Hher002993.1
Basic Information
- Insect
- Heliconius hermathena
- Gene Symbol
- nfxl1
- Assembly
- GCA_013403705.1
- Location
- JAAIXJ010001839.1:119890-122364[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.1e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 3.1e-07 0.0031 17.6 15.9 3 19 186 202 185 202 0.95 4 19 5.3e-07 0.0054 16.9 13.8 3 18 239 254 237 255 0.91 5 19 1.7e-08 0.00017 21.7 10.6 1 19 290 308 290 308 0.98 6 19 3.7e-07 0.0038 17.4 18.8 3 19 345 361 337 361 0.85 7 19 1.2 1.3e+04 -3.4 0.4 7 11 365 369 365 369 0.84 8 19 6.7e-05 0.68 10.2 20.3 1 18 395 412 395 413 0.97 9 19 9.5e-09 9.6e-05 22.5 14.7 1 19 422 440 422 440 0.99 10 19 0.49 5e+03 -2.2 1.4 5 10 468 473 468 473 0.91 11 19 0.00073 7.4 6.9 4.9 9 19 488 498 486 498 0.89 12 19 0.025 2.5e+02 2.0 8.3 3 12 509 518 508 518 0.90 13 19 0.37 3.8e+03 -1.8 3.3 14 18 547 551 547 552 0.85 14 19 0.11 1.2e+03 -0.1 0.3 7 12 567 572 567 573 0.87 15 19 5.5e-06 0.055 13.7 4.6 1 11 588 598 588 599 0.97 16 19 2 2e+04 -4.9 1.3 9 11 615 617 613 618 0.61 17 19 4.6e-05 0.47 10.7 14.2 3 18 629 645 628 646 0.85 18 19 0.99 1e+04 -3.1 1.0 6 10 677 681 676 681 0.88 19 19 1.3e-06 0.014 15.6 10.4 1 16 687 701 687 707 0.91
Sequence Information
- Coding Sequence
- ATGGCTAGAAGATATCGTGATGCTGCTGCTAAATTGCAGCAAAACGTCCAGAAACATCTTCAGGTGATTAAAGATCTTTCTTCTTCTGAAGAAGATGAGCCAGTTGAGTCGAGTGTCCTGGATACTGTATTCCAGAGCTACTGGCGGGGTGGCGGGGATACACAAATGCTTAATAGGACTAAACATCTACTAGAAGAAGCAATAAGTGGCCGATCCGTGACCTGCTTGATTTGCATTGGATCTATCAAAAGAACCGACGCTATATGGACGTGCGatcattgttattgttatttccaTCTATCTTGCATACGGAAGTGGTCAAACGATAGTATAAGTCTACGCAGTGAAGAAACTCATGGCCCAATTGCTGTGTTCATgcctaaaaaaattgaatggtGTTGCCCAAAGTGTAGAAATTCATACAATAAAGAGGAAATACCACGTAAATATCGCTGTTTCTGCGGTAAAACTGATGACCCTCCTTTCCATCCTTGGTTAATTCCTCATACTTGTGGAGAAGTATGTGGGAAAAGGTTGTCAGCGGGTGATAATTGTAAGCATAAATGTCTTTTATTATGTCACCCTGGGCCTTGCCCACCGTGTCCTCAGACTGTTAATGGAGTTTGCTATTGTAACAAGGAGCACAAAAGAGTAAGATGTAGTGCTGCCCACTGGTCATGTAAACAACAGTGTAACAAGAACTTACCTTGTAAATCTCATAAGTGTGAGGGTATTTGTCATGCTGGAGAATGCCCACCATGTAATTATACAAGTCTGCAATCATGTCAATGTGgagtggaaaaaataaaacgccCATGTAATAATTTAGTGTGGCAATGTCaaaaacagtgtaataagcCATTTGCATGTGGGTTTCATAAATGTGACAGAGTATGCCATACTGGTAGCTGTGGACTATGtccaaattctggagtcataTCTTGTCCCTGCGGTGCTAACCAACGATACATCCAGTGTCCAGATACTATTGAAACTTGCCTTGGAACTTGTGGAAAGAAATATGATGACTGTCATCATACTTGTCCATCTAAATGTCATAAAGGACCATGCCCACCTTGTCAAGTGCAGATTGAAAAGAAATGTCATTGTTCAACTCATACAAGACCACTGCCCTGTAGCAAAGAGTTCAGATGTGAGACTAAATGTAGAGGTGTCAGACCTTGTGGCAAACATGGATGTGGAAGAAAATGTTGTAATGGGAACTGTCCTCCATGTGAGAAACTGTGTGATAAGACTCTACAATGCGGCCGCCATAAATGTGCTATGATTTGTCATCATGGACCATGCTATCCATGCCCTCTTGAATCTAAAGTTACTTGCCGCTGCAAAGAGACATACATAACAGTTCCTTGTGGAAGAGAGAGGCACACAAGACCACCTAAATGCAGTCAACCATGTAAACTAAAGTATAAATGTGGCCATAttgatgaaaataaacattcctGTCATTTTGGTGATTGTTCTCCATGCAAAGCAATTTGCAACAAGGCTTATAAGAAATGTGAACATAAATGTACAGCAACATGCCATGAATATGTACTGGTTACATTCAAACAAATTGAAAAGCCTGCTACACCATGGGAAGCTCAGCCGCCTAAATCAAAAATAGTTACGTTAGAATGTCCACCATGTGAAGCCCCTGTTACAGTGACATGTTTTGGAGAACATGAAGCAGATGAACAACCTTGTCACAAAGCTATTCGTCGACCATGCGGGAGAGCATGTGGTAAACCTCTGGCTTGTGGAAACCATTCATGTGAATTATTATGCCATTTATACAGCCAAGATGCCGACTATCCAAATGTGCCTTTTACATGTAAAGCTTGCCACAGAGAATGTTCTAAGATCCGTCCAGCCAAGTGTACTCACAAATGTGCTAAACAAGTTTGTCATCCTGGCCCGTGCCTACCTTGTGAGATCATGGAAAGAGTTTCTTGTCATTGTGGTGTAACAGAATTATATTTCCGCTGTAAAGAAGTAGCAAACACTAATGAGGTAACACTAAGTTGTAAACAAATATGTCCAAAGAATTTGGAATGTGGACATCGTTGCAAAAAAATCTGTCACTTTGGTCCATGTGGAGTAAACCAAATCTGTACTAAAAAGACTAAAATCCACTGCCCATGCGGTAATCTAAAAAGAGAGGCTCCATGTAATGCCGTCAGAAATGCAGAAATCAAAGTAGAATGTGATTCCAGCTGTGAAACAAAGAAAGTAGCTGCAAAATTAGAAAAAGAACAACAACAGATAAGATTAAAACAACTTGAGGAAGAGAAAAATCGCAAAGAACTAGAAGAATATGAGTGGAAATTAAGtggaaaaaagaagaaatataaagaaaagaaattgatTGTCAATAAAGATGACCGAAATACATTGCAGAAATACTGGGTTCCTATTTTATCGACAGCAGTTGTAATTTTGGCTGGTgtttactacattttttatatttag
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQVIKDLSSSEEDEPVESSVLDTVFQSYWRGGGDTQMLNRTKHLLEEAISGRSVTCLICIGSIKRTDAIWTCDHCYCYFHLSCIRKWSNDSISLRSEETHGPIAVFMPKKIEWCCPKCRNSYNKEEIPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSAGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCNKEHKRVRCSAAHWSCKQQCNKNLPCKSHKCEGICHAGECPPCNYTSLQSCQCGVEKIKRPCNNLVWQCQKQCNKPFACGFHKCDRVCHTGSCGLCPNSGVISCPCGANQRYIQCPDTIETCLGTCGKKYDDCHHTCPSKCHKGPCPPCQVQIEKKCHCSTHTRPLPCSKEFRCETKCRGVRPCGKHGCGRKCCNGNCPPCEKLCDKTLQCGRHKCAMICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTRPPKCSQPCKLKYKCGHIDENKHSCHFGDCSPCKAICNKAYKKCEHKCTATCHEYVLVTFKQIEKPATPWEAQPPKSKIVTLECPPCEAPVTVTCFGEHEADEQPCHKAIRRPCGRACGKPLACGNHSCELLCHLYSQDADYPNVPFTCKACHRECSKIRPAKCTHKCAKQVCHPGPCLPCEIMERVSCHCGVTELYFRCKEVANTNEVTLSCKQICPKNLECGHRCKKICHFGPCGVNQICTKKTKIHCPCGNLKREAPCNAVRNAEIKVECDSSCETKKVAAKLEKEQQQIRLKQLEEEKNRKELEEYEWKLSGKKKKYKEKKLIVNKDDRNTLQKYWVPILSTAVVILAGVYYIFYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00214100;
- 90% Identity
- iTF_00774946;
- 80% Identity
- -