Beup021519.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- nfxl1
- Assembly
- GCA_951802675.2
- Location
- OX637892.1:1032058-1034532[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.7e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 1.2e-07 0.002 18.9 14.4 3 19 186 202 185 202 0.95 4 19 0.26 4.2e+03 -1.3 1.4 6 10 227 231 226 232 0.84 5 19 3.3e-08 0.00053 20.8 12.5 3 18 239 254 237 255 0.91 6 19 0.88 1.4e+04 -3.0 1.6 6 10 280 284 279 284 0.89 7 19 1.5e-09 2.5e-05 25.0 12.6 1 19 290 308 290 308 0.99 8 19 7.9e-06 0.13 13.2 14.7 3 19 345 361 337 361 0.86 9 19 6.7e-05 1.1 10.2 20.3 1 18 395 412 395 413 0.97 10 19 2.3e-08 0.00038 21.2 16.9 1 19 422 440 422 440 0.99 11 19 0.0002 3.3 8.6 6.4 9 19 488 498 486 498 0.89 12 19 0.15 2.4e+03 -0.5 7.5 4 12 510 518 508 518 0.90 13 19 0.35 5.6e+03 -1.7 3.3 14 18 547 551 547 552 0.85 14 19 0.2 3.2e+03 -0.9 0.6 8 12 568 572 567 579 0.79 15 19 8.4e-06 0.13 13.1 5.3 1 11 588 598 588 599 0.98 16 19 0.8 1.3e+04 -2.8 1.3 15 18 613 616 612 617 0.84 17 19 0.00066 11 7.0 14.3 1 18 628 645 628 646 0.84 18 19 1.3 2.1e+04 -3.5 1.6 6 10 677 681 676 681 0.88 19 19 6.7e-07 0.011 16.6 10.7 1 16 687 701 687 707 0.91
Sequence Information
- Coding Sequence
- ATGGCCAGACGATATCGTGATGCTGCTGCTAAATTGCAGCAAAATGTCCAGAAACATCTACAAGTCATGAAAGATCTTTCGTCCTCTGAAGAAGATGAACCATTTGAGTCAAATGTCCTGGAGAGTGTGTTCCAGAGCTATTGGAGAGGGGGCGGTGACAAGCATATGCTTAATAGGACCAAGAATCTTCTGGAGGAAGCGATAAGCGGTCGCTCTGTCACTTGCTTGATTTGCATTGGTTCCATTAAAAGAGCTGATGCTATATGGACTTGCGACCATTGCTTTTCTTATTTCCATCTTTCTTGCATACAGAAGTGGTCTAATGACAGTATTAGCTTGCGTAACGAAGAAAATCAAGGCCCAATTGCGGTGGTTTTACCCAAGAAGATAGAGTGGTGCTGTCCTAAATGTAGACATTCATACAATAAAGAAGAAATACCACGCAAATATCGATGTTTTTGTGGAAAAACTGATGACCCTCCTTACCATCCCTGGTTAATACCTCATACATGTGGGGAAGTGTGTGGTAAAAGATTATCTACAGGTGATAATTGTATGCATAAATGTCTTTTATTATGTCATCCGGGACCTTGTCCACCATGTCCACAAACTGTGAATGGAGCTTGCTTCTGTAACAAGGAACGCAAGAGAGTTAGATGTAGTGCTGCCCAATGGTCATGTCAACAACCATGTACTAAAAGTTTGCCCTGTAGATCtcataaatgtgaaaatatttgCCATGCAGGAGAGTGTCCTCCTTGTAATTATACAAGCTTACAGTTTTGTCAATGTCAAGCAGAGAAAACTAAGCGTCCTTGCAACAATTTGGTATGGCAAtgccaaaaaatatgtaataaaccattcGCATGTGGTTATCATAAATGTGAGAAAATTTGTCATGCTGGAAGCTGTGGAACATGTCCAAATTCTGGCATCCGGTCATGCCCTTGTGGAGCTAATCAACGTTATATTCAATGTCCAGATGTTATAGAAACATGTCTCGGTACTTGTGGAAAGAAATATGAAGATTGTGAACACAATTGCCCAGCTAAATGTCACATGGGATCATGTCCACCTTGCCAAGTGCAGATTGAAAAGAAATGTCAATGCTTAACTCATACTAAGTCATTGCCTTGCAGCAAGGAGTTTAAATGTGATACAAAATGTAGAGGAATCAGACCATGTGGAAAACATGGCTGTGGGCGAAAATGTTGTAACGGTAACTGCCCCCCTTGTGAAAAGGTGTGTGATAAATCATTACAATGTGGTCGTCACAAATGTACAACAATTTGTCATCATGGACCTTGCTATCCGTGTCCTCTGGAGTCTAAAGTAACTTGTCGTTGTAAAGAGACATATGTGCGAGTTCCGTGTGGAAGAGAAAGACACACTCGCCCACCTAAATGTAATCTGccatgtaaaattaaatataaatgtggacatatagaagaaaataaacattCATGCCACTTTGGTGATTGCCCACCATGCAAAGCTATTTGTAACAAGAAGTACCAAAAATGTGACCATCAGTGTACAGTAACTTGCCATGAATATGTGCTTGTTACATTTAAACAGGTTGAAAAACCTGCTACTCCATGGGAAGCTCAGCCGCCAAAGTCTAAAATAGTTGCCCTGGAATGCCCACCTTGTAATACTCCTGTAACGGTCACATGTTTTGGTGAACATGAGACAGATAGTGAACCGTGCCACAAAGCAAGTCGAAAACCTTGTGGACGGGCATGTGGAAAACCATTATCCTGCGGAAATCACTTATGTGAACAATTATGTCACTTGTATAACTCTGACCCCGAGTACCCAAATGTGCCTTACACATGCAAGCCATGCAACAGAGAGTGTTCAAAAGTCCGTCCAGAGGAATGCTCACACAAATGTGCAAAACGAGGCTGTCATCCTGGCATGTGTCCACCTTGTGATATAATGGAGAGAGTGTCATGTCATTGTGGTGTCACAGAACTATACTTTCGCTGTCGTGAACTATCAAGTACCAATGAAGAAACACTAAGTTGTAAACAAACATGTCCAAAGAATCTTGAGTGTGGACATAGGTGTAGAAATATATGTCATTCAGGACCATGTGGAGTAAATCAAATCTGTACTAGAAAGACTAAAATTCATTGCCCCTGTGGAAATTTGAAAAAAGATGCTCCCTGCAATGCTGTTAGAAACGCTGAAGTCAGTGTAGAATGTGACTCAAGTTGTGAATTTAAAAAACAGGCTGCAAAGTTAGAAAAAGAACAACAAGAGAAGAGATTAAAGCAGTTAGAAGAAGAGAGAAATCGTAAAGAGTTAGAAGAGTATGAATGGAAGTTAAGtggaaagaaaaagaaatacaaaGAGAAGAAAGTTATAGTGAATAAACATGATAGAAGTCTAATGCAAAAATATTGGGTTCCTATTTTATCCACAGCAGTTCTAATTATAGCTGGTGTTTACTACATTTTGtatatctaa
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQVMKDLSSSEEDEPFESNVLESVFQSYWRGGGDKHMLNRTKNLLEEAISGRSVTCLICIGSIKRADAIWTCDHCFSYFHLSCIQKWSNDSISLRNEENQGPIAVVLPKKIEWCCPKCRHSYNKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSTGDNCMHKCLLLCHPGPCPPCPQTVNGACFCNKERKRVRCSAAQWSCQQPCTKSLPCRSHKCENICHAGECPPCNYTSLQFCQCQAEKTKRPCNNLVWQCQKICNKPFACGYHKCEKICHAGSCGTCPNSGIRSCPCGANQRYIQCPDVIETCLGTCGKKYEDCEHNCPAKCHMGSCPPCQVQIEKKCQCLTHTKSLPCSKEFKCDTKCRGIRPCGKHGCGRKCCNGNCPPCEKVCDKSLQCGRHKCTTICHHGPCYPCPLESKVTCRCKETYVRVPCGRERHTRPPKCNLPCKIKYKCGHIEENKHSCHFGDCPPCKAICNKKYQKCDHQCTVTCHEYVLVTFKQVEKPATPWEAQPPKSKIVALECPPCNTPVTVTCFGEHETDSEPCHKASRKPCGRACGKPLSCGNHLCEQLCHLYNSDPEYPNVPYTCKPCNRECSKVRPEECSHKCAKRGCHPGMCPPCDIMERVSCHCGVTELYFRCRELSSTNEETLSCKQTCPKNLECGHRCRNICHSGPCGVNQICTRKTKIHCPCGNLKKDAPCNAVRNAEVSVECDSSCEFKKQAAKLEKEQQEKRLKQLEEERNRKELEEYEWKLSGKKKKYKEKKVIVNKHDRSLMQKYWVPILSTAVLIIAGVYYILYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00214100;
- 90% Identity
- iTF_00160353;
- 80% Identity
- -