Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: Rreb1
Assembly: GCA_963991005.1
Location: OZ022556.1:7044644-7049539[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.1e-06 0.00037 22.1 1.3 1 23 57 79 57 79 0.99

2 16 0.00022 0.019 16.7 1.2 1 23 92 114 92 114 0.98

3 16 2.3e-05 0.002 19.8 4.1 1 23 120 142 120 142 0.98

4 16 0.74 66 5.6 0.3 1 23 204 228 204 228 0.89

5 16 0.56 50 6.0 2.7 2 23 234 256 234 256 0.94

6 16 0.049 4.4 9.3 1.3 1 21 302 322 302 323 0.94

7 16 0.13 12 8.0 0.1 1 23 454 476 454 476 0.96

8 16 2.7e-05 0.0024 19.6 0.8 1 23 485 507 485 507 0.99

9 16 0.0026 0.23 13.3 2.3 1 23 513 536 513 536 0.97

10 16 0.00089 0.08 14.8 3.0 1 23 939 962 939 962 0.97

11 16 0.00089 0.08 14.8 0.4 2 23 1177 1198 1176 1198 0.97

12 16 0.23 20 7.2 6.3 1 23 1204 1227 1204 1227 0.97

13 16 0.077 6.8 8.7 1.1 1 20 1257 1277 1257 1278 0.94

14 16 0.39 34 6.5 2.8 1 23 1344 1367 1344 1367 0.96

15 16 0.023 2 10.3 0.2 3 23 1414 1434 1412 1434 0.94

16 16 0.014 1.2 11.0 5.9 1 23 1440 1462 1440 1462 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.1e-06	0.00037	22.1	1.3	1	23	57	79	57	79	0.99
2	16	0.00022	0.019	16.7	1.2	1	23	92	114	92	114	0.98
3	16	2.3e-05	0.002	19.8	4.1	1	23	120	142	120	142	0.98
4	16	0.74	66	5.6	0.3	1	23	204	228	204	228	0.89
5	16	0.56	50	6.0	2.7	2	23	234	256	234	256	0.94
6	16	0.049	4.4	9.3	1.3	1	21	302	322	302	323	0.94
7	16	0.13	12	8.0	0.1	1	23	454	476	454	476	0.96
8	16	2.7e-05	0.0024	19.6	0.8	1	23	485	507	485	507	0.99
9	16	0.0026	0.23	13.3	2.3	1	23	513	536	513	536	0.97
10	16	0.00089	0.08	14.8	3.0	1	23	939	962	939	962	0.97
11	16	0.00089	0.08	14.8	0.4	2	23	1177	1198	1176	1198	0.97
12	16	0.23	20	7.2	6.3	1	23	1204	1227	1204	1227	0.97
13	16	0.077	6.8	8.7	1.1	1	20	1257	1277	1257	1278	0.94
14	16	0.39	34	6.5	2.8	1	23	1344	1367	1344	1367	0.96
15	16	0.023	2	10.3	0.2	3	23	1414	1434	1412	1434	0.94
