Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: Rreb1_1
Assembly: GCA_030620095.1
Location: JAUTXW010002753.1:4815903-4822054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.6e-06 0.0012 22.1 1.3 1 23 58 80 58 80 0.99

2 15 0.00027 0.069 16.5 0.4 1 23 93 115 93 115 0.98

3 15 0.00062 0.16 15.4 6.6 1 23 121 143 121 143 0.98

4 15 0.53 1.3e+02 6.2 0.6 2 23 236 258 236 258 0.95

5 15 0.25 63 7.2 1.4 1 21 304 324 304 325 0.91

6 15 0.14 37 7.9 0.1 1 23 459 481 459 481 0.96

7 15 0.00013 0.033 17.5 1.0 1 23 490 512 490 512 0.99

8 15 0.0017 0.42 14.0 3.1 1 23 518 541 518 541 0.97

9 15 0.001 0.25 14.7 3.0 1 23 954 977 954 977 0.97

10 15 0.001 0.25 14.7 0.4 2 23 1193 1214 1192 1214 0.97

11 15 0.25 64 7.2 6.3 1 23 1220 1243 1220 1243 0.97

12 15 0.085 22 8.6 1.1 1 20 1273 1293 1273 1294 0.94

13 15 1.4 3.6e+02 4.8 2.9 1 23 1361 1384 1361 1384 0.96

14 15 0.025 6.4 10.3 0.2 3 23 1431 1451 1429 1451 0.94

15 15 0.015 3.8 11.0 5.9 1 23 1457 1479 1457 1479 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.6e-06	0.0012	22.1	1.3	1	23	58	80	58	80	0.99
2	15	0.00027	0.069	16.5	0.4	1	23	93	115	93	115	0.98
3	15	0.00062	0.16	15.4	6.6	1	23	121	143	121	143	0.98
4	15	0.53	1.3e+02	6.2	0.6	2	23	236	258	236	258	0.95
5	15	0.25	63	7.2	1.4	1	21	304	324	304	325	0.91
6	15	0.14	37	7.9	0.1	1	23	459	481	459	481	0.96
7	15	0.00013	0.033	17.5	1.0	1	23	490	512	490	512	0.99
8	15	0.0017	0.42	14.0	3.1	1	23	518	541	518	541	0.97
9	15	0.001	0.25	14.7	3.0	1	23	954	977	954	977	0.97
10	15	0.001	0.25	14.7	0.4	2	23	1193	1214	1192	1214	0.97
11	15	0.25	64	7.2	6.3	1	23	1220	1243	1220	1243	0.97
12	15	0.085	22	8.6	1.1	1	20	1273	1293	1273	1294	0.94
13	15	1.4	3.6e+02	4.8	2.9	1	23	1361	1384	1361	1384	0.96
14	15	0.025	6.4	10.3	0.2	3	23	1431	1451	1429	1451	0.94
