Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: Rreb1
Assembly: GCA_963969555.1
Location: OZ018375.1:16328174-16333112[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.5e-06 0.00066 22.1 1.3 1 23 57 79 57 79 0.99

2 16 0.00019 0.035 16.7 1.2 1 23 92 114 92 114 0.98

3 16 2e-05 0.0036 19.8 4.1 1 23 120 142 120 142 0.98

4 16 0.12 22 7.9 0.3 1 23 205 229 205 229 0.92

5 16 0.35 65 6.4 2.7 2 23 235 257 235 257 0.95

6 16 0.053 9.9 9.0 0.9 1 20 303 322 303 324 0.93

7 16 0.11 21 7.9 0.1 1 23 455 477 455 477 0.96

8 16 2.3e-05 0.0043 19.5 0.8 1 23 486 508 486 508 0.99

9 16 0.0022 0.41 13.3 2.3 1 23 514 537 514 537 0.97

10 16 0.00077 0.14 14.7 3.0 1 23 952 975 952 975 0.97

11 16 0.00077 0.14 14.7 0.4 2 23 1190 1211 1189 1211 0.97

12 16 0.2 36 7.2 6.3 1 23 1217 1240 1217 1240 0.97

13 16 0.066 12 8.7 1.1 1 20 1270 1290 1270 1291 0.94

14 16 0.33 62 6.5 2.8 1 23 1358 1381 1358 1381 0.96

15 16 0.019 3.6 10.3 0.2 3 23 1428 1448 1426 1448 0.94

16 16 0.012 2.2 11.0 5.9 1 23 1454 1476 1454 1476 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.5e-06	0.00066	22.1	1.3	1	23	57	79	57	79	0.99
2	16	0.00019	0.035	16.7	1.2	1	23	92	114	92	114	0.98
3	16	2e-05	0.0036	19.8	4.1	1	23	120	142	120	142	0.98
4	16	0.12	22	7.9	0.3	1	23	205	229	205	229	0.92
5	16	0.35	65	6.4	2.7	2	23	235	257	235	257	0.95
6	16	0.053	9.9	9.0	0.9	1	20	303	322	303	324	0.93
7	16	0.11	21	7.9	0.1	1	23	455	477	455	477	0.96
8	16	2.3e-05	0.0043	19.5	0.8	1	23	486	508	486	508	0.99
9	16	0.0022	0.41	13.3	2.3	1	23	514	537	514	537	0.97
10	16	0.00077	0.14	14.7	3.0	1	23	952	975	952	975	0.97
11	16	0.00077	0.14	14.7	0.4	2	23	1190	1211	1189	1211	0.97
12	16	0.2	36	7.2	6.3	1	23	1217	1240	1217	1240	0.97
13	16	0.066	12	8.7	1.1	1	20	1270	1290	1270	1291	0.94
14	16	0.33	62	6.5	2.8	1	23	1358	1381	1358	1381	0.96
15	16	0.019	3.6	10.3	0.2	3	23	1428	1448	1426	1448	0.94