16	16	0.014	1.2	11.0	5.9	1	23	1440	1462	1440	1462	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCTCTCGAATCCAACCACATAACCAAAGAAGCATTAGTCAACCAAACCAGTCGAAGTGATTCGGGTATTTTTTCCGCCACCGCCAACACGACCATCGATCAGTCCTCCGCTACTTGCGACAGCGACAACCGAAGCGACTGCAGTTCCCCCGAACGCAAGTACGTCTGTCCGATCTGCGATAAGATGCTGACGTCCCAACACAACTTTACTTTGCACATACGATCTCATAACAACGAAAGCGAAGTCATAGACAACGAGAAGGGCTTCACTTGTCGAATCTGCCATAAAGTGCTGAGCTCCAGCTCGAGTTTAGATCGTCACGTGTTGGTGCATAGCGGCGAACGACCCTTCAACTGCAAATATTGCGGTGATACTTTCACGACGAACGGAAATATGCACCGGCATATGAGAACTCACTCGAATAAAGGAGAGAACTATGAGTCTGACGGAAGTACTGATAGTGGCAGTGCGAGAAGCATCGAATACAACAATAATAAAGTCGATTCCAAACATTCCAATAAGAGAAAACTTGACAATGTCGATGAGAGCAGTAATAAGAAACGCAACATGTCCAAAGACAACGAGGACGAGGTGCAAACTTTCAAATGCCCAGTATGTAATCGATACGACTTCAATTCTATCGAAAATCTCGATACTCACTTGGAAGACAATCATCCAGAGTATCCTGCTAAATGTAGCCACTGCAACCAAATATTCCTCAATAATAAATTGCTCACAATCCACAAAGACCGAGAACATGAACCCAACACCCCTAAACAATCAGTAATTGGCTTTAAAGACCTCACCTTTGTAGATTTCTCTAGCGAGAAGTTTCCTCACATTGCCAGACATGAGTGCGAAATGAATTTGCATAAGGTTGCGGGAGGGCTTAAATTCCAATGCCAGAAATGTTCCAAAGCGTTTCCATGCTCCAGTTCCTTGGAAATTCACGAGAAAAGCTGCCTAGAGCCACCGACTGGCTTAAATTTAAGCAAAACTAACAACATATCAGAAGATGAAATAAGGCGAGCCGATTTCTTCTCGAGATTAAATCTCCAAGATAACTCGCCTGATAAAAAGGATTCCATATCCAAACCCTTAAAAGAAACTCCTACTAAGCTTAGAGAACAGCTGGCTAAAGTCATGGATAATACCAAAGATTTGGCTGATATTCAGTCAATTTTATCGAACATTAATATGCAACAACTGCAATCGAAACACAACGAACTCAAAATATCTCCATCCAAACCGGTCATCGAAATTGGCAACGATTCGTCGAAAAATGAACAAGAAGAAGAATCTCAAGACTCATTTGCAATAGAATTTCGAAAGATGAAACTTCGCGGCGAATTTCCTTGTCGATTGTGCACTGCAGTATTTCCAAATTTGCGAGCACTGAAAGGCCATAACAGAGCTCATCTAAACGGAAATAACAATGGCACTTATTACTGCAACATGTGCCCTCACTCGTCTATCGATAAAGCCGCTCTTATTCGACATATGAGGACGCACAATGGCGATCGTCCGTATGAATGTGCCCTTTGCAACTATGCTTTCACAACTAAAGCGAATTGTGAAAGGCACTTGCGAAATCGCCATTCGAAAACCACGAGAGATGAGGTGAAGAAGTCCATCATCTATCATCCTTCTGAAGATCCTACTAATGACGAACTTAACAAATTGACTGTTAAAGATGATAACAAAAAGTATAGCCTTAACTCCTCTGTAGAGTCTAACGATTTGAGTCCAGAGAAAGTTCACTGTTCCACGCCAAAGATACCCACAATTAATCCGCCTACCCTAATTCCAGAGCTGCAAGCTTTAAAACCTACGAAAATGTTTCCCAACATCGATTTTCTTCGTAATGAAAATCTAAACGCCCTGAAAGAAAACCGATTCTTAAATGGGGTTCCCCCATTCTTCCCTCAGCCCTTCAATCTTACCTCAAACCCACCTATCATTCCAGCTACGATTCCAGAACCTGAAAATATTGCCTCAAAAATACAAGTCAAACCATTTGAGGCTCTCAAAGAGAATATTAACTCTTTTGATGATCATTCCGAGGATGAATACTATGACGAGGAGGAAGATGAGCAGCCACCTATGGAAGTGGCACTTGATTTAAGCAAGAAAAAGATGGATGAAGATAAGAAGCGATTAGAGGAAGAAGGACCTCAAGATCTATCAAAGAAATTTCCTACTTCTTCTGTTATTCCGAGAACGGTTCCTAATGTTAGCGAATTATTTGCTCAACAACTGCTGAAATCGCAGCCAAAAATTGACCCAGCCGCGCTGTATGCAACACAGTTAGCAAACATGTACCGAAATGGATTTGGAGGGTGGCCAGGTTTCCCTGTCAACCCCTTGCTGTTCCAGGCGTTGCCAACACTACCCCGTACCCCTCAAGATCTCAAAGAAAGAATGCAACGGTTTCAACTTTGCGGTGGCTCGTTAATTACTGAAGAGTTAaagaattttcaaaatttacagCAGCAACAAAATAACCAGCAGCCACTCCTGAGCCCTGTTTCTGGTTTTAATGGATTCAAGCCAAACTCGGAGATTAAACCATCTGTGGTAAGAGAAAATAGTTTTTCACATCATTCTCCAAAGAAATCCGAGGAGGAGAAACCGCTTAGTGTTAAGATCGATAGCAACTATACTGACGCTTCTCCAAAAATGCATAGTCCAGCTCAGCAGTTGAAGTCTGATCTTATGCAATCTCCTAATTCAATAAAGATGGTAATAAAAAATGGTGTTTTAATGCCGAAACAAAAGCAAAGGAGATATAGAACGGAGAGGCCTTTTACCTGTGAACACTGCTCTGCTAGATTCACTCTTCGTTCTAACATGGAAAGACATATCAAGCAACAACATCCTCAATACTGGTCCCAACGTCAAAGAGGTAGTGTTGGGCAGCCCGGTAGGAAACCTCAGGGATTGTTACTTAAACCGAGCTATTGTGATCTGACAATTCCCAACTACGAACTACCAAAGATGCCTGATTATGACGAGTCCAAAGAGCATATTCACGAGAAACTTAAGTTTGCTCTCTTAGCTCAACAATACAGAGCCAGTCAATACAACCAAGAGATTAAAAGGGAAGACGATGAGGAGGACTGTGATTTGGTCATTGACGAGAACGAAAACAAGACTGAAGAACCTACTAACCAAAAAATCGAGTACCAAAGAACCCAAATTCTAGAACAGAAACTGAGAGAGCTCCAAGATAAAGTTATAAACGAAAGAGGTGTGAAATCCGAGGACGATCTGGTCCCAGTATCGAGACTTCTAGATAATGCCTCTCAACAGCAgtttaaagaatttttcaagAGGGAAGGTGATGACCACGAACTTGGTGTTGGCAGTGAGGAAGATGAGGAAGGTCTAGTAGCAAGCGGCAGTACTAGCGAAGGAAATATTTCTGGAACAGATGAAAATAGATCCGAATCAGAAGCGGTTCCCAACGCAGCCCCCGCAAAGAAGAAATCCGCCTACTCACTAGCTCCTAACCGTGTAAGCTGTCCGTACTGCAGCCGTAAATTTCCATGGACATCATCGTTGCGCCGCCATATTCTCACTCATACCGGCCAGAAACCTTTCAAATGTAGTCACTGTCCTCTTCTATTCACCACCAAATCAAATTGCGATCGTCACCTTCTACGCAAGCACGGCAACTCTGCTACTACTATTGTCACCAGCGAAGCCTCGACTAATAACAGCATGAATTATTTAATGCGAAATGTTCCCGAGCGGCCCTTCAAATGCTCCAGCTGTCCCAGCAGCACCTTCTCCACTTactcaaatttaaaaaagcataTCAGTTGCAAACATTCTACGAATGCTCAAGGGGACGATATCAAAGCTCAGGGTTATGAAGCAGGAAGCTCCGAGGACGAAAAAGTGATCCAACCCGAGACTAAGAATGACTGGGAAAGTCAAATTGCTTACAGCAAGTTCCCTGTGTCCAATAACCTCGAGGGGCATGCAAGCGCCCAAATTCCCAACTCGGATCTCCCATTTAAATGCCATTTATGCGAGAGCTCGTTCGCCGAGAGACATCAAGCTTTGGACCACATCAGAGATAAACATGCTTCCGAGTACGACCTGTTGATGTCGAAAAACGCTTTGGACGCTAATGCTACCACGCCGGATGAGGCGCCCAATCACGATGAAGAAGACACCGATATTCGCGGCAAATTTCCGGATTACTCCAACAGGAAGGTGATTTGTGCTTGGTGCATGCGTAGATTTTGGTCGGCGGAAGATCTGCGACGTCACATGCGCACTCACACTGGCGAGCGTCCCTTCAGTTGCGATATCTGCAGACGTAGATTCACTTTGAAACACAGCATGTTACGTCACCGGAAGAAGCATGCGATCAGCAGCAGCTTTGAAAATGACACCACGCATAGTGATGAAGATATTCCCGATGAGAAAAAGAGTTCTTCCTCTAAAGAGGAAGATAAAACAGAGGAATCGGATGCACAAGAAGGTGGCGGAGATTTGATAAGTAATCTTTTAGGTTTAAGAGATAGATCGATTATTGATAAGGTGCTTGATGCTACGGCTGATGACGCAGCGAAATTATTGGGCGTCAGAAATGGGGCTAAGGAATAA
Protein Sequence: MEESLESNHITKEALVNQTSRSDSGIFSATANTTIDQSSATCDSDNRSDCSSPERKYVCPICDKMLTSQHNFTLHIRSHNNESEVIDNEKGFTCRICHKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHSNKGENYESDGSTDSGSARSIEYNNNKVDSKHSNKRKLDNVDESSNKKRNMSKDNEDEVQTFKCPVCNRYDFNSIENLDTHLEDNHPEYPAKCSHCNQIFLNNKLLTIHKDREHEPNTPKQSVIGFKDLTFVDFSSEKFPHIARHECEMNLHKVAGGLKFQCQKCSKAFPCSSSLEIHEKSCLEPPTGLNLSKTNNISEDEIRRADFFSRLNLQDNSPDKKDSISKPLKETPTKLREQLAKVMDNTKDLADIQSILSNINMQQLQSKHNELKISPSKPVIEIGNDSSKNEQEEESQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTRDEVKKSIIYHPSEDPTNDELNKLTVKDDNKKYSLNSSVESNDLSPEKVHCSTPKIPTINPPTLIPELQALKPTKMFPNIDFLRNENLNALKENRFLNGVPPFFPQPFNLTSNPPIIPATIPEPENIASKIQVKPFEALKENINSFDDHSEDEYYDEEEDEQPPMEVALDLSKKKMDEDKKRLEEEGPQDLSKKFPTSSVIPRTVPNVSELFAQQLLKSQPKIDPAALYATQLANMYRNGFGGWPGFPVNPLLFQALPTLPRTPQDLKERMQRFQLCGGSLITEELKNFQNLQQQQNNQQPLLSPVSGFNGFKPNSEIKPSVVRENSFSHHSPKKSEEEKPLSVKIDSNYTDASPKMHSPAQQLKSDLMQSPNSIKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRQRGSVGQPGRKPQGLLLKPSYCDLTIPNYELPKMPDYDESKEHIHEKLKFALLAQQYRASQYNQEIKREDDEEDCDLVIDENENKTEEPTNQKIEYQRTQILEQKLRELQDKVINERGVKSEDDLVPVSRLLDNASQQQFKEFFKREGDDHELGVGSEEDEEGLVASGSTSEGNISGTDENRSESEAVPNAAPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTSEASTNNSMNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVIQPETKNDWESQIAYSKFPVSNNLEGHASAQIPNSDLPFKCHLCESSFAERHQALDHIRDKHASEYDLLMSKNALDANATTPDEAPNHDEEDTDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHAISSSFENDTTHSDEDIPDEKKSSSSKEEDKTEESDAQEGGGDLISNLLGLRDRSIIDKVLDATADDAAKLLGVRNGAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01241152; iTF_01239432; iTF_01244482; iTF_00444433; iTF_00849011; iTF_01188637;
90% Identity: iTF_01239432; iTF_01241152;
80% Identity: -