Basic Information

Insect: Philopedon plagiatum
Gene Symbol: Rreb1
Assembly: GCA_963971165.1
Location: OZ020195.1:4122553-4127317[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1e-05 0.0019 20.9 1.0 1 23 56 78 56 78 0.99

2 16 6e-05 0.012 18.4 1.3 1 23 91 113 91 113 0.98

3 16 2.3e-05 0.0044 19.8 4.1 1 23 119 141 119 141 0.98

4 16 0.2 38 7.4 0.2 1 23 203 227 203 227 0.92

5 16 0.72 1.4e+02 5.6 1.5 2 23 233 255 233 255 0.95

6 16 0.11 21 8.2 1.5 1 21 301 321 301 322 0.94

7 16 0.13 25 7.9 0.1 1 23 453 475 453 475 0.96

8 16 2.7e-05 0.0052 19.5 0.8 1 23 484 506 484 506 0.99

9 16 0.0026 0.5 13.3 2.3 1 23 512 535 512 535 0.97

10 16 0.00089 0.17 14.8 3.0 1 23 944 967 944 967 0.97

11 16 0.00089 0.17 14.8 0.4 2 23 1183 1204 1182 1204 0.97

12 16 0.23 44 7.2 6.3 1 23 1210 1233 1210 1233 0.97

13 16 0.076 15 8.7 1.1 1 20 1263 1283 1263 1284 0.94

14 16 0.26 51 7.0 2.6 1 23 1351 1374 1351 1374 0.96

15 16 0.022 4.4 10.3 0.2 3 23 1421 1441 1419 1441 0.94

16 16 0.013 2.6 11.0 5.9 1 23 1447 1469 1447 1469 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1e-05	0.0019	20.9	1.0	1	23	56	78	56	78	0.99
2	16	6e-05	0.012	18.4	1.3	1	23	91	113	91	113	0.98
3	16	2.3e-05	0.0044	19.8	4.1	1	23	119	141	119	141	0.98
4	16	0.2	38	7.4	0.2	1	23	203	227	203	227	0.92
5	16	0.72	1.4e+02	5.6	1.5	2	23	233	255	233	255	0.95
6	16	0.11	21	8.2	1.5	1	21	301	321	301	322	0.94
7	16	0.13	25	7.9	0.1	1	23	453	475	453	475	0.96
8	16	2.7e-05	0.0052	19.5	0.8	1	23	484	506	484	506	0.99
9	16	0.0026	0.5	13.3	2.3	1	23	512	535	512	535	0.97
10	16	0.00089	0.17	14.8	3.0	1	23	944	967	944	967	0.97
11	16	0.00089	0.17	14.8	0.4	2	23	1183	1204	1182	1204	0.97
12	16	0.23	44	7.2	6.3	1	23	1210	1233	1210	1233	0.97
13	16	0.076	15	8.7	1.1	1	20	1263	1283	1263	1284	0.94
14	16	0.26	51	7.0	2.6	1	23	1351	1374	1351	1374	0.96
15	16	0.022	4.4	10.3	0.2	3	23	1421	1441	1419	1441	0.94
16	16	0.013	2.6	11.0	5.9	1	23	1447	1469	1447	1469	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCGTTGGAAAACAACCACATAACCAAAGAAACATTAGTCAACCAAAGCAGTCGAAGTGATTCGGGTATTTTTTCCGCGACGGCTAACACCACCATCGACCAATCAGCTACTTGTGATAGTGACAACCGAAGTGACTGTAGTTCCCCCGAACGCAAGTACGTCTGTCCCATCTGTGACAAGATGCTTACGTCCCAACACGAGTTCACGTTGCACATTCGATCTCATAACAACGAAAGCGAAGACGTCGACAACGATAAAGGATTCACTTGTAAGATTTGCCATAAGGTGTTGAGTTCCAGTTCTAGTTTAGATCGGCACGTGTTGGTGCACAGTGGCGAGAGACCTTTCAACTGCAAGTATTGTGGTGATACCTTTACAACTAACGGTAATATGCACCGGCACATGAGAACTCACAATAAAGGAGAGAATTACGAGTCTGACGGAAGTACCGATAGTGGAAGTGTAAGAAGCATCgaatataataataacaataaaatcgATTCCAAGCATAACACTAAAAGAAAACTGGAGACTGTAGACGAGAGCAATAACAAAAAACGATGCATCAGTAAAGGAAGCAGTGAAGAAGCCCAAGCTTTCAGGTGCCCTGTCTGCAATAGATACGATTTTAATTCCATTGAAAACCTCGAAACTCATCTAGAAGATAACCATCCAGAATACCCTGCTAAATGTAGCCAGTGTAACCAGatatttcttaataataaactGCTTACGATGCACAAGGAAAGAGAGCATGAGCCCAACATCCACAAACAATCCGTCGTTGGATTTAAAGACCTGACTTTTGTAGATTTCTCAAGTGAAAAGTTTCCTCACATTGCCCGACATGAGTGTGAAATGAACTTACATAGGGCAGCGGGAGGATTAAAGTTTCAATGTCGGAAATGCTCCAAAGCCTTCCCGTGCTCAAGTTCCTTGGAAATTCATGAAAAAAGTTGCTTGGAACCTCTTGCTGGGTTAAATTTAAGCAAGACGAATAACGTTTCTGAAGATGAAATCAGGCGGGCGGATTTTTTCTCCAGATTAAATCTCCAAGATAACTCGCCTGAGAAACTGGTTCCTACCACGAAACCCTCAAAAGAAGCCCCCACTAAACTTAGAGAGCAACTGGCTAAAGTCATGGATAATACCAAAGATTTGGCTGATATTCAGTCAATTTTATCGAATATTAATATGCAACAACTGCAATCGAAACACAACGAACTTAAAATATCTCCATCAAAACCAGCCATCGAAGTTGGCAACGATTCGTCGAAAAATGAACAAGAGGAAGAATCTCAAGACTCATTTGCACTGGAGTTTCGCAAAATGAAACTTCGCGGTGAGTTTCCCTGCCGATTGTGCACTGCGGTATTCCCAAACTTGCGAGCACTAAAAGGCCACAATCGAGCTCATCTAAACGGCAATAACAATGGGACGTACTATTGCAATATGTGCCCTCACTCTTCCATCGATAAAGCTGCCTTAATACGTCATATGAGGACACACAATGGCGATCGCCCTTACGAGTGTGCCCTTTGTAATTATGCCTTTACCACCAAGGCAAATTGTGAAAGACATTTACGAAATCGCCATTCTAAAACCACCAGGGAAGAGGTGAAAAAGTCCATCATCTATCATCCATCTGAGGATCCGACCAATGATGAACTGAATAAACTGGCAGGTAAagatgaaaacaaaaaatacagcCTTAATTCCTCGGCCGAATCTATTGATTTAAGTCCAGAAAAAGTTCATTGCTCTACGCCAAAGATTCCAGTTATAAAGGCAGAGTTAAGTTTCCCTACACCGCCGTCGCTGATACCCGACCTTCAAGCTCTAAAACCTACAAAAATTTTccccaatatcgattttctccGCAACGAAAATCTAAAAGCGCTTAAAGAAACCAGATTTTTAAACGGGGTTCCTCCATTCTTTCCTCGGCCTTTTAGTCTTACTACAAAATCACCTGGTTCTCTTCCAGAACCTGAGGGTCCTGTACCAACAAAGATACAAGTCAAACCTTTCGAAGCCCTCAAAGAGAATGTAAATTCATTCGAAGATCACTCAGAGGATGAATATTACGAAGAGGAAGAGGAGCCACCCATGGATGTGGCTTTGGATTTAAGCAAGAAAAAAATGGACGAGGATAAGAAACGTTTAGAGGAAGAGGGACCACAAGATTTGACAAAGAAATTTCCCACTTCTCCTGTGATCCCCAGAACGGTTCCTAATGTCAATGAACTTTTTGCTCAACAACTTCTTAAATCTCAGCCAAAAATTGACCCTGCTGCGCTGTATGCAACCCAGTTAGCCAATATGTATCGTAATGGTTTTGGCGCATGGCCTGCCTTCCCTGTCAACCCTTTGCTGCTCCAAGCATTACCGACACTTCCTCGTACCCCTCAAGACTTCAAAGAAAGAATGCAACGGTTTCAGCTTTGCGGTGGGTCAATGATTACCGAAGAGCTAAAGAATTTTCACAATTTGCAGCAGCAAAATAATCAGTCACTACATCAACAGCCCTTGCTTAGTCCTGTCTCTGGTTTTAATGGATTTAAGTCTAGTCCCGAGATTAAACCACCTGTAGTAAGAGAAAATAGTTTTTGCCTACCTTCCCCCAAGAAATCTGAAGATGATAAAGCACTTACTGTTAAGATCGATACCAATTATAATGAATCTTCCCCAAAAATTCATAGTCCAGCTCAGCAGTTGAAGCCTGATCTTATGCAGTCGCCTAATTCAATAAAGATGGTTATTAAAAATGGCGTTTTAATGCCGAAGCAAAAGCAAAGGAGATATAGAACGGAGAGGCCTTTTACTTGCGAGCATTGCTCTGCTCGATTTACTCTTCGTTCCAACATGGAGAGACATATCAAGCAACAACATCCCCAATTCTGGTCTCAGAGGCAAAGAGGTAGCGTTGGACAGCCTGGTAGAAAACCTCAAGGTTTGTTACTGAAACCAAACTATTGCGATCTAACAATCCCAAACTATGAATTATCAAAATTACCAGACTTCGACGAAGCCAAAGAGCATATAcacgaaaaattaaaacttgCTCTCTTAGCTCAGCAATACAGAGCCAATCAATTTAACCTAGACACTAAAaaagaagaagatgaagaagaaGATTGTGATTTGGTCATCGATGAAAACGAAAACAAGACTGAAGACTGTACTAACCAAAAAATTGAGTACCAAAGAACTCAAATCCTAGAACAGAAACTCCGAGAACTCCAAGACAAAGTTAAGAATGAAAGAAACATAAAGTCAGAAGAAGATTTAGTTCCAGTGTCGAGACTCCTGGACAATGCCTCTCAACAGCAGTTCAAGGAATTCTTTAAGAGGGAAGGAGATGACCATGAACTTGGTGCTGGCAGTGAAGAAGATGAAGAAGGTCTTGTTGCCAGCGGCAGTACCAGTGAGGAAAATGTTTCTGGAACAGATGAAAATAGaTCAGAATCAGAAGCTGTTACCAACGCCGTTCCTGTAAAGAAAAAGTCTGCCTATTCTCTAGCTCCTAACCGTGTAAGTTGTCCATATTGTAGCCGTAAATTTCCGTGGACTTCGTCTTTACGCCGCCATATTTTGACACACACCGGTCAGAAACCTTTCAAGTGCAGTCACTGTCCTCTTCTGTTTACCACCAAATCCAATTGCGACCGCCATCTCCTGCGCAAGCACGGCAACTCAGCTACCACTATCGTCACCAGTGAAGCATCCAACGCCAACAGCATGAACTATTTAATGAGGAATGTTCCTGAGCGCCCATTTAAATGCTCTAGTTGTCCCAGCAGTACCTTTTCTACATACTCAAATCTAAAAAAGCATATCAGTTGCAAGCACTCTACTAATGCTCAGGGCGATGACATTAAAGCTCAGGGTTATGAAGCAGGTAGTTCTGAGGACGAAAAAGTAAACCAAGCTGAGGCGAAGAACGACTGGGAAAATCAAATTTCTTACAGCAAGTTTCCTGTATCCAACAGTCTCGAAGTACATGCAGCAAACACCCAAATCCCAAACTCAGATCTGCCATACAAATGCCATTTATGCGAGAGTTCGTTTGCGGAGCGCCACCAAGCGTTGGATCATATCCGAGATAAGCACGCTTCCGAGTATGATCTGTTGATGTCCAAAAATGCTTTGGACGCCAACGCTACTACTCCAGATGAAGCACCTCATCACGAAGAAGAGGAGACGGACATTCGTGGTAAATTTCCAGATTATTCGAACCGAAAGGTGATCTGTGCGTGGTGCATGCGTAGATTCTGGTCTGCGGAAGATTTGCGACGCCATATGCGCACCCACACTGGCGAACGGCCGTTCAGTTGCGACATCTGCAGACGCAGATTTACTTTAAAGCACAGCATGTTGCGCCACAGGAAGAAGCATGCCATCAACAGCAACGTTGAAAACGATACCACCCATAGTGATGAAGAGGCACCAGAGGAGAAGAAGAGTTCTTCTTCAAAGGAAGGTGACAAGACGGAAGAATCGGATGCCCAAGAGAGTGGTGGTGATTTAATAAGTAATCTCTTAGGGTTAAGAGATAGGTCTATTATTGATAAGGTGCTAGATGCTTCGGCTGATGACGCAGCTAAACTGTTAGGCGTGAGAAATGGAGCTAaggaatag
Protein Sequence: MEESLENNHITKETLVNQSSRSDSGIFSATANTTIDQSATCDSDNRSDCSSPERKYVCPICDKMLTSQHEFTLHIRSHNNESEDVDNDKGFTCKICHKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHNKGENYESDGSTDSGSVRSIEYNNNNKIDSKHNTKRKLETVDESNNKKRCISKGSSEEAQAFRCPVCNRYDFNSIENLETHLEDNHPEYPAKCSQCNQIFLNNKLLTMHKEREHEPNIHKQSVVGFKDLTFVDFSSEKFPHIARHECEMNLHRAAGGLKFQCRKCSKAFPCSSSLEIHEKSCLEPLAGLNLSKTNNVSEDEIRRADFFSRLNLQDNSPEKLVPTTKPSKEAPTKLREQLAKVMDNTKDLADIQSILSNINMQQLQSKHNELKISPSKPAIEVGNDSSKNEQEEESQDSFALEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTREEVKKSIIYHPSEDPTNDELNKLAGKDENKKYSLNSSAESIDLSPEKVHCSTPKIPVIKAELSFPTPPSLIPDLQALKPTKIFPNIDFLRNENLKALKETRFLNGVPPFFPRPFSLTTKSPGSLPEPEGPVPTKIQVKPFEALKENVNSFEDHSEDEYYEEEEEPPMDVALDLSKKKMDEDKKRLEEEGPQDLTKKFPTSPVIPRTVPNVNELFAQQLLKSQPKIDPAALYATQLANMYRNGFGAWPAFPVNPLLLQALPTLPRTPQDFKERMQRFQLCGGSMITEELKNFHNLQQQNNQSLHQQPLLSPVSGFNGFKSSPEIKPPVVRENSFCLPSPKKSEDDKALTVKIDTNYNESSPKIHSPAQQLKPDLMQSPNSIKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGSVGQPGRKPQGLLLKPNYCDLTIPNYELSKLPDFDEAKEHIHEKLKLALLAQQYRANQFNLDTKKEEDEEEDCDLVIDENENKTEDCTNQKIEYQRTQILEQKLRELQDKVKNERNIKSEEDLVPVSRLLDNASQQQFKEFFKREGDDHELGAGSEEDEEGLVASGSTSEENVSGTDENRSESEAVTNAVPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTSEASNANSMNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVNQAEAKNDWENQISYSKFPVSNSLEVHAANTQIPNSDLPYKCHLCESSFAERHQALDHIRDKHASEYDLLMSKNALDANATTPDEAPHHEEEETDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHAINSNVENDTTHSDEEAPEEKKSSSSKEGDKTEESDAQESGGDLISNLLGLRDRSIIDKVLDASADDAAKLLGVRNGAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196640;
90% Identity: -
80% Identity: -