Basic Information

Insect: Trachymyrmex septentrionalis
Gene Symbol: znf423_1
Assembly: GCA_001594115.1
Location: NW:78516-137393[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.057 3.6 7.5 4.9 1 23 53 75 53 75 0.98

2 20 1.7e-06 0.00011 21.7 2.3 1 23 81 103 81 103 0.99

3 20 9.8e-05 0.0062 16.2 0.2 1 23 109 131 109 131 0.99

4 20 0.01 0.63 9.9 3.1 1 23 295 318 295 318 0.94

5 20 0.31 20 5.2 0.0 3 23 331 352 329 352 0.88

6 20 0.6 38 4.3 0.1 3 23 420 440 419 440 0.97

7 20 0.0026 0.16 11.7 0.5 3 23 457 477 455 477 0.95

8 20 0.00026 0.016 14.9 0.7 1 23 486 509 486 509 0.93

9 20 1.7 1.1e+02 2.9 0.2 1 23 514 537 514 537 0.92

10 20 0.13 8.1 6.4 2.8 2 23 618 639 617 639 0.96

11 20 0.011 0.72 9.7 0.1 1 23 644 667 644 668 0.93

12 20 2.4 1.5e+02 2.4 0.1 2 23 732 755 731 755 0.81

13 20 0.00012 0.0075 16.0 1.0 2 23 771 793 770 793 0.96

14 20 0.00056 0.035 13.8 1.3 1 23 802 825 802 825 0.94

15 20 0.67 42 4.1 1.0 2 23 833 854 832 854 0.96

16 20 0.028 1.8 8.5 0.1 2 23 1019 1041 1018 1041 0.91

17 20 0.046 2.9 7.8 0.8 1 23 1052 1075 1052 1075 0.96

18 20 1 64 3.6 0.1 2 23 1088 1109 1087 1109 0.94

19 20 0.016 1 9.2 0.1 2 23 1118 1140 1117 1140 0.94

20 20 0.054 3.4 7.6 2.6 1 23 1147 1170 1147 1170 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.057	3.6	7.5	4.9	1	23	53	75	53	75	0.98
2	20	1.7e-06	0.00011	21.7	2.3	1	23	81	103	81	103	0.99
3	20	9.8e-05	0.0062	16.2	0.2	1	23	109	131	109	131	0.99
4	20	0.01	0.63	9.9	3.1	1	23	295	318	295	318	0.94
5	20	0.31	20	5.2	0.0	3	23	331	352	329	352	0.88
6	20	0.6	38	4.3	0.1	3	23	420	440	419	440	0.97
7	20	0.0026	0.16	11.7	0.5	3	23	457	477	455	477	0.95
8	20	0.00026	0.016	14.9	0.7	1	23	486	509	486	509	0.93
9	20	1.7	1.1e+02	2.9	0.2	1	23	514	537	514	537	0.92
10	20	0.13	8.1	6.4	2.8	2	23	618	639	617	639	0.96
11	20	0.011	0.72	9.7	0.1	1	23	644	667	644	668	0.93
12	20	2.4	1.5e+02	2.4	0.1	2	23	732	755	731	755	0.81
13	20	0.00012	0.0075	16.0	1.0	2	23	771	793	770	793	0.96
14	20	0.00056	0.035	13.8	1.3	1	23	802	825	802	825	0.94
15	20	0.67	42	4.1	1.0	2	23	833	854	832	854	0.96
16	20	0.028	1.8	8.5	0.1	2	23	1019	1041	1018	1041	0.91
17	20	0.046	2.9	7.8	0.8	1	23	1052	1075	1052	1075	0.96
18	20	1	64	3.6	0.1	2	23	1088	1109	1087	1109	0.94
19	20	0.016	1	9.2	0.1	2	23	1118	1140	1117	1140	0.94
20	20	0.054	3.4	7.6	2.6	1	23	1147	1170	1147	1170	0.97

Sequence Information

Coding Sequence: ATGTCTTATTTAACAACGTGTGGCGACTCGCCACCAGAGGTCCAATGGGACTCACGCGAATCCGAGCGAGCCCCGTTCGACCTCTGGTGGCGAGTCACCACAAAcgatttattaacaaatatgcAAGGTTGGGAAaGTCACGGCGATCAGATGCCATATCGATGCAGTTGGTGCAACAGACTATTCAAACACAAGCGCAGCCGCGATCGTCACGTGAAGTTACACACCGGAGACAGGCGATACCGCTGCTCGAAATGTGAAGCCGCCTTCTCCAGAAGCGATCACCTGAAAATCCACTTGAAGACACACGACACTCAAAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTACAGCTCAGCTGCTGCCTTGACATCACACATGCAATCTCACAAGAAACATCACCAGTCATCGTCCTCTCAATCAACTGGCAAGGACGTCGATTACGGTAGGAGAAGCGTCTCCTCGCACAGCACATCATCACCGCCGGtgccgtcgtcgccgtcgccgtcgttgAATCTCAGTCTGAATTCGAGGAATGTCCTGAAGACGTCGCAGGGTACTGGTAGTACTTCTACTACACCGATTCTCAACTCGCCCCTGAAACTCGCTTGCATGTACTGCACCCGAGATTCATTCAGCTGCATGCAGCAGTTGCAGATGCACGTACGCACAATGCATCAGGCAATCCTTAGCGGCGCGGAGAGTTTGGCGCGACCACCATCGCCGAACAGAACGCCGAACGAGCAACAAGCAGTGTTCTGCTCGCGCGATAAGCCCGATCGTCAGGACAGCTCAAAAGACCCACGCTCAGATCGGAAATACCCGCCCGAGGAAAGAGTCGACAGGCCTGCAGGCGAACGAGATCACTATGAGAACGCATTTACTTGCGACCAATGTACTATGAAATTCTCTACTCTGACCTGCTTGCGCGATCATTCGCTATCGATACACCGAGTGGACAGTGGTTTCAGCGCGACAATGGTGATATGCCCGTTGTGTGGTATTCCGTGCACTTCAACAGCAGCCTATGCCGAGCACTATGTTCTCCAACACTGCGAAAATCGTCGGCCGACACAGACAACCAGTATAGATTATAGCGAGACGAAACTGAATGGCGTTTACAACAGTACCCCAGCGAGAGACTCCAGAATGCCGAGAAGCAGAGATGCCTCAGAAGCCGCTGATCTCACGAATAAACGTCCGACCCGGCCATCCGCGGACGTCGCTGGTAGCTATACCGCTGACACTCTGTTGTGCGGTCAATGCGACGCCGCGCTGAAGGATTTCGAATCCTTTCGCGAACACGTGGCTCGGCACCTGCAGGCCGACCATCGTAATCAGGAGATGTCCAACAGGCAACATTTGTGCCCCAAGTGCGAGACGATTTTCCCGTCTCGCGATGACATGCTGGCCCACCTGACCAAGCATTATGTAGGACAGATCAGCAAAGAATTCGTATGCAGTGCCTGTAAAAAGTTCTACCCGCATCCAGATCAACTTCAAAGACACTTACTGGACGCTCATGCGCATCATCTGTACCGTTGCGCTCTGTGCCGGGACACGTTCGACTCCAAGGTAGCGATACAAGTGCACTTTGCAGTTAAGCACAGCCAAGAGTGCCGGATATATCGATGTAGTGTATGTACGTTGTCCAACAACGAAAACTCGCCACCGGGAACAAACGCGGCTCCCAGCGATAGCAGGAACTTCTTCAGAAGCGAAGCTGAGATGGCGGCCCATGTGCGTAACGTGCACGCGCCTCCTCCTGTCATTCCTTCCTTAACGAACAGTAGTCCTGTTAGAGCAACAACAAGGAGTCCAGCTTCGACGCCTGGTATTATCACAACGCGCTGCGTCTTTTGCGGGACCTGCTGCAATTCGGAGCTTGAACTTCAGCTTCACCTAGCCAGTCACTCGACCAGTCTTTATAGATGTCCCATCTGCAGAGAAGGTTTCGCGGTGGAGTTCCTGTTGGATCGACATGTCGCTCAGGTTCATCATCAGACAGCGCAAGATCACCAAGTGCCGTCAGTTAGAAACAGGGAGAACGGACGCGTTCATCGACCGGCAAGAAATCAGGAAGAAACAAAATCTCTGAAGAGAGGCCGTTCACCAGCTTCAAGTAACAACAACTCCTTGAATCAGCGCGACAATAACAATAAACGTTCAAATTATGGTACTTCTGGTCAGCAATGCGAGCTCTGCGAACGCGGTGAATTCGCGAACGAGGCCGAGCTGCAGGCACATAAGAAACTAGCTCACACGCCCCCCAAGTTATCCAATAAGGCTCTATCCTCCTTGAGCATGACGTGTGGCTATTGTGGCGAAGTTTGTCGCTCGCGAAACGAGTTGGAATCTCACACGAGGATTCAACACGCATCTAATGAGTCCAGTGGACGTCACAAATGCAATATCTGCGACGAAGTATGCCCATCCAGCGCGAATCTGGCCGAGCACAAGCTCCAGAAGCATTGCAAAATCCAGCTGAGCGATACGTGCGTGGTGTGTCGTGGTTGTCTCACGTCGGAAAGTCAGTTTTTGGACCACGTGCAAAGACACAGCCTGGATAATGTGGATCCGCAACAACGACTGGACAGTACGTTGCCTCATCTGCCCGCACCATGCGTTGTATGTCGACAGACCTTGATAAGCGATTTGGAATGTCGTCTGCACGCGCGGCATCATCTACGAACGTCCTCAAGTTTGCGCAGTACCGGTTCCAGCCCGACTAGTCCTGGTGGTGACAAAGGTCAAACTCAAGGATGCTGCCTCTGCTTGCGTGACTTTGCAGCCGAGGACTTTGTTAATCTACCACCCAATCCTGCCAGTACAAGCGGACAGCTGCTCAGAGTCTGTAAACCGTGTTACATACGACACTCTCAGGGACTGCCTATTCTGAACTCGACGACCTACGAGCATAGGGCTAAATATGAGACGACTTGGCTCGCGAGCAAGGACAATCAGTGGGATGAAACTAAAGATAAGTGGGAGCACGAGAGAGGACTAAAAGTAGAGGACCGATCCAGAAACGAAGGGAACATGAATAAGAAAAGGTGCGAAGATTGCGGAGTGAAGTTTGAAGACTTTGAAGAGGCAGAGAAGCACAGGATCGCcgaacatgaaaaaattatcggCGGTGGCTCGAATACCTACACCTGCATACAGTGTCAAGTGTCATTTTCAACTGAAGCCAAGATTCAGCAACACGTGAGGAAAAAACACTTGGAGGCATCCGGAAAAGCTTCCTTGGAGGCTTTACGTTGTCACTTGTGCTTATTCGAGGCCGCCAGTCCTATGCAGCTACAAATTCACTTAATAGAGCATACTTTCGCCGGTTGTGCCGCTCTTAGCTGTTATATCTGTCAGTCGCTCTTCACAACTCCTATCGGTCTTCAGAATCATATGCTGCAAGAACACGGACTAGACGCGAGACCGTATGATTGCTCCAAGTGCACACTCAAATTCTTCTTCAGCGCGGAACTGGACCACCACGTACTGACCTTTCACCGACCGGGAGAAGAGATCCACTCTTCGTCAGTCGAGAGCGCTCATGAGACGAAAACTCGCGAGTCAAAGAAGCGAATCGAAGACGATGTAACGGTGAAGGAGGAAGTAGTGCAAGGCGGTAAAGAAAAGGAgcaagaggaggaggaggaggaggaggaagtgAACGTGGATGATCAGATGGGGTATCACGAAGAGGCTGAACGAAATGAACAGAAACTGAAGACAGAAGTAAACAACGAGGCGACATCCGGCAGGATGGAATCATGA
Protein Sequence: MSYLTTCGDSPPEVQWDSRESERAPFDLWWRVTTNDLLTNMQGWESHGDQMPYRCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSSAAALTSHMQSHKKHHQSSSSQSTGKDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNSRNVLKTSQGTGSTSTTPILNSPLKLACMYCTRDSFSCMQQLQMHVRTMHQAILSGAESLARPPSPNRTPNEQQAVFCSRDKPDRQDSSKDPRSDRKYPPEERVDRPAGERDHYENAFTCDQCTMKFSTLTCLRDHSLSIHRVDSGFSATMVICPLCGIPCTSTAAYAEHYVLQHCENRRPTQTTSIDYSETKLNGVYNSTPARDSRMPRSRDASEAADLTNKRPTRPSADVAGSYTADTLLCGQCDAALKDFESFREHVARHLQADHRNQEMSNRQHLCPKCETIFPSRDDMLAHLTKHYVGQISKEFVCSACKKFYPHPDQLQRHLLDAHAHHLYRCALCRDTFDSKVAIQVHFAVKHSQECRIYRCSVCTLSNNENSPPGTNAAPSDSRNFFRSEAEMAAHVRNVHAPPPVIPSLTNSSPVRATTRSPASTPGIITTRCVFCGTCCNSELELQLHLASHSTSLYRCPICREGFAVEFLLDRHVAQVHHQTAQDHQVPSVRNRENGRVHRPARNQEETKSLKRGRSPASSNNNSLNQRDNNNKRSNYGTSGQQCELCERGEFANEAELQAHKKLAHTPPKLSNKALSSLSMTCGYCGEVCRSRNELESHTRIQHASNESSGRHKCNICDEVCPSSANLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLDNVDPQQRLDSTLPHLPAPCVVCRQTLISDLECRLHARHHLRTSSSLRSTGSSPTSPGGDKGQTQGCCLCLRDFAAEDFVNLPPNPASTSGQLLRVCKPCYIRHSQGLPILNSTTYEHRAKYETTWLASKDNQWDETKDKWEHERGLKVEDRSRNEGNMNKKRCEDCGVKFEDFEEAEKHRIAEHEKIIGGGSNTYTCIQCQVSFSTEAKIQQHVRKKHLEASGKASLEALRCHLCLFEAASPMQLQIHLIEHTFAGCAALSCYICQSLFTTPIGLQNHMLQEHGLDARPYDCSKCTLKFFFSAELDHHVLTFHRPGEEIHSSSVESAHETKTRESKKRIEDDVTVKEEVVQGGKEKEQEEEEEEEEVNVDDQMGYHEEAERNEQKLKTEVNNEATSGRMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00182841;
80% Identity: -