Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: Rreb1
Assembly: GCA_963920685.1
Location: OY987326.1:170377207-170381989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.8e-06 0.0012 22.1 1.3 1 23 56 78 56 78 0.99

2 16 0.0002 0.065 16.7 1.2 1 23 91 113 91 113 0.98

3 16 2.1e-05 0.0068 19.8 4.1 1 23 119 141 119 141 0.98

4 16 0.29 96 6.7 0.3 1 23 203 227 203 227 0.91

5 16 0.32 1e+02 6.6 1.0 2 23 233 255 233 255 0.95

6 16 0.07 23 8.7 0.7 1 21 301 321 301 322 0.93

7 16 0.12 39 7.9 0.1 1 23 453 475 453 475 0.96

8 16 5.7e-05 0.019 18.4 0.8 1 23 484 506 484 506 0.98

9 16 0.0024 0.77 13.3 2.3 1 23 512 535 512 535 0.97

10 16 0.00082 0.27 14.8 3.0 1 23 945 968 945 968 0.97

11 16 0.00082 0.27 14.8 0.4 2 23 1184 1205 1183 1205 0.97

12 16 0.21 68 7.2 6.3 1 23 1211 1234 1211 1234 0.97

13 16 0.044 14 9.3 0.7 1 20 1264 1284 1264 1285 0.95

14 16 0.36 1.2e+02 6.5 2.8 1 23 1352 1375 1352 1375 0.96

15 16 0.021 6.8 10.3 0.2 3 23 1422 1442 1420 1442 0.94

16 16 0.012 4.1 11.0 5.9 1 23 1448 1470 1448 1470 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.8e-06	0.0012	22.1	1.3	1	23	56	78	56	78	0.99
2	16	0.0002	0.065	16.7	1.2	1	23	91	113	91	113	0.98
3	16	2.1e-05	0.0068	19.8	4.1	1	23	119	141	119	141	0.98
4	16	0.29	96	6.7	0.3	1	23	203	227	203	227	0.91
5	16	0.32	1e+02	6.6	1.0	2	23	233	255	233	255	0.95
6	16	0.07	23	8.7	0.7	1	21	301	321	301	322	0.93
7	16	0.12	39	7.9	0.1	1	23	453	475	453	475	0.96
8	16	5.7e-05	0.019	18.4	0.8	1	23	484	506	484	506	0.98
9	16	0.0024	0.77	13.3	2.3	1	23	512	535	512	535	0.97
10	16	0.00082	0.27	14.8	3.0	1	23	945	968	945	968	0.97
11	16	0.00082	0.27	14.8	0.4	2	23	1184	1205	1183	1205	0.97
12	16	0.21	68	7.2	6.3	1	23	1211	1234	1211	1234	0.97
13	16	0.044	14	9.3	0.7	1	20	1264	1284	1264	1285	0.95
14	16	0.36	1.2e+02	6.5	2.8	1	23	1352	1375	1352	1375	0.96
15	16	0.021	6.8	10.3	0.2	3	23	1422	1442	1420	1442	0.94
16	16	0.012	4.1	11.0	5.9	1	23	1448	1470	1448	1470	0.98

Sequence Information

Coding Sequence: ATGGAAGAACCGCTGGAAACGAACCACATAACCAAAGAAACATTAGTCAACCAAAGCAGTCGTAGTGATTCGGGTATTTTCTCTGCCACCGCCAATACAACTATCGACCAATCTACTACTTGTGATAGTGACAATCGAAGTGACTGCAGTTCCCCAGAACGAAAATACGTCTGTCCGATCTGCGACAAGATGCTTACGTCGCAACACAACTTTACTTTGCACATTCGATCTCATAACAACGAAGGTGAAGACATCGATAACGAAAAAGGCTTTACTTGTAGGATCTGCCATAAAGTGCTCAGTTCAAGCTCTAGTTTAGATCGCCACGTGTTAGTGCACAGTGGCGAACGACCATTCAACTGCAAGTATTGCGGTGATACTTTTACAACCAACGGTAATATGCACCGACATATGAGAACTCACTCAAATAAAGGAGAGAACTATGAGTCTGACGGAAGTACTGACAGTGGCAGTACAAGAAGCATCGAATACAATAACAATAAAGTTGATTCCAAGCATAATAATAAGAGAAAACTAGAGGCTGTCGATGAGGGCAACAATAAGAAGAGAAACCTTGTCAATGGAAGCGATGATGAGATACAGAAATTTAGGTGCCCTGTGTGTAAGCGGTATGACTTTAATTCCATTGAAAATCTTGAAACTCACTTGGAAGATAACCATCCAGAGTACCCTGCTAAGTGCAACCTCTGtaatcaaatatttctaaacaataaATTGCTCACAATCCACAAGGAAAGAGAGCATGAACCAAACATCCCCAAACAATCAGTTGTTGGATTTAAAGACCTTACATTTGTGGATTTCTCCAGTGAGAAGTTTCCTCACATTGCAAGACACGAGTGTGAAGTAAACTTACATAAAGCAGCGGGAGGGCTAAAGTTTCAATGTCAAGAGTGTTCTAAAGCCTTTCCTTGCTCAAATTCGTTGGAAATTCACGAGAGAAGCTGCTTAGAGCCACCCACCGGCTTGAATTTAAGCAAAACCAACAACGCCTCCGAGGATGAAATCAGGCGGGCGGATTTTTTCTCGAGATTAAATCTTCAAGATAACTCACCTGAGAAAAAGGTTCCTGCAACCAAACCTTTAAAAGAACCCCCTACTAAACTTAGAGAACAACTTGCTAAGGTCATGGATAATACCAAAGATTTGGCTGATATTCAGTCAATTTTATCGAATATTAATATGCAACAACTTCAATCAAAACACAATGAACTTAAGATATCTCCATCTAAACCAATAATTGAAGTTGGCAATGACTCATCGAAAACTGAACAAGAGGAAGAATCTCAAGACTCGTTTGCAATTGAGTTTCGGAAAATGAAACTTCGCGGTGAGTTCCCATGCCGATTGTGCACCGCAGTGTTCCCAAATTTGCGAGCATTGAAGGGTCATAACAGAGCTCATCTAAATGGCAATAACAATGGTACGTATTTCTGTAATATGTGTCCCCACTCGTCCATTGACAAAGCTGCTCTTATTCGCCATATGAGAACACACAATGGTGATCGCCCATATGAATGTGCTCTTTGCAACTATGCTTTTACAACTAAGGCTAATTGCGAAAGGCACTTGCGTAATAGACATTCCAAAACCACCAGGGAAGAGGTTAAAAAATCTATTATATATCATCCCTCTGAAGATCCGACCAACGATGAGCTTAATAAATTGAATAATAAGGATGATAACAAGAAATTTAGTCTCAGTTCGTCTGTAGAGTCTAACGATTTGAGTCCTGAAAAAGTTCACTGTTCTACACCAAAAACACCAACAGTTAAGGCCgatttaaagttttcttcttcACCGGCGCTGATTCCCGACCTGCAGGCTCTAAAACCTACTAAAGTATTTCCCAACATCGATTTTCTTCGTAACGATAACATTAAAGCCCTTAAAGAAAACAGATTTTTAAACGGGGTACCTCCATTTTTTTCTCAACCTTTTAATCTTGCCACCAGAGCGCCTGCTACCGTTCCAGAACCTGAGAGTATGCCATCAAATATACAAGTAAAACCTTTTGAAACACTTAAAGAAAATATAAGCTCTTATGAGGATCATTCTGATGATGATTATTATGAGGACGAGGAGGAGCAACCACCAATGGATGTGGCACTTGACTTAAGCAAGAAAAAAATGGATGAAGACAAGAAACGTTTAGAGGAAGAAGAACCGCAAGACTTGACAAAGAAATTTTGTACTTCTCCTGTTATTCCAAGAACGGTTCCTAATGTCGGTGAAATATTTGCTCAACAATTACTTAAATCCCAGCCAAAAATTGATCCTGCGGCTCTGTATGCAACTCAACTAGCCAATATGTACCGTAATAGTTTTGGAGGATGGCCCGGCTTTCCTGTCAACCCTTTGCTTTTCCAGGCGCTACCCACACTTCCCCGTACTCCTCAAGATCTTAAAGAGCGAATGCAACGGTTTCAACTTTGCGGTGGCTCCATGATTACTGAAGAGttaaagaattttcaaaatttccagCAACAACAGAATAACCAACAATCACATCAGCAACCTTTGCTGAGTCCTGTTCCTGGGTTTAACGGTTTTAAGTCCAACTCTGAGATATCGCCACCGCTAGTAAGAGAAAATAGCTTCTCCCAACAATCTCCGAAAAAATCTGATGACGATAAACCGCTTAGTGTTAAGATCGATATCAATTATAATGATAGTGTACCCAAAATGCACAGCCCAGCTCAACAGTTGAAGCCTGACCTTATGCAATCTCCCAACTCAATCAAAATGGTTATCAAAAATGGTGTTTTAATGCCAAAACAAAAGCAACGAAGATATAGAACAGAAAGGCCTTTTACTTGTGAACATTGCTCCGCTAGGTTCACTCTCCGCTCCAATATGGAAAGACATATTAAACAACAACATCCTCAGTTCTGGTCCCAAAGACAAAGAGGTAGTGTCGGACAACCCGGTAGAAAACCTCAAGGACTATTACTTAAACCTAACTATTGCGATCTAACGATCCCAAACTACGAACTACCAAAAATATCTGATTACGATGAAGCTAAAGAACATATCCATGAAAAATTAAAGTTTGCTTTATTAGCTCAATACAGAGCGAATTCATTTAATCGAGAAATTAAAAAAGAAgacgatgaagaagaagaagactgTGACTTGGTCATCGACGAAAACGAAAACAAGACTGAAGAACCCATTAACCAAAAAATTGAGTACCAAAGAACGCAAATCTTGGAACAGAAACTTAAAGAACTCCAAGACAAAGTTAGGATTGAAAGAAACGTAAAATCTGAGGAAGATTTGGTCCCGGTATCTAGACTTTTAGACAATGCGTCTCAACAACAATTTAAGGAATTCTTTAAGAGAGAAAGCGATGACCACGAACTTGGAGTTGGCAGTGAGGAAGATGAGGAAGGTCTGGTTGCTAGCGGTAGCACTAGTGAAGAAAACATTTCCGGTACAGATGAAAATAGATCCGAATCTGAGGCTGTTACCAATGCCGTTCCAGCAAAGAAAAAATCCGCTTACTCGTTAGCCCCCAACCGTGTAAGCTGTCCATACTGCAGCCGCAAGTTTCCCTGGACTTCGTCTCTACGCCGTCATATTTTAACTCATACTGGACAGAAACCTTTTAAGTGCAGCCACTGTCCTCTCCTATTCACCACAAAATCAAATTGCGACCGCCATCTCCTACGCAAACATGGCAACTCTGCCACTACTATAGTCACCAGCGAAGCGTCGAATACCAACAGCATGAACTATTTAATGAGAAATGTTCCTGAACGACCGTTTAAGTGTTCGAACTGTCCCAGCAGTACCTTCGCAACATATTCCAATCTAAAAAAGCATATCAGTTGCAAGCATTCAACTAATGCTCAGGGCGATGACATTAAGGCTCAAGGCTACGAAGCCGGAAGTTCCGAAGATGAGAAAGTAAACCAGTCTGAGGCAAAAAACGACTGGGAGAGTCAAATTGCTTACAGCAAATTCCCTGTTGTCAATAGCCTCGAGGGACATGCTGTGAGTAGTCAAATCCCCAACTCGGATCTGCCATTTAAATGTCACTTATGTGAAAGCTCTTTTGCTGAGCGTCATCAGGCTTTGGATCATATCAGAGATAAACATGCTTCTGAGTATGATCTGCTGATGTCGAAAAATGCTTTGGACGCCAACGCTACCACCCCGGATGAGGCACCTCATCACGATGAAGAAGACACGGATATTCGTGGCAAATTTCCAGACTACTCCAACAGAAAAGTGATTTGTGCATGGTGTATGCGGAGATTCTGGTCAGCGGAAGATTTGCGGCGCCATATGCGGACTCATACTGGCGAACGACCGTTCAGTTGCGATATTTGTAGGCGCAGATTTACTCTAAAACACAGCATGCTGCGCCATAGAAAAAAGCACGCGATTAACAGCAACTTTGAGAACGATACCACGCATAGCGATGAAGATCCAGATGACAAGAAGAATTCTTCTCCAAAGGAAAGTGATAAAGCAGATGAATCTGATGCACAAGAAAGTGGTGGTGATTTGATAAGTAATCTTTTAGGGTTAAGGGATAGATCAATTATTGATAAGGTGCTCGACGCTACTGCTGATGATGCAGCAAAATTATTGGGGGTTAGAAATGGAGTTAAGGAATAA
Protein Sequence: MEEPLETNHITKETLVNQSSRSDSGIFSATANTTIDQSTTCDSDNRSDCSSPERKYVCPICDKMLTSQHNFTLHIRSHNNEGEDIDNEKGFTCRICHKVLSSSSSLDRHVLVHSGERPFNCKYCGDTFTTNGNMHRHMRTHSNKGENYESDGSTDSGSTRSIEYNNNKVDSKHNNKRKLEAVDEGNNKKRNLVNGSDDEIQKFRCPVCKRYDFNSIENLETHLEDNHPEYPAKCNLCNQIFLNNKLLTIHKEREHEPNIPKQSVVGFKDLTFVDFSSEKFPHIARHECEVNLHKAAGGLKFQCQECSKAFPCSNSLEIHERSCLEPPTGLNLSKTNNASEDEIRRADFFSRLNLQDNSPEKKVPATKPLKEPPTKLREQLAKVMDNTKDLADIQSILSNINMQQLQSKHNELKISPSKPIIEVGNDSSKTEQEEESQDSFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYFCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKTTREEVKKSIIYHPSEDPTNDELNKLNNKDDNKKFSLSSSVESNDLSPEKVHCSTPKTPTVKADLKFSSSPALIPDLQALKPTKVFPNIDFLRNDNIKALKENRFLNGVPPFFSQPFNLATRAPATVPEPESMPSNIQVKPFETLKENISSYEDHSDDDYYEDEEEQPPMDVALDLSKKKMDEDKKRLEEEEPQDLTKKFCTSPVIPRTVPNVGEIFAQQLLKSQPKIDPAALYATQLANMYRNSFGGWPGFPVNPLLFQALPTLPRTPQDLKERMQRFQLCGGSMITEELKNFQNFQQQQNNQQSHQQPLLSPVPGFNGFKSNSEISPPLVRENSFSQQSPKKSDDDKPLSVKIDINYNDSVPKMHSPAQQLKPDLMQSPNSIKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGSVGQPGRKPQGLLLKPNYCDLTIPNYELPKISDYDEAKEHIHEKLKFALLAQYRANSFNREIKKEDDEEEEDCDLVIDENENKTEEPINQKIEYQRTQILEQKLKELQDKVRIERNVKSEEDLVPVSRLLDNASQQQFKEFFKRESDDHELGVGSEEDEEGLVASGSTSEENISGTDENRSESEAVTNAVPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVTSEASNTNSMNYLMRNVPERPFKCSNCPSSTFATYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVNQSEAKNDWESQIAYSKFPVVNSLEGHAVSSQIPNSDLPFKCHLCESSFAERHQALDHIRDKHASEYDLLMSKNALDANATTPDEAPHHDEEDTDIRGKFPDYSNRKVICAWCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHAINSNFENDTTHSDEDPDDKKNSSPKESDKADESDAQESGGDLISNLLGLRDRSIIDKVLDATADDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196640;
90% Identity: -
80% Identity: -