Lcam019074.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- nfxl1
- Assembly
- GCA_905147385.1
- Location
- LR990231.1:864353-866836[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 17 0.011 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 17 3.1e-07 0.0046 17.6 15.9 3 19 186 202 185 202 0.95 4 17 2 3e+04 -5.0 2.1 6 10 227 231 226 231 0.81 5 17 2.7e-08 0.0004 21.0 13.2 1 18 237 254 237 255 0.91 6 17 1.1e-08 0.00016 22.3 12.5 1 19 290 308 290 308 0.99 7 17 5.3e-06 0.078 13.7 19.1 3 19 345 361 337 361 0.88 8 17 6.7e-05 0.99 10.2 20.3 1 18 395 412 395 413 0.97 9 17 1.4e-08 0.00021 21.9 17.3 1 19 422 440 422 440 0.99 10 17 0.4 6e+03 -1.9 0.9 5 10 468 473 468 473 0.93 11 17 0.00021 3 8.6 6.4 9 19 488 498 486 498 0.89 12 17 0.0012 18 6.2 9.0 1 12 512 522 508 522 0.96 13 17 0.31 4.6e+03 -1.5 3.5 14 18 551 555 551 556 0.87 14 17 0.11 1.6e+03 -0.1 0.7 7 12 571 576 571 583 0.82 15 17 5.5e-06 0.081 13.7 4.6 1 11 592 602 592 603 0.97 16 17 4.8e-05 0.7 10.7 15.6 3 18 633 649 632 650 0.83 17 17 7.9e-07 0.012 16.4 10.6 1 16 691 705 691 711 0.91
Sequence Information
- Coding Sequence
- ATGGCGCGGCGATACCGCGACGCCGCTGCTAAACTGCAGCAAAATGTTCAGAAACATCTTCAAGTCATGAAAGATGTTTCTTCCTCTGATGACGACGAGCCGTTCGATTCAAATGTCTTGGAAGGCGTGTTCCAGAGTTATCAAAGAGGTGGCGGAGATACTCAACTGCTAAACAGAACTAAGAATCTTCTGGAAGAAGCAATCAGTGGCCGGTCGGTAACCTGCCTCATTTGTATCGCATCCATCAAACGAGCCGATCCCATCTGGACGTGCGACCATTGTTATTCTTACTTTCATATTTCCTGTATACAAAAGTGGTCCAATGATAGCATTAGCTTACGTAGCGAGGAACCAAATGCCCCGATTGCTGTAATTAGACCCAAAAAGATTGAATGGTGCTGCCCAAAATGCAGACAATCATACAGCAAAGAAGAAATACCTAGGAAGTATCGTTGCTTTTGTGGAAAAACTGATGATCCACCTTATCATCCCTGGTTAATACCGCACACTTGTGGAGAAGTGTGTGGAAAGAGATTGTCAACTGGTGATAGTTGTAAACATAAATGTCTTTTATTATGTCACCCTGGACCTTGCCCGCCTTGTCCACAAACTGTTAATGGAATTTGCTATTGTGGGAAAGAGCAGAAAAGAGTAAGATGCAGTGCAGCCAAATGGTCATGTCAACAACAATGCAAGAAGAGGTTACCATGTCAGTCCCACAAGTGTGAGGACATTTGTCATGATGGTGAATGTCCTCCTTGCAATTACACGAGCTTGCAGCCCTGTCAGTGTGGTGCAGATAAATCAAAGCGTCCATGTAATGATCTAGTGTGGCAATGTAAAAGGCAGTGTAATAAACCATTTGCTTGTGGTTTTCATAAATGTGAAAAGATTTGTCACACGGGAACCTGTGGAACATGTCCAAATTCTGGTGTTAGATCATGTCCTTGTGGAGCAAATCAACGATATATCCAGTGTCCAGATGTCATTGAAACATGTCTTGGTACTTGTGGCAAAAAACATGAGGATTGTGACCACAACTGCCCAGCTAAATGTCACAAAGGGCCTTGTCCTCCTTGCCAGATATTAATTGAAAAAAAATGCCAATGTTCAACTCATACAAGATCACTCCCATGTAGTAAGGAGTTCAGATGTGACACCAAATGTAGAGGCACCAGGCTATGTGGTAAGCATGGATGTGGAAGAAAATGCTGTAATGGAAACTGTCCTCCCTGTGAGAAAGTTTGTGACAAGCCTCTGCAATGTGGCCGTCACAAGTGTACTACTGTATGTCATCATGGACCCTGCTACCCTTGTCCTCTGGAATCTAAAGTAACTTGCCGTTGTAAGGAGACATATGTAATGGTTCCGTGTGGTAGAGAAAGACATACTCGTCCCCCTAGATGCAATCAGTTGTGCAAAATAAAATACAAATGTGGTCATGTTGAGGAAAACAAACATTCATGTCATTTTGGTGATTGTCCTCCCTGCAAAGCTATTTGTAATAAGACTTATCAAAAGTGTGGGCACAAGTGTGGGCACAAGTGTAAGGCAAAATGTCATGACTATGTCTTGGTAACATTTAAGCAGATAGAAAAGCCTGCAACACCATGGGAAGCCCAACCTCCCAAATTAAAAGTAGTTGCATTAGATTGTCCACCTTGTGAAGCTCCAGTTCAGATCACATGTTTTGGAGAACATGAAATTGATGAACAACCTTGTCATAAATCATCTCGAAGGCCTTGTGGGCGTGAATGTGGAAAACCTCTGGAATGTGGAAATCATTCATGTGAACTGTTATGTCATTTGTATACCAAAGATCCCGATTACCCAAATGTGCCTTTTACTTGTAAACAATGCAACAGGGAATGTTTGAACATCCGTCCAAATATGTGCACTCACAAATGTGCAAAACGAGCTTGCCACCCTGGCCCATGTCCGCCTTGCGAAATACTGGAGAGGGTATCCTGTCATTGTGGATTAACAGAATTGTATTTTCGCTGTCGAGAGCTAACAAATATAAGTGAAGAAAAGCTTAATTGCAAACAACAATGTTCAAAGAATTTGGATTGTGGACATAGATGTAGAAATATCTGCCATTCTGGGCCATGTGGATTAAATCAAATTTGCACAAAGAAAACCAAAGTTTACTGTCCATGTAATAATCTAAAGAAGGAGGCTCCATGCAATGAAGTACGTAATGGAATGAAAATAATATGTGACACTAGCTGTGAAGCTAAAAAATTAGCAGCGAAAATAGAGAAAGAAAAAGAAGAAAAGAGATTAAAAGAGTTGGAAGATGAGAAAAATCGTAAAGAATTGGAAGAGTATGAATGGAAGTTAAGTGGAAAGAAAAAAAAGTATAAGGAGAAGAAAGTGGTTGTCACTAGAGATGAGCGGAATGTGTTGCAAAAATATTGGGTTCCTATTTTGTCAGTAGTGGTAGTTATTATAGCTGGTGTTTATTTTATTTTGTATAATTGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQVMKDVSSSDDDEPFDSNVLEGVFQSYQRGGGDTQLLNRTKNLLEEAISGRSVTCLICIASIKRADPIWTCDHCYSYFHISCIQKWSNDSISLRSEEPNAPIAVIRPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNGICYCGKEQKRVRCSAAKWSCQQQCKKRLPCQSHKCEDICHDGECPPCNYTSLQPCQCGADKSKRPCNDLVWQCKRQCNKPFACGFHKCEKICHTGTCGTCPNSGVRSCPCGANQRYIQCPDVIETCLGTCGKKHEDCDHNCPAKCHKGPCPPCQILIEKKCQCSTHTRSLPCSKEFRCDTKCRGTRLCGKHGCGRKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETYVMVPCGRERHTRPPRCNQLCKIKYKCGHVEENKHSCHFGDCPPCKAICNKTYQKCGHKCGHKCKAKCHDYVLVTFKQIEKPATPWEAQPPKLKVVALDCPPCEAPVQITCFGEHEIDEQPCHKSSRRPCGRECGKPLECGNHSCELLCHLYTKDPDYPNVPFTCKQCNRECLNIRPNMCTHKCAKRACHPGPCPPCEILERVSCHCGLTELYFRCRELTNISEEKLNCKQQCSKNLDCGHRCRNICHSGPCGLNQICTKKTKVYCPCNNLKKEAPCNEVRNGMKIICDTSCEAKKLAAKIEKEKEEKRLKELEDEKNRKELEEYEWKLSGKKKKYKEKKVVVTRDERNVLQKYWVPILSVVVVIIAGVYFILYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00214100;
- 90% Identity
- -
- 80% Identity
- -