15	15	0.015	3.8	11.0	5.9	1	23	1457	1479	1457	1479	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCGCTCGAAAACAACCACATCGCCAAAGATACGTTAGTCAACCAAAGCAACAGGAGCGACTCGGGTTTTTTGTCAGCAACGGTTAACACCTCCATCGACCAGTCGACGACCACTTGTGATAGCGACAACCGCAGCGACTGCAGCTCGCCGGGAGGGCGCAAATACGTATGCCCCATATGCGATAAAATGCTGACTTCGCAGCACAATTTCACCCTGCACATACGATCTCACAATAACGAAGCAGAGGACCCAGTCAACGAGAAAGGGTTCACTTGCAGGATCTGCCAAAAAGTGCTCAGTTCGAGTTCGAGCCTGGACAGGCACGTACTGGTGCACAGCGGTGAAAGACCATTCCACTGTAAATTTTGTGGCGACACCTTCACCACCAACGGCAACATGCATCGTCATATGAGAACGCACTCGAACAAGGGAGAGAATTACGAGTCTGACGGCAGTACTGACAGCGGCAGTGCCAAGAGCATCGAATTCAACAACAACAAGGTGGATTCGAAGCACGGCAACAAGAGGAAACTCGAAGACGCGGAAGAAAACGAGGTCAATAAAAAATTCGCCACCATCAACCACGAGGGCGGCGGTGCTCAATCTTTCAGGTGTCCCGTCTGCGAAAGATCTGACTTTAACTCCATAGAAATCCTAGAGGCTCACCTGGAAGACAACCATCCGGAATATCCGGCGAAGTGTAGCCAATGCAACCAAATATTCCTCAATAACAAACTTCTTATCGTTCACAAGGAGAGAGTCCACGACGTTAACGTCAAACAACCGATCGTTCAAGGATTCAACGATCTAACTTTTGTAGATTTCTCGAGCAAAAAGTTTCCCTACATAGCGAGACGCGAGTGTGAAATCAATCCACACAAATCCGCGGGGGGTCTAAAGTTTCAATGCCAAAAATGCTCCAAAGCTTTCCCCTGCTCAAACTCCCTGGAAATTCACGAGAAAAGCTGCCTTGAATCGCCGACCGGTTTGAATCTTAGCAAATCGAACGGTATCTCCGAAGACGAAATCCGAAGGGCTGAGTTTTTCTCCAGGTTGAATCTCCAAGATAATTCTCCAGAGAAGAAAGTTCCTATACCCTTTCCTCATTTAAGGGAGTCCCCCAATAAACTCAGGGAGCAATTGGCCAAGGCCATGGATAATACCAAAGATTTGGCTGATATTCAGTCGATTTTGTCTAATATTAATATGCAGCAACTGCAAACCAAACACAACGAACTAAGGATGCCCCCTACCGCTCCCAAACCGACGCTGGAAGTTGGTAACGACCCATCGAAGAACGAAAACGAAGAAGAATCTCAAGACTCGTTCGCTATAGAGTTCAGGAAAATGAAATTGCGTGGTGAGTTTCCTTGCCGCCTGTGCACCGCAGTTTTTCCGAACCTTCGCGCCCTCAAAGGTCACAACCGGGCACATCTTAGTGGAAACAATAACGGTACTTATTACTGCAATATGTGTCCCCACTTCTCCATCGACAAGGCTGCTCTTATCCGCCATATGAGAACACACAATGGCGATCGCCCTTACGAATGTTCGCTTTGCAATTATGCTTTCACGACCAAAGCTAACTGCGAAAGGCACCTGAGAAATCGCCACTCCAAAACCACCAGGGAAGACGTGAAGAAGTCCATTATCTACCACCCCTCCGAGGATCCAACGAACGACGAGCTTAACAAACTGACTATAAAGGACGAGAACAAGAAACACATTTTCAGCTCTCCTCCCAGTGAAACATCAAGGGATATGTGTCCTGAGAAAGTTCACTGTTCCACACCGAAAATACCCCCACCAATGAAAACTGAGGTCACTTTTCCGACTCCTACTTTGGTCCCTGATTTGCAAGCTTTGAAACCAACTAAAATATTCTCCAACCTTGACTTCATTCGCAACGAGAACATCAAGGCCCTAAAGGAGAACAGATACCTTAATGGCCATCCGCCTTTCTTCCCGCAGCCTTTTAGTTTGACTAATAAACTCATACCTAGCACCATACCTCCACCCGAAAGCATTGCCACTCAAATACACGTCAAACCATTTGAAGCTCTCAGAGAGACTAACAGCTCGTTTGACCAATCTGAAGATGAGTACTACGAAGAGGAGGAGGAAGAAGAACCCCCTATGGATGTGGCTCTGGATTTGAGCAAGAAAAAGATGGACGAAGACAGGAAACGTTTGGAGGAAGACGAGGAACCGCAGGACTTAACCAAAAAGGTTCCTATTTCTCCGGGAATACCACGGACGGTTCCTAACATGAACGAACTCTTTACGCAGCACCCCGCCGCTGCTTTGTATGCTTCGCAGTTGGCTAACTTGTATCGAAATGGTTTTGCCGCAGCATGGCCCGGTTTTCCGGTGAACCCTCTGCTTCTGCAGACTCTCCCGACTCTACCTCGTACTCCTCAAGATCTAAAGGAGAGAATGCAGAGGCTTCAACTTTGCGGAGGCTCCATGATTACTGAAGAGTTTAAGAATTTTCCAAATATGCCTCAACCACCGATAAGTCAACCACAGTTTCAGCCACCGCTAGAAAGCCCTGTCAATCACCATTATAACGGCTTGAAATTGAGTCCCGAAGGCAAGCCACCGTTGTCGAGAGAAAACAGTTTCACTCAACCGTTACCGAAAACTGTTGAGGAACACGAAGACCACAAGCCTCTGACCGTTAACGTCGAAACGACCTTTAACGATAATGCTGCGCCCAAAATGCACAGTCCTGCCGCTCACCAGTTAAAACAAGACTTGATGCAGTCGCCGAATTCGGTGAAAATGGTAATCAAAAATGGCGTGTTGATGCCGAAGCAAAAGCAAAGAAGGTACCGCACCGAACGTCCCTTCACGTGCGAACATTGCTCTGCTAGATTCACTCTCCGATCGAATATGGAGAGGCACATCAAGCAGCAACACCCGCAGTTTTGGTCGCAAAGGCAACGAGGTACTGCCGTCGGACAACCCGGAAGAAAACCCCAAGGTCTCCTGCTCAAACCCAACTATTGCGGCTTAAGAACACCCGAGTACGATATTCCAAAGATTCACGATTACGACGATACCAAAGATCATATTAATGAAAAACTGCGCTTTGCCCTGTTGGCCCAACAACTGCGGGCGAATCGCTTCAACCAAGATATTAAAAAAGAGGACGACGAAGAAGAGTGCGATTTGGTCATCGACGAAAACGAAAACAATAAGACTGAAGAAGCTAACGGTAACCAAAACCTGGAGAGGAGTAAAATCCTTCAACAAAGACTTAGAGAGTTACACGAGAAAGCTAGGAACGAGAGGAGTTCCAGGGGAGAAGAAGATCTGGTGCCGGTGTCGAGGCTGTTGGACAACGCGTCTCAGCAACAATTCAAGGAGTTCTTCAAACGCGAGGGTGATGATCACGAAGTTGGCGTTGCCAGCGAAGAAGACGAAGAAGGGCTGGTAGCCAGTGGCAGTACTAGCGAAGGGAACGTGTCTGGAACGGATGAAAATAGGTCCGAATCAGAAACAGTCAACAACGCAGCCCCGGTAAAGAAAAAATCGGCCTACTCCCTGGCACCCAACCGGGTCAGCTGCCCCTACTGCAGCCGCAAATTCCCATGGACCTCTTCGCTACGACGCCATATTTTGACTCATACCGGACAGAAGCCCTTCAAGTGCAGTCACTGCCCGCTTTTGTTCACGACGAAATCCAACTGTGACCGCCACCTGCTGAGGAAACACGGCAATTCTGCCACCACCATAGTGACCAACGAGGCTTCCAACAACAACAGCATCAACTATATGATGCGAAACGTGCCCGAGAGACCTTTCAAGTGTTCGAGTTGCCCTAGCAGTACTTTTTCGACGTACTCGAACCTAAAGAAGCACATCAGTTGCAAACACTCGACGAACGCTCAGGGAGACGACATTAAAGCTCAAGGGTACGAAGCCGGAAGTTCGGAGGACGAAAAGGTTAATCAGCCCGAACCGAAAAACGATTGGGAAAGCCAAATAGCCTACAGTAAGTTCGCCGTAGTTCCCAACCCCGAGGTCCACCCGGTGGCCAGTCAAGTTCCTAATTCGGACCTGCCCTTCAAGTGTCACTTGTGTGAAAGCTCTTTCGGGGAACGACATCAGGCTCTCGACCACATCAGGGACAAGCACGCCTCCGAGTACGATCTGCTCATGTCGAAAAACGCTCTGGACGCCAGCGCTACCACCCCGGACGAAGCGCCGCACCACGACGAAGAGGACTCCGACATTCGAGGTAAATTTCCCGATTACTCTAACCGAAAAGTGATCTGCGCCTGGTGCATGCGCCGATTCTGGTCGGCGGAAGACTTGCGCAGGCACATGCGCACCCACACGGGAGAGCGACCGTTCAGCTGCGACATTTGCCGGAGGAGGTTCACCCTCAAGCACAGCATGTTGCGTCACAGAAAGAAACACGCGCTGAACAGCAATTTCGAGCAGGATACTACGCATAGCGACGAGGATGGCAACAACCCGGAGATGCCGATCGCTCAGGAGGAACACGCTAAGGATTCCACTCAACGGGTCGATAAAATGGATGAGTCGGACACGCAGGAAGGAGGTGGTGATCTGATCAGCAATCTTTTAGGTTTAAGGGATCGAACTATCATCGATAAGGTGCTGGACGCCTCGGCAGATGACGCCGCCAAGTTGTTGGGCGTCAAAAATGGAGTTAAagagtaa
Protein Sequence: MEESLENNHIAKDTLVNQSNRSDSGFLSATVNTSIDQSTTTCDSDNRSDCSSPGGRKYVCPICDKMLTSQHNFTLHIRSHNNEAEDPVNEKGFTCRICQKVLSSSSSLDRHVLVHSGERPFHCKFCGDTFTTNGNMHRHMRTHSNKGENYESDGSTDSGSAKSIEFNNNKVDSKHGNKRKLEDAEENEVNKKFATINHEGGGAQSFRCPVCERSDFNSIEILEAHLEDNHPEYPAKCSQCNQIFLNNKLLIVHKERVHDVNVKQPIVQGFNDLTFVDFSSKKFPYIARRECEINPHKSAGGLKFQCQKCSKAFPCSNSLEIHEKSCLESPTGLNLSKSNGISEDEIRRAEFFSRLNLQDNSPEKKVPIPFPHLRESPNKLREQLAKAMDNTKDLADIQSILSNINMQQLQTKHNELRMPPTAPKPTLEVGNDPSKNENEEESQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLSGNNNGTYYCNMCPHFSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKTTREDVKKSIIYHPSEDPTNDELNKLTIKDENKKHIFSSPPSETSRDMCPEKVHCSTPKIPPPMKTEVTFPTPTLVPDLQALKPTKIFSNLDFIRNENIKALKENRYLNGHPPFFPQPFSLTNKLIPSTIPPPESIATQIHVKPFEALRETNSSFDQSEDEYYEEEEEEEPPMDVALDLSKKKMDEDRKRLEEDEEPQDLTKKVPISPGIPRTVPNMNELFTQHPAAALYASQLANLYRNGFAAAWPGFPVNPLLLQTLPTLPRTPQDLKERMQRLQLCGGSMITEEFKNFPNMPQPPISQPQFQPPLESPVNHHYNGLKLSPEGKPPLSRENSFTQPLPKTVEEHEDHKPLTVNVETTFNDNAAPKMHSPAAHQLKQDLMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGTAVGQPGRKPQGLLLKPNYCGLRTPEYDIPKIHDYDDTKDHINEKLRFALLAQQLRANRFNQDIKKEDDEEECDLVIDENENNKTEEANGNQNLERSKILQQRLRELHEKARNERSSRGEEDLVPVSRLLDNASQQQFKEFFKREGDDHEVGVASEEDEEGLVASGSTSEGNVSGTDENRSESETVNNAAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTNEASNNNSINYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVNQPEPKNDWESQIAYSKFAVVPNPEVHPVASQVPNSDLPFKCHLCESSFGERHQALDHIRDKHASEYDLLMSKNALDASATTPDEAPHHDEEDSDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHALNSNFEQDTTHSDEDGNNPEMPIAQEEHAKDSTQRVDKMDESDTQEGGGDLISNLLGLRDRTIIDKVLDASADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196640;
90% Identity: -
80% Identity: -