Basic Information

Insect: Polydrusus cervinus
Gene Symbol: Rreb1
Assembly: GCA_935413225.1
Location: CAKXYS010000926.1:516310-521202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.5e-06 0.00036 22.1 1.3 1 23 57 79 57 79 0.99

2 16 0.00018 0.019 16.7 1.2 1 23 92 114 92 114 0.98

3 16 1.9e-05 0.002 19.8 4.1 1 23 120 142 120 142 0.98

4 16 0.11 11 8.0 0.3 1 23 204 228 204 228 0.92

5 16 0.34 35 6.4 2.7 2 23 234 256 234 256 0.95

6 16 0.027 2.8 9.9 1.6 1 21 302 322 302 323 0.94

7 16 0.11 11 7.9 0.1 1 23 454 476 454 476 0.96

8 16 2.3e-05 0.0023 19.5 0.8 1 23 485 507 485 507 0.99

9 16 0.0022 0.22 13.3 2.3 1 23 513 536 513 536 0.97

10 16 0.00076 0.078 14.7 3.0 1 23 951 974 951 974 0.97

11 16 0.00029 0.03 16.1 0.4 2 23 1189 1210 1188 1210 0.97

12 16 0.19 20 7.2 6.3 1 23 1216 1239 1216 1239 0.97

13 16 0.065 6.7 8.7 1.1 1 20 1269 1289 1269 1290 0.94

14 16 0.33 34 6.5 2.8 1 23 1357 1380 1357 1380 0.96

15 16 0.019 2 10.3 0.2 3 23 1427 1447 1425 1447 0.94

16 16 0.012 1.2 11.0 5.9 1 23 1453 1475 1453 1475 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.5e-06	0.00036	22.1	1.3	1	23	57	79	57	79	0.99
2	16	0.00018	0.019	16.7	1.2	1	23	92	114	92	114	0.98
3	16	1.9e-05	0.002	19.8	4.1	1	23	120	142	120	142	0.98
4	16	0.11	11	8.0	0.3	1	23	204	228	204	228	0.92
5	16	0.34	35	6.4	2.7	2	23	234	256	234	256	0.95
6	16	0.027	2.8	9.9	1.6	1	21	302	322	302	323	0.94
7	16	0.11	11	7.9	0.1	1	23	454	476	454	476	0.96
8	16	2.3e-05	0.0023	19.5	0.8	1	23	485	507	485	507	0.99
9	16	0.0022	0.22	13.3	2.3	1	23	513	536	513	536	0.97
10	16	0.00076	0.078	14.7	3.0	1	23	951	974	951	974	0.97
11	16	0.00029	0.03	16.1	0.4	2	23	1189	1210	1188	1210	0.97
12	16	0.19	20	7.2	6.3	1	23	1216	1239	1216	1239	0.97
13	16	0.065	6.7	8.7	1.1	1	20	1269	1289	1269	1290	0.94
14	16	0.33	34	6.5	2.8	1	23	1357	1380	1357	1380	0.96
15	16	0.019	2	10.3	0.2	3	23	1427	1447	1425	1447	0.94
16	16	0.012	1.2	11.0	5.9	1	23	1453	1475	1453	1475	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCCTTGGAATCCACCCACACAACCAAAGAATCATTAGTCAACCAAAGTAGCCGCGGTGACTCGGGTATTTTTTCCGCTACCGCCAATACAACCATCGATCAGTCATCAGCAACTTGTGATAGTGACAACCGAAGTGACTGCAGTTCCCCCGAACGCAAATACGTCTGTCCGATCTGCGATAAAATGCTGACGTCCCAACACAACTTTACATTGCACATCCGATCTCATAACAACGAAAGCGAAGTCGTGGACAACGAAAAGGGATTTACGTGTAGAATCTGCCATAAGGTGCTCAGCTCAAGTTCTAGTTTAGATCGGCACGTGTTGGTGCATAGTGGTGAGCGGCCATTTAACTGCAAGTACTGTGGTGATACTTTCACTACGAATGGTAATATGCATCGGCATATGAGAACTCACTCGAATAAAGGAGAGAACTACGAGTCTGATGGAAGTACCGATAGTGGCAGTGCGAGAAGCATcgaatataacaataataaagtcGATTCCAAGCATACCCATAAAAGAAAACTTGAAACTGTCGAAGAGAGCAATAATAAGAAACGcaacatttctaaaacaagcgACGAAGATGTTCAAACCTTTAAGTGTCCTGTATGTAATCGATACGACTTTAATTCCGTAGAAAATCTCGAGACTCACTTAGAAGACAACCATCCAGAGTATCCTGCTAAATGTAGCCACTGCAACCAAATATTCCTCAATAACAAATTGCTCACTATCCACAAGGAAAGGGAGCATGAGCCCAACACTGCTAAGCAATCAATAGTTGGATTCAAAGACCTTACCTTCGTCGATTTTTCTAGTGAGAAGTTTCCTTACATTGCCAGACATGAGTGCGAGATAAATGTACATAAAGCTGCGGGAGGGCTAAAATTCCAATGCAAGAAATGCTCCAAAGCCTTTCCATGCTCAAGTTCCTTGGAGATTCACGAGAAGAGCTGCCTTGAACCACCTACTGGCTTAAATTTAAGCAAAACTAACAACGTTTCAGAAGATGAAATCAGGCGAGCAGATTTCTTCTCGAGATTAAATCTCCAAGATAACTCACCTGAGAAAAAGGTTCCAACAACTAGACTCTTGAAAGAAACTCCTACTAAATTAAAAGAACAGCTGGCTAAAGTCATGGATAATACCAAAGATTTGGCTGATATTCAGTCGATTTTATCTAACATTAATATGCAACAACTGCAATCGAAACACAACGAACTTAAAATATCACCATCCAAACCAGTCATCGAAGTTGGCAACGACTCATCGAAGAATGAACAAGAAGAAGAATCTCAGGACTCATTTGCAATTGAGTTTCGGAAAATGAAGCTTCGCGGCGAGTTCCCTTGTCGATTGTGCACTGCAGTGTTTCCAAACTTACGAGCACTCAAAGGCCATAACAGAGCTCATTTAAACGGAAATAACAATGGTACTTATTACTGTAACATGTGTCCTCACTCGTCCATTGACAAAGCTGCtcttattcgacacatgagaacCCACAATGGAGATCGTCCTTATGAATGTGCACTTTGTAATTATGCTTTCACAACTAAGGCTAATTGCGAGAGGCATTTGCGAAATCGTCATTCAAAAACCACCAGAGAAGACGTTAAGAAATCTATTATCTATCATCCTTCCGAAGATCCTACCAATGATGAACTTAATAAATTGACTGTTAAGGATGATACCAAGAAGTACAGTCTTAATTCCACTGTAGAGTCTAATGATCTGAGTCCAGAGAAGATCCATTGTTCCACGCCAAAGATACCCACAATTAAGGGAGATTTGGGCTTTCCCACTCCGCAAACTTTAATTCCTGATCTGCAAGCTTTAAAACCTACGAAAATGTTTCCTAACATCGATTTTCTTCgtaatgaaaatattaaagctctaaaagaaaatagatttttaaatggggtttctccattttttcctCAGCCTTTTAATCTTACCACAAAACCACCTGTCACTACTGCTACTATTCCAGAACCTGAAAATATTGCCTCGAAGATACATGTAAAACCATTTGACGCTCTTAAGGAAAATATTAACTCTTTTGATGACCATTCTGATGATGAATATTATGACGAAGAAGAAGATGAAGAACAACCACCCATGGATGTGGCGCTTGATTTAAGCAAGAAAAAGATGGACGAAGATAAGAAACGGTTTGAGGAAGAAGGACCACAAGATTTGTCAAAGAAATTTCCAACTTCTCCTATAATTCCGAGGACTGTTCCTAATGTTAGCGAATTATTTGCTCAACAACTGCTTAAAACTCAGCCAAAAATTGACCCAGCTGCTTTGTATGCAACTCAACTAGCGAATATGTATCGTAATGGTTTTGGAGGATGGCCTGGTTTTCCTGTCAATCCTTTGCTATTCCAGGCATTACCAACACTTCCCCGTACTCCTCAAGATCTCAAAGAAAGAATGCAACGGTTTCAACTTTGCGGTGGCTCCTTAATTACTGAAGAgttaaaaaatttccaaaatttacaACATCAGCAAAATAACCAGCCATTACACCAACAGCCTTTGCTAAGTCCCGTTTCTGGTTTTAATGGATTTAAGCCGAGCTTGGAGATCAAGCCACCGATTGTAAGAGAAAACAGTTTTTCTCAACCCTCTCCAAAGAAATCTGAAGATGAGAAACCACTAAGCATTAAGATCGATTCAAATTACGCTGAAACTTCTCCAAAAATGCGTAGTCCAGCTCAACAGTTAAAGCCTGATCTTATGCAATCTCCTAACTCAATCAAAATGGTTATAAAAAATGGTGTTTTAATGCCTAAACAAAAGCAAAGGAGATATAGAACGGAAAGACCGTTTACTTGTGAACACTGCTCTGCTAGGTTCACTCTTCGTTCTAATATGGAAAGACATATCAAACAACAACATCCTCAGTACTGGTCCCAAAGACAAAGAGGAAGTGTGGGGCAGCCTGGTAGAAAACCACAAGGATTATTACTTAAACCAAACTATTGTGACCTGACCATTCCCAACTACGAACTACCAAAGATTCCCGACTATGACGAATCCAAAGAGCATATTCACGAAAAACTAAAGCTTGCTCTCCTAGCTCAACAATACAGGGCAAGTCAATATAACCAAGAGATTAAAAGAGAAGATGATGAAGAGGACTGTGATTTGGTCATCGATGAAAACGAGAACAAGACTGAAGAACCTACTAACCAAAAAATCGAGTACCAAAGAACTCAAATCCTAGAACAGAAACTTAGAGAGCTCCAAGACAAAGTTAAAAACGAAAGAACCGTAAAATCGGAAGAAGATTTGGTCCCAGTATCCAGACTGCTGGACAATGCGTCTCAACAGCAGTTTAAAGAATTCTTCAAGAGGGAAGGTGACGACCACGAACTTGGTGTCTGCAGTGAGGAAGATGAAGAAGGGCTTGTTGCAAGCGGCAGTACTAGCGAGGGAAATATTTCTGGAACAGATGAAAATAGatctgAATCAGAAGCTATTACCAACGCAGCTCCTGCAAAAAAGAAGTCCGCTTACTCACTAGCTCCTAACCGTGTAAGCTGTCCATATTGCAACCGTAAATTCCCATGGACGTCGTCCTTACGTCGCCATATTCTAACTCACACTGGACAAAAGCCTTTCAAATGCAGCCATTGTCCTCTTCTGTTCACCACCAAATCAAACTGTGACCGCCACCTTTTGCGCAAGCATGGAAATTCTGCTACCACCATCGTCACCAATGAAGCCTCGAATAACAACAGCATGAACTACTTAATGCGAAATGTTCCTGAGCGGCCATTTAAATGCTCGAGCTGCCCCAGCAGCACCTTTTCTACATACTCGAATTTAAAGAAGCATATTAGTTGCAAGCACTCCACAAATGCTCAAGGAGATGATATAAAGGCTCAAGGTTATGAAGCAGGGAGTTCTGAGGACGAGAAAGTAAACCAACCCGATACAAGAAACGATTGGGAAAGTCAAATAGCTTACAGCAAGTTCCCGGTAGCCAATAATCTTGAGGGGCATGCTGCAAGTGCCCAAATTCCTAACTCGGATCTGCCATTTAAATGCCATTTGTGTGAAAGCTCTTTTGCTGAGCGCCACCAAGCTTTGGATCACATCAGGGATAAACATGCTTCCGAGTACGATCTGTTGATGTCGAAAAACGCTTTGGACGCCAATGCTACTACTCCCGATGAGGCACCTCATCACGATGAAGAAGATGCAGATATTCGGGGCAAATTTCCTGATTATTCCAACAGAAAAGTGATATGTGCTTGGTGCATGCGAAGATTTTGGTCGGCGGAAGATCTACGACGCCACATGAGAACTCACACTGGTGAGCGACCATTTAGTTGCGACATCTGTCGACGAAGATTTACTCTGAAACATAGCATGTTACGTCACAGAAAGAAGCATGCGATCAACAGCAACTTCGAGAATGACACCACGCATAGTGACGACGATCTTCCCGATGAGAAAAAGAGTTCTTCTTCAAAAGAAGAAGATAAAACCGAGGAATCAGATGCACAGGAGAGCAGTGGAGATTTGATAAGTAATCTTTTAGGGTTAAGAGATAGGTCGATTATTGATAAGGTGCTTGGTGCTTCAGCCGATGACGCGGCTAAATTATTGGGCGTTAGAAATGGAGCTAAGGAATAA
Protein Sequence: MEESLESTHTTKESLVNQSSRGDSGIFSATANTTIDQSSATCDSDNRSDCSSPERKYVCPICDKMLTSQHNFTLHIRSHNNESEVVDNEKGFTCRICHKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHSNKGENYESDGSTDSGSARSIEYNNNKVDSKHTHKRKLETVEESNNKKRNISKTSDEDVQTFKCPVCNRYDFNSVENLETHLEDNHPEYPAKCSHCNQIFLNNKLLTIHKEREHEPNTAKQSIVGFKDLTFVDFSSEKFPYIARHECEINVHKAAGGLKFQCKKCSKAFPCSSSLEIHEKSCLEPPTGLNLSKTNNVSEDEIRRADFFSRLNLQDNSPEKKVPTTRLLKETPTKLKEQLAKVMDNTKDLADIQSILSNINMQQLQSKHNELKISPSKPVIEVGNDSSKNEQEEESQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTREDVKKSIIYHPSEDPTNDELNKLTVKDDTKKYSLNSTVESNDLSPEKIHCSTPKIPTIKGDLGFPTPQTLIPDLQALKPTKMFPNIDFLRNENIKALKENRFLNGVSPFFPQPFNLTTKPPVTTATIPEPENIASKIHVKPFDALKENINSFDDHSDDEYYDEEEDEEQPPMDVALDLSKKKMDEDKKRFEEEGPQDLSKKFPTSPIIPRTVPNVSELFAQQLLKTQPKIDPAALYATQLANMYRNGFGGWPGFPVNPLLFQALPTLPRTPQDLKERMQRFQLCGGSLITEELKNFQNLQHQQNNQPLHQQPLLSPVSGFNGFKPSLEIKPPIVRENSFSQPSPKKSEDEKPLSIKIDSNYAETSPKMRSPAQQLKPDLMQSPNSIKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRQRGSVGQPGRKPQGLLLKPNYCDLTIPNYELPKIPDYDESKEHIHEKLKLALLAQQYRASQYNQEIKREDDEEDCDLVIDENENKTEEPTNQKIEYQRTQILEQKLRELQDKVKNERTVKSEEDLVPVSRLLDNASQQQFKEFFKREGDDHELGVCSEEDEEGLVASGSTSEGNISGTDENRSESEAITNAAPAKKKSAYSLAPNRVSCPYCNRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTNEASNNNSMNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVNQPDTRNDWESQIAYSKFPVANNLEGHAASAQIPNSDLPFKCHLCESSFAERHQALDHIRDKHASEYDLLMSKNALDANATTPDEAPHHDEEDADIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHAINSNFENDTTHSDDDLPDEKKSSSSKEEDKTEESDAQESSGDLISNLLGLRDRSIIDKVLGASADDAAKLLGVRNGAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196640;
90% Identity: iTF_00196640;
80% Identity: -