Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: znf423
Assembly: GCA_000204515.1
Location: NW:381463-459106[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6.7e-06 0.0004 20.0 1.5 1 23 92 114 92 114 0.98

2 21 0.062 3.8 7.5 4.9 1 23 120 142 120 142 0.98

3 21 1.9e-06 0.00011 21.7 2.3 1 23 148 170 148 170 0.99

4 21 0.00011 0.0065 16.2 0.2 1 23 176 198 176 198 0.99

5 21 0.0058 0.35 10.7 2.2 1 23 362 385 362 385 0.94

6 21 0.34 21 5.1 0.0 3 23 398 419 396 419 0.88

7 21 0.66 40 4.2 0.1 3 23 465 485 464 485 0.97

8 21 0.0021 0.12 12.1 0.4 3 23 502 522 500 522 0.95

9 21 0.00047 0.028 14.2 0.4 1 23 531 554 531 554 0.93

10 21 1.8 1.1e+02 2.9 0.2 1 23 559 582 559 582 0.92

11 21 0.063 3.8 7.5 2.0 2 23 663 684 662 684 0.96

12 21 0.013 0.8 9.6 0.3 1 23 689 712 689 713 0.93

13 21 2.6 1.6e+02 2.3 0.1 2 23 777 800 776 800 0.81

14 21 0.00013 0.0078 15.9 1.0 2 23 816 838 815 838 0.96

15 21 0.0078 0.47 10.3 0.9 1 23 847 870 847 870 0.93

16 21 0.74 44 4.1 1.0 2 23 878 899 877 899 0.96

17 21 0.031 1.9 8.4 0.1 2 23 1064 1086 1063 1086 0.91

18 21 0.05 3 7.8 0.8 1 23 1096 1119 1096 1119 0.96

19 21 1.1 67 3.5 0.1 2 23 1132 1153 1131 1153 0.94

20 21 0.018 1.1 9.2 0.1 2 23 1162 1184 1161 1184 0.94

21 21 0.2 12 5.9 4.5 1 23 1191 1214 1191 1215 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6.7e-06	0.0004	20.0	1.5	1	23	92	114	92	114	0.98
2	21	0.062	3.8	7.5	4.9	1	23	120	142	120	142	0.98
3	21	1.9e-06	0.00011	21.7	2.3	1	23	148	170	148	170	0.99
4	21	0.00011	0.0065	16.2	0.2	1	23	176	198	176	198	0.99
5	21	0.0058	0.35	10.7	2.2	1	23	362	385	362	385	0.94
6	21	0.34	21	5.1	0.0	3	23	398	419	396	419	0.88
7	21	0.66	40	4.2	0.1	3	23	465	485	464	485	0.97
8	21	0.0021	0.12	12.1	0.4	3	23	502	522	500	522	0.95
9	21	0.00047	0.028	14.2	0.4	1	23	531	554	531	554	0.93
10	21	1.8	1.1e+02	2.9	0.2	1	23	559	582	559	582	0.92
11	21	0.063	3.8	7.5	2.0	2	23	663	684	662	684	0.96
12	21	0.013	0.8	9.6	0.3	1	23	689	712	689	713	0.93
13	21	2.6	1.6e+02	2.3	0.1	2	23	777	800	776	800	0.81
14	21	0.00013	0.0078	15.9	1.0	2	23	816	838	815	838	0.96
15	21	0.0078	0.47	10.3	0.9	1	23	847	870	847	870	0.93
16	21	0.74	44	4.1	1.0	2	23	878	899	877	899	0.96
17	21	0.031	1.9	8.4	0.1	2	23	1064	1086	1063	1086	0.91
18	21	0.05	3	7.8	0.8	1	23	1096	1119	1096	1119	0.96
19	21	1.1	67	3.5	0.1	2	23	1132	1153	1131	1153	0.94
20	21	0.018	1.1	9.2	0.1	2	23	1162	1184	1161	1184	0.94
21	21	0.2	12	5.9	4.5	1	23	1191	1214	1191	1215	0.96

Sequence Information

Coding Sequence: ATGCTTTTCAAAGGCAACAGTTCACGGCTGGAATTGTTGATTGGAAAAATCCACGCACACAAGGAACCGTCACAGGATGAGCAACACAAATCTAAAGAGGCCCTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGGCCCAACTCGCGTCGTGGCGGCGAGACGCCGTCCTCTTGCGCGACGCCGACATCGGCCAGCTTCCCGTCGGAACCCGAGGTTGATGTCGACGTCAGCGTCAATCCCGACGGCAATAACCCCGCTGCTCCGTATCCATGTCAATTCTGCGACAGAACGTTCCCGCGGCTCAGCTACCTGAAAAAACATGAACAGAGTCACGGTGATCAGATGCCATATCGATGCAGTTGGTGCAACAGACTATTCAAACACAAGCGCAGCCGTGATCGTCACGTGAAGTTACACACCGGAGACAGGCGATACCGCTGCTCGAAATGTGAAGCCGCCTTCTCCAGAAGCGATCACCTGAAAATCCACTTGAAGACACACGACACCCAAAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTACAGTTCAGCCGCTGCCTTGACATCGCACATGCAATCTCACAAGAAGCATCACCAGTCATCGTCCTCTCAATCAGCTGGCAAGGACGTCGATTACGGTCGGAGAAGCGTCTCCTCGCACAGCACGTCATCACCGCCGGtgccgtcgtcgccgtcgccgtcgttgAATCTCAGTCTGAATTCGAGGAATGTCCTGAAGACGTCGCAGGGTACTGGTAGTACTTCTACTACACCGATTCTCAACTCACCCCTGAAACTCGCTTGCATGTACTGCACCCGAGATTCGTTCAGCTGCATGCAGCAGCTGCAAATACACGTACGCACGATGCATCAGGCAATCCTTAGCGGCGCGGAGAGTTTAGCGCGACCATCATCGCCGAGCAGAACATCAAATGAGCAACAAGCAGTATTCTGCTCGCGCGACAAGCCTGATCGTAAGGACAGCTCAAAAGACCCACGCTCAGATCGAAAATACCCATCCGAGGAAAGAGCCGACAGGCCTGCAGGCGAACGAGACCACTACGAGAACGCGTTTACCTGCGACCAGTGTACTATGAAATTCTCCACTCTGGCCTGCTTGCGTGATCATTCGTTGTCGATACACCGGATGGACAGTGGTTTCAGCGCGACAATGGTGATATGTCCATTGTGTGGTATTCCGTGCACTTCAACAGCAGCCTATGCCGAGCACTATGTTCTTCAACACTGCGAAAATCGTCGCCCGCAGACAACCAGTATAGATTATAACGAGACGAAACTGAACGGCGTTTACAACAGTACCCCACGTCCGACCCGTCCATCCGCGGACGCCGCTGGTAGCTATACCGCTGACACTCTGTTGTGCGGCCAATGCGACGCCGCGCTGAAGGATTTCGAATCCTTTCGCGAACACGTGGCTCGGCACCTGCAGGCCGACCACCGTAATCAGGAGATGTCCAACAGGCAACATTTGTGCCCCAAATGCGAGATGGTTTTCCCATCTCGCGAAGACATGCTGGCTCACCTAACTAAGCATTACGTAGGACAGATCAGCAAAGAATTCGTATGCGGCgcctgtaaaaagttttaccCGCATCCAGATCAGCTTCAAAGACATTTGTTGGACGCTCATGCACATCATTTGTACCGTTGCGCTCTATGCCGGGACACGTTCGACTCCAAGGTAGCGATACAAGTGCACTTTGCAGTCAAGCACAGCCAAGAGTGCCGGATCTATCGATGTAGTGTATGTACGTTGTCCAACAACGAAAACTCACCACCGGGAACAAACGCGGCTCCCGGCGATAGCAGGAGCTTCTTCAGAAGCGAAGCCGAGATGGCGGCTCATGTGCGTAACGTGCACGCGCCTCCTCCGGTCGTTCCTTCCTTAACGAACAGTAGTCCTATCAGAGCAACAACGAGGAGCCCAGCTTCGACGCCTGGTATTATCACAACGCGCTGCGTCTTTTGCGGAATCTGCTGCAGTTCGGAGCTTGAACTTCAGCTTCATCTGGCCAGTCACTCGGCCAGTCTTTATAGATGTCCCATCTGTAGAGAAGGTTTCGCGGTGGAGTTCCTGTTGGATCGACATGTCACTCAGGTTCATCATCAGACAGCGCAAGATCACCAAGTGCCGTCAGTTAGAAACAGGGAGAACGGACGCGTTCATCGACCGACTAGAAATCAAGAAGAAACAAAATCTCTGAAGAGAGGCCGTTCACCAGCTTCAAGCAACAACAACTCCCTGAATCAGCGCGACAATAACAACAAACGTTCAAATTATGGTACTTCCAGTCAGCAATGTGAGCTCTGCGAACGCGGTGAATTTGCGAACGAGGCCGAGCTGCAGGCACATAAGAAATTAGCTCACACGCCCCTTAAGCTATCCAACAAGGCTCTATCTACTTTGAGCATGACTTGTGGCTATTGTGGCGAAGTTTGTCGCTCGCGAAACGAGCTGGAATCTCACACGAGGATTCAACATGCATCTAATGAGTCCAGTGGACGTCACAAATGCAATATCTGCGACGAAGTATGCCCATCTGGCGCGAATCTGGCGGAGCACAAGCTCCAGAAGCATTGCAAGATCCAGCTGAGCGACACGTGCGTGGTGTGTCGTGGTTGTCTCACATCAGAAAGTCAGTTTCTGGACCACGTGCAAAGACACAGTCTGGATAATGTGGATCCGCAACAACGACTGGACAGTACGTTGCCTCATCTGCCCGCGCCATGCGTTGTATGTCGACAGACCTTGATCAGCGATTTGGAATGTCGTTTGCACGCGCGGCATCATCTACGAACGTCCTCAAGTTTGCGCAGTACCGGTTCCAGCCCGACTAGTCCTGGTGGTGACAAAGGTCAAAATCAAGGTTGCTGCCTCTGCTTGCGCGACTTTGCAGCCGAGGACTTCGTCAATCTACCACCCAATCCTGCCAGTACAAGCGGACAGCTGCTCAGAGTCTGTAAACCGTGTTACATGCGACATTCTCAGGGATTGCCTATTCTAAACTCGACGACCTATGAGCATAGGGCTAAATATGAGACGACTTGGCTCGCGAACAAGGACGGCCAGTGGGACGAAACTAAAGATAAGTGGGAGCACGAGAGAGGACTCAAAATAGAGGACCGATCCAGGAACGAAGGGAATACGAATAAGAAAAGGTGTGAAGATTGCGGAