Basic Information

Insect: Atta texana
Gene Symbol: znf423
Assembly: GCA_004480015.1
Location: QEPB01017011.1:1-16047[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00011 0.014 16.3 0.2 1 23 16 38 16 38 0.99

2 18 0.006 0.75 10.9 2.2 1 23 202 225 202 225 0.94

3 18 0.35 44 5.3 0.0 3 23 238 259 236 259 0.88

4 18 0.68 85 4.4 0.1 3 23 327 347 326 347 0.97

5 18 0.0063 0.79 10.8 0.7 3 23 364 384 362 384 0.95

6 18 0.00048 0.06 14.3 0.4 1 23 393 416 393 416 0.93

7 18 1.9 2.4e+02 3.0 0.2 1 23 421 444 421 444 0.92

8 18 0.064 7.9 7.7 2.7 2 23 525 546 524 546 0.96

9 18 0.013 1.6 9.8 0.1 1 23 551 574 551 575 0.93

10 18 2.7 3.4e+02 2.5 0.1 2 23 642 665 641 665 0.81

11 18 0.00031 0.038 14.9 1.1 2 23 681 703 680 703 0.96

12 18 0.0003 0.038 15.0 2.0 1 23 712 735 712 735 0.94

13 18 0.76 95 4.3 1.0 2 23 743 764 742 764 0.96

14 18 0.017 2.2 9.4 0.2 2 23 929 951 928 951 0.96

15 18 0.052 6.5 7.9 0.8 1 23 962 985 962 985 0.96

16 18 1.2 1.4e+02 3.7 0.1 2 23 998 1019 997 1019 0.94

17 18 0.019 2.3 9.3 0.1 2 23 1028 1050 1027 1050 0.94

18 18 0.061 7.6 7.7 2.6 1 23 1057 1080 1057 1080 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00011	0.014	16.3	0.2	1	23	16	38	16	38	0.99
2	18	0.006	0.75	10.9	2.2	1	23	202	225	202	225	0.94
3	18	0.35	44	5.3	0.0	3	23	238	259	236	259	0.88
4	18	0.68	85	4.4	0.1	3	23	327	347	326	347	0.97
5	18	0.0063	0.79	10.8	0.7	3	23	364	384	362	384	0.95
6	18	0.00048	0.06	14.3	0.4	1	23	393	416	393	416	0.93
7	18	1.9	2.4e+02	3.0	0.2	1	23	421	444	421	444	0.92
8	18	0.064	7.9	7.7	2.7	2	23	525	546	524	546	0.96
9	18	0.013	1.6	9.8	0.1	1	23	551	574	551	575	0.93
10	18	2.7	3.4e+02	2.5	0.1	2	23	642	665	641	665	0.81
11	18	0.00031	0.038	14.9	1.1	2	23	681	703	680	703	0.96
12	18	0.0003	0.038	15.0	2.0	1	23	712	735	712	735	0.94
13	18	0.76	95	4.3	1.0	2	23	743	764	742	764	0.96
14	18	0.017	2.2	9.4	0.2	2	23	929	951	928	951	0.96
15	18	0.052	6.5	7.9	0.8	1	23	962	985	962	985	0.96
16	18	1.2	1.4e+02	3.7	0.1	2	23	998	1019	997	1019	0.94
17	18	0.019	2.3	9.3	0.1	2	23	1028	1050	1027	1050	0.94
18	18	0.061	7.6	7.7	2.6	1	23	1057	1080	1057	1080	0.97

Sequence Information

Coding Sequence: GATCACCTGAAAATCCACTTGAAGACACATGACACCCAAAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTATAGCTCAGCCGCTGCCTTGACATCGCACATGCAATCTCACAAGAAGCATCACCAGTCATCGTCCTCTCAATCAGTTAGCAAGGACGTCGATTACGGTCGGAGAAGTGTCTCCTCGCACAGCACGTCATCACCACCGGTGCCGTCATCGCCGTCGCCGTCATTGAATCTCAGTCTGAATTCAAGGAATGTCCTGAAAACGTCGCAGGATACTGGTAGTACTTCTACTACACCGATTCTCAATTCGCCCCTGAAACTCGCTTGCATGTACTGCACTCGAGATTCGTTCAGCTGCATGCAGCAGCTGCAGATGCACGTACGCACAATGCATCAGGCAATCCTTAGCGGTGCGGAGAGTTTGGCACGACCACCATCGCCGAGCAGAACGTCGAACGAGCAGCAAACAATGTTCTGCTCGCGCGACAAACCCGATCGTCAGGACAGCTCAAAAGATCCACGCTCAGATCAAAAATACCCGCCCGAGGAAAGAGCCGACAAGCCAGCAAGCGAACGAGACCACTACGAGAACGCGTTTACCTGTGACCAATGTACTATGAAATTCTCCACTCTGGCCTGCTTGCGCGATCATTCACTGTCGATACACCGAGTAGACAGTGGTTTCAGCGCTACAATGGTGATATGCCCGTTGTGTGGTATTCCATGCACTTCAACAGCAGCCTATGCCGAGCACTATGTTCTCCAACACTGCGAAAATCGTCGCCCGGCACAAACAACCAGTATAGATTATAGCGAGACGAAACTGAACGGCGTTTACAACAGTACCCCAGCGAGAGATTCCAGAATGCCGAGAAACAGAGATGCTCTGGAAGCCGCTAATCTCACGAATAAATGTTCGACTCGATCATCCGCGGACGTCGCTGGTAACTATACCGCTGACACTCTATTGTGCGGCCAATGCGACGCCGCACTGAAGGATTTTGAATCCTTTCGCGAACACGTAGCTCGGCACCTGCAGGCCGACCACCGTAATCAGGAGATGTCTAACAGGCAACATTTGTGCCCCAAATGCGAGATGAATTTCCCGTCTCGCGAAGACATGCTGGCCCACTTAACCAAACATTACGTAGGACAAATCAGCAAAGAATTCGTATGCGGCGCCTGTAAAAAGTTCTACCCGCATCCAGATCAGCTTCAAAGACATTTGTTGGACGCGCATGCGCATCATTTGTACCGTTGCGCTCTGTGTCGGGACACGTTCGATTCCAAGGTAGCGATACAGGTGCATTTTGCAGTCAAGCACAGCCAAGAGTGTCGGATCTATCGATGCAGTGTATGTACGTTGTCCAACAACGAAAATTCGCCGCCGGAAACAAACGCGGCTCCCGGCGACAGCAGGAGCTTCTTCAGAAGCGAAGCTGAGATGGCGGCCCATGTGCGTAACGTGCACGCACCTCCTCCCATCGTTCCTTCCTTAACGAACAGTAGTCCTATCAGAGCAACAACAAGAAGTCCAGCTTCGACACCTAGTATTATCACAACGCGCTGCGTCTTTTGCGGGACCTGCTGCAGTTCGGAGCTTGAACTTCAGCTTCATCTGGCCAGTCATTCGGCCAGTCTTTATAGATGTCCCATCTGTAGAGAAGGTTTCGCAGTGGAGTTCCTGTTGGATCGACATGTCGCTCAGGTTCATCATCAGATAGCGCAAGATCATCAAGTGCCATCAGTTAGAAACAGAGAGAACGGACGCGTTCATCGATCGGCTAGAAATCAGGAAGAAACAAAATCTCTGAAGAGAGGCCGTTCACCAGCTTCAAGCAACAACAATTCCCTGAATCAACGTGACAATAACAATAAACGTTCAAATTATGGTAGTCAGTATGGTTCCAGTCAGCAATGCGAGCTTTGCGAACGCGGTGAATTCGCGAACGAGGCCGAGTTGCAGGCACATAAGAAATTAGCTCATACACCCCCTAAGTTGTCCAACAAGGCTTTATCTACCTTGAGCATGACGTGTGGCTATTGTGGCGAAGTTTGTCGCTCGCGAAACGAGCTGGAATCTCACACGAAGATTCAACACGCATCTAACGAGTCCAGTGGACGTCACAAATGCAATATCTGCGACGAAGTATGCTCATCCAGCGCGAATCTGGCCGAGCACAAGCTTCAGAAGCATTGCAAGATCCAATTAAGCGACACGTGTGTGGTGTGTCGTGGTTGTCTCACGTCGGAAAGTCAATTTCTGGACCACGTGCAAAGACACAGTCTGGATAATGTGGATCCGCAACAACGATTGGATAGTACGTTGCCTCATCTGCCCGCGCCATGCGTTGTATGTCGACAGACCTTGATCAGCGATTTGGAATGTCGTCTGCACGCGCGGCATCATTTACGAAAATCCTCAAATTTGCGCAATATCGGTTCCAGCCCGACTAGTCCTGGTGGTGACAAAGGTCAAAATCAAGGTTGCTGCCTCTGTTTGCGCGACTTTGCAGCCGAAGACTTTGTCAATCTACCACCCAATCCTGCCAGTACAAGCGGACAGCTGCTCAGAGTCTGTAAACCGTGTTACATGCGACACTCTCAGGGATTGCCTATTCTGAACTCGACGACCTATGAATATAGAGCTAAATATGAGACGACTTGGCTTGCGAGCAAGGATGGCCAGTGGGACGAAACTAAGGATAAGTGGGAGCACGAGAAAGGACTCAAAGTAGAGGACCGATTCAGGAACGAAGGGAACGCGGATAAGAAAAGATGCGAAAATTGCGGAGTGAAGTTTGAAGACTTCGAAGAAGCAGAGAAGCACAGGATCACCGAGCATGAAAAAGCTGTCGGCGGTGGCTCGAATACCTACACCTGCATACAGTGTCAAGTGTCATTTTCAACTGAAGCCAAGATTCAGCAACACGTGAGGAAAAAACACTTGGAAGCATCCGGAAAAGTTTCCTTGGAGGCTTTACGTTGTCACTTGTGCTTATTCGAGGCCGCCAGTCCTATGCAGCtacaaattcatttaatagagCACACTTTCGCCGGTTGTGCCGCTCTTAGTTGTTATATCTGCCAGTCGCTCTTCACAACTCCTATCGGTCTTCAGAATCATATGCTGCAAGAACATGGACTAGACGCGAGACCGTACGATTGCTCCAAGTGCACACTCAAATTCTTCTTCAGTGCGGAACTGGACCATCACGTACTGACCTTTCACCGTCCGGACTCTTCGTCAGTCGAGAGCGCTCATGAGATGAAGACTCGCGAGTCAAAAAAGCGCGATAACGATGTAACGGTGAAGGAGGAAGTAGTGCAAAGCGGTAAAGAAAAGGtggaagaggaggaagagaaggaagaggaggaagTGAACGTGGATGATCAGATGGGGCATCACGAAGAGGCTGAACGAAATGAACAGAAACTGAAGACAGAAATAAACAATGAGGCGACATCCGGCATGGCATCGTGA
Protein Sequence: DHLKIHLKTHDTQRPYQCTACTRGYSSAAALTSHMQSHKKHHQSSSSQSVSKDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNSRNVLKTSQDTGSTSTTPILNSPLKLACMYCTRDSFSCMQQLQMHVRTMHQAILSGAESLARPPSPSRTSNEQQTMFCSRDKPDRQDSSKDPRSDQKYPPEERADKPASERDHYENAFTCDQCTMKFSTLACLRDHSLSIHRVDSGFSATMVICPLCGIPCTSTAAYAEHYVLQHCENRRPAQTTSIDYSETKLNGVYNSTPARDSRMPRNRDALEAANLTNKCSTRSSADVAGNYTADTLLCGQCDAALKDFESFREHVARHLQADHRNQEMSNRQHLCPKCEMNFPSREDMLAHLTKHYVGQISKEFVCGACKKFYPHPDQLQRHLLDAHAHHLYRCALCRDTFDSKVAIQVHFAVKHSQECRIYRCSVCTLSNNENSPPETNAAPGDSRSFFRSEAEMAAHVRNVHAPPPIVPSLTNSSPIRATTRSPASTPSIITTRCVFCGTCCSSELELQLHLASHSASLYRCPICREGFAVEFLLDRHVAQVHHQIAQDHQVPSVRNRENGRVHRSARNQEETKSLKRGRSPASSNNNSLNQRDNNNKRSNYGSQYGSSQQCELCERGEFANEAELQAHKKLAHTPPKLSNKALSTLSMTCGYCGEVCRSRNELESHTKIQHASNESSGRHKCNICDEVCSSSANLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLDNVDPQQRLDSTLPHLPAPCVVCRQTLISDLECRLHARHHLRKSSNLRNIGSSPTSPGGDKGQNQGCCLCLRDFAAEDFVNLPPNPASTSGQLLRVCKPCYMRHSQGLPILNSTTYEYRAKYETTWLASKDGQWDETKDKWEHEKGLKVEDRFRNEGNADKKRCENCGVKFEDFEEAEKHRITEHEKAVGGGSNTYTCIQCQVSFSTEAKIQQHVRKKHLEASGKVSLEALRCHLCLFEAASPMQLQIHLIEHTFAGCAALSCYICQSLFTTPIGLQNHMLQEHGLDARPYDCSKCTLKFFFSAELDHHVLTFHRPDSSSVESAHEMKTRESKKRDNDVTVKEEVVQSGKEKVEEEEEKEEEEVNVDDQMGHHEEAERNEQKLKTEINNEATSGMAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00016902; iTF_01477131; iTF_01261994; iTF_01477832; iTF_00016224; iTF_00014926; iTF_00417812; iTF_01476458; iTF_00182165; iTF_00181514; iTF_00015582;
80% Identity: -