16	16	0.012	2.2	11.0	5.9	1	23	1454	1476	1454	1476	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCCCTGGAATCCACCCACACAACCAAAGAAACATTAGTCAACCACAGTAGCCGCGGTGACTCAGGAATTTTTTCAGCCACCGCCAATACAAGCATCGACCAGTCATCAGCAACTTGTGATAGTGACAATCGAAGTGACTGCAGTTCCCCCGAACGCAAATACGTCTGTCCGATCTGCGACAAAATGCTGACCTCACAACACAACTTTACTTTGCACATCCGATCTCATAACAACGAAAGCGAAATCGTGGACAATGAAAAGGGCTTTACCTGTAGAATCTGCCATAAAGTGCTCAGCTCTAGTTCTAGTTTGGATCGGCACGTGTTGGTGCATAGTGGTGAGCGACCCTTCAACTGCAAATACTGCGGTGATACTTTCACTACGAATGGTAATATGCATCGGCATATGAGAACCCACTCGAATAAAGGAGAGAACTACGAGTCTGATGGAAGTACTGATAGTGGCAGTGCGAGAAGCATcgaatacaataataataaagttgaTTCCGTCAAGCACACCCACAAAAGGAAACTTGAAACTATCGATGAGAGCAATAATAAGAAACGCATCATTTCCAAAGCAAGCGACGATGAACTTCAAACCTTCAAATGTCCGGTATGCAATCGATACGACTTTAATTCAATAGAAAATCTCGAGACTCATTTGGAAGACAACCATCCAGAGTACCCTGCTAAATGTAGCCACTGCAACCAAATATTCCTCAATAATAAATTGCTCACTATCCACAAGGAGCGGGAACATGAGCCCAATACGCCTAAGCAATCAGTAGTTGGATTCAAAGACCTTACGTTCGTAGATTTTTCTAGTGAAAAGTTTCCTTACATTGCCAGACATGAGTGCGAAATAAATGTGCATAAGGCTGCAGGAGGGCTTAAATTCCAATGCCAGAAATGCTCCAAAGCCTTTCCATGCTCAAGTTCCTTGGAGATACACGAAGAAAGCTGCCTGGAACCGCCTGCTGGTTTAAATTTAAGCAAGACTAACAACGTGTCACAAGATGAAATCAGGCGAGCAGATTTCTTCTCGAGACTAAATCTTCAAGATAACTCGCCCGAGAAGAAGGTTCCCACAACTAAACCCGTAAAAGAAACACCTACTAAACTAAGGGAACAGCTGGCAAAAGTCATGGATAATACCAAAGATTTGGCTGATATTCAGTCAATTTTATCTAACATTAACATGCAACAACTGCAATCGAAACACAACGAACTTAAAATATCGCCATCCAAACCAATCATCGAAGTTGGTAACGATTCAACGAAGAATGAACAAGAAGAAGAATCTCAAGACTCATTTGCAATTGAGTTTCGAAAAATGAAACTTCGCGGTGAGTTTCCATGCCGATTGTGCACTGCAGTGTTTCCTAACTTACGAGCACTTAAAGGCCATAACAGAGCTCATCTAAATGGAAATAACAATGGTACTTATTACTGCAATATGTGCCCCCACTCGTCCATTGACAAAGCTGCTCTTATTCGACATATGAGAACCCACAATGGCGATCGCCCATATGAATGTGCACTTTGTAATTATGCGTTTACAACCAAAGCTAATTGCGAAAGACATTTGAGAAATCGCCATTCAAAAACCACAAGAGAAGATGTTAAGAAGTCCATTATTTACCATCCTTCCGAAGATCCTACCAATGATGAACTTAATAAATTGACTATTAAGGATGATAACAAGAAACACAGCCTCAATTCCTCTGTAGAGTCTAATGAGTTGAGCCCAGAGAAGATCCATTGTTCCACACCAAAGATATCCACAATTAAGGCAGATTTGGGTTTTCCTACTCCGCAAACTCTAATTCCTGATCTGCAAGCTTTAAAACCTACGAAAATGTTTCCAAACATCGATTTTCTTCGTAATGAAAATCTTAAGGCCCTGAAAGAAaacagatttttaaatggggttCCTCCGTTCTTCACTCAGCCTTTTAATCTTACCACAAAACCACCTATCATTCCTGCAACTATTCCAGAACCTGACAATATTGCCTCCAAGATTCATGTGAAACCATTTGACTCTCTGAAGGAAAATATAAACTCATTTGATGAACATTCTGATGATGAATATTATGAGGATGAAGAAGATGAAGAACAACCAGCTATGGATGTGGCACTtgatttaagcaaaaaaaagatGGACGAAGATAAGAAACGGTTTGAGGAAGAAGGTCCGCAAGATTTGTCAAAGAAATTTCCAACTTCTCCTTTAATTCCGAGACCTGTTCCTAATGTTGGCGAATTATTTGCTCAACAACTGCTTAAATCTCAGCCAAAAATTGATCCGGCCGCTTTGTACGCTACTCAACTAGCGAATATGTATCGTAATGGTTTTGGAGGCTGGCCTGGTTTTCCCGTCAATCCTTTGCTCTTTCAAGCATTACCAACACTGCCCCGTACTCCTCAGGATCTCAAAGAAAGAATGCAACGGTTTCAACTTTGCGGTGGCTCCTTAATTACAGAAGagttaaaaaatttccaaaGTTTACAACAGCAGCAAAATAACCAGCCATTACATCAACAGCCTTTGCTAAGTCCCGTTTCTGGTTTTAATGGATTTAAACCAAGTTCGGAAATTAAGCCACCGATGGTAAGGGAACACAGTTTTTCTCAACATTCCCCAAAGAAATCTGAAGATGACAAACCACTTAGTGTTAAGATCGATACAaattttactgaaacatctCCAAAAATGCGTAGTCCAGCTCAGCAGTTAAAGCCTGATCCTATGCAATCTCCTAATTCAATCAAGATGGTTATAAAAAATGgtgttttaatgccaaaacaaAAGCAAAGGAGATATAGAACGGAAAGACCGTTTACCTGTGAACACTGCTCCGCTAGGTTTACTCTTCGTTCTAACATGGAAAGACATATCAAACAACAACATCCTCAGTACTGGTCCCAAAGACAAAGAGGCAGTGTCGGACAGCCCGGTAGAAAACCTCAGGGATTGTTGCTGAAACCAAACTATTGTGACATGACGATACCCAACTATGAACTACCAAAGATGCCCGACTATGACGAAACCAAAGAGCACATTCACGAGAAACTCAAGTTTGCTCTCATAGCTCAACAATACAGAGCAAGTCAATACAACCAGGAAATTAAAAGAGAAGATGATGAGGAGGACTGTGATTTAGTCATCGACGAAAACGAAAACAAGACTGAAGAACCTACTAACCAAAAAATCGAGTACCAAAGAACTCAAATCCTAGAACAGAAACTTAGAGAGCTCCAAGATAAAGTTAAAAACGAAAGAACCGTGAAATCGGAGGAAGATTTGGTCCCGGTATCGAGACTGCTGGACAATGCGTCTCAACAACAGTTTAAAGAATTCTTTAAAAGGGAAGGTGATGACCACGAACTTGGTGTTGGCAGTGAGGAAGATGAAGAAGGCCTTGTTGCAAGCGGCAGCACTAGTGAGGGAAATATTTCTGGAACAGATGAAAATAgATCTGAATCAGAAGCCGTTACCAACACAGCTCCTGCAAAAAAGAAGTCCGCTTACTCACTAGCTCCTAACCGTGTAAGCTGTCCATATTGCAGCCGCAAATTTCCGTGGACGTCATCTTTACGCCGTCATATCCTAACTCACACTGGACAAAAACCTTTTAAATGCAGCCATTGTCCTCTTTTGTTCACCACCAAATCTAACTGCGATCGCCACCTCCTACGCAAGCATGGCAACTCGGCTACTACTATCGTCACCAGCGAAGCCTCGAATACCAACAGCATGAATTATTTAATGAGAAATGTTCCCGAGCGGCCATTTAAATGCTCCAGCTGTCCCAGCAGCACCTTTTCTACATACTCGAATTTAAAAAAGCATATTAGTTGCAAGCATTCTACCAATGCTCAAGGAGATGATATTAAGGCTCAAGGTTATGAAGCAGGCAGTTCTGAGGACGAAAAAGTCAACCAACCCGAGACCAAAAATGACTGGGAGAGTCAAATTGCTTACAGCAAGTTTCCGGTAGTCAATAATCTCGAGGGACACGCTGGTAATGCCCAAATCCCCAACTCGGACCTGCCATTTAAATGCCATTTATGCGAAAGCTCTTTTGCCGAGCGCCACCAAGCTTTGGATCACATCAGAGATAAGCATGCCTCCGAGTACGATCTGTTGATGTCGAAAAATGCTTTGGACGCCAACGCTACCACACCCGACGAGGCATCTCATCATGATGAAGAAGATGTAGATATTCGGGGCAAGTTTCCTGATTATTCCAACAGAAAAGTGATCTGCGCTTGGTGCATGCGAAGATTTTGGTCGGCAGAAGATCTGCGACGTCACATGCGTACTCACACGGGCGAGCGACCATTCAGTTGCGACATCTGTAGGCGAAGATTCACTCTGAAACACAGCATGTTACGTCACAGGAAGAAACATGCGATCAACAGCAACTTCGAGAATGACACCACGCATAGTGACGAAGATCTTCCGGATGAGAAAAAAAGTTCGTCTTCAAAGGAAGAAGATAAAACAGAGGAATCGGATGCCCAGGAAAGCAGTGGAGATTTGATTAGTAATCTTTTAGGGTTAAGAGATAGATCGATTATTGATAAGGTGCTGGGCGCTTCAGCTGATGACGCGGCTAAGTTATTGGGCGTCAGAAATGGAGCCAATaaggaataa
Protein Sequence: MEESLESTHTTKETLVNHSSRGDSGIFSATANTSIDQSSATCDSDNRSDCSSPERKYVCPICDKMLTSQHNFTLHIRSHNNESEIVDNEKGFTCRICHKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHSNKGENYESDGSTDSGSARSIEYNNNKVDSVKHTHKRKLETIDESNNKKRIISKASDDELQTFKCPVCNRYDFNSIENLETHLEDNHPEYPAKCSHCNQIFLNNKLLTIHKEREHEPNTPKQSVVGFKDLTFVDFSSEKFPYIARHECEINVHKAAGGLKFQCQKCSKAFPCSSSLEIHEESCLEPPAGLNLSKTNNVSQDEIRRADFFSRLNLQDNSPEKKVPTTKPVKETPTKLREQLAKVMDNTKDLADIQSILSNINMQQLQSKHNELKISPSKPIIEVGNDSTKNEQEEESQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTREDVKKSIIYHPSEDPTNDELNKLTIKDDNKKHSLNSSVESNELSPEKIHCSTPKISTIKADLGFPTPQTLIPDLQALKPTKMFPNIDFLRNENLKALKENRFLNGVPPFFTQPFNLTTKPPIIPATIPEPDNIASKIHVKPFDSLKENINSFDEHSDDEYYEDEEDEEQPAMDVALDLSKKKMDEDKKRFEEEGPQDLSKKFPTSPLIPRPVPNVGELFAQQLLKSQPKIDPAALYATQLANMYRNGFGGWPGFPVNPLLFQALPTLPRTPQDLKERMQRFQLCGGSLITEELKNFQSLQQQQNNQPLHQQPLLSPVSGFNGFKPSSEIKPPMVREHSFSQHSPKKSEDDKPLSVKIDTNFTETSPKMRSPAQQLKPDPMQSPNSIKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRQRGSVGQPGRKPQGLLLKPNYCDMTIPNYELPKMPDYDETKEHIHEKLKFALIAQQYRASQYNQEIKREDDEEDCDLVIDENENKTEEPTNQKIEYQRTQILEQKLRELQDKVKNERTVKSEEDLVPVSRLLDNASQQQFKEFFKREGDDHELGVGSEEDEEGLVASGSTSEGNISGTDENRSESEAVTNTAPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTSEASNTNSMNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVNQPETKNDWESQIAYSKFPVVNNLEGHAGNAQIPNSDLPFKCHLCESSFAERHQALDHIRDKHASEYDLLMSKNALDANATTPDEASHHDEEDVDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHAINSNFENDTTHSDEDLPDEKKSSSSKEEDKTEESDAQESSGDLISNLLGLRDRSIIDKVLGASADDAAKLLGVRNGANKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196640;
90% Identity: iTF_00196640;
80% Identity: -