGCAGAAATATTGGGTTCCTATTTTATCGACAGCAGTTGTAATTTTGGCTGgtgtttactatattttttatatttag
Protein Sequence
MARRYRDAAAKLQQNVQKHLQVMKDLSSSEDDEPVESSVLDTVFQSYWRGGGDTQMLNRTKHLLEEAISGRAVTCLICIGSIKRTDAIWTCDHCYCYFHLSCIRKWSNDSISLRSEETNGPIAVFMPKKIEWCCPKCRNSYNKEEIPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSVGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCNKEHKRVRCSAAHWSCKQQCNKNLPCKSHKCEGICHAGECPPCNYTSLQSCQCGVEKIKRPCNSLVWQCQKQCNKPFACGFHKCDRVCHSGSCGLCPNSGVISCPCGANQRYIQCPDTIETCLETCGKKYDDCQHTCPSKCHKGPCPPCQVQIEKKCHCSTHTRPLPCSKEFRCETKCRGIRPCGKHGCGRKCCNGSCPPCEKLCDKSLQCGRHKCAMICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTKPPKCNQPCKLKYKCGHIDENKHSCHFGDCSPCKAICNKAYKKCEHKCTATCHEYVLVTFKQIEKPATPWEAQPPKSKIVALECPPCEAPITLTCFGEHETDEQPCHKASRRPCGRACGKPLACGNHSCELLCHLYSQDADYPNVPFTCKACHRECSKIRPAMCTHKCAKRGCHPGPCLPCEIMERVSCHCGVTELYFRCKEVANTNEETLSCKQVCPKNLECGHRCKNICHSGPCGVNQICTKKTKIHCPCGNLKREASCNAVRNAEIKVECDSSCETKKVAAKLEKEQHQIRLKLLEEEKNRKELEEYEWKLSGKKKKYKEKKLIVKKDDRNMLQKYWVPILSTAVVILAGVYYIFYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00214100;
90% Identity
iTF_00774946;
80% Identity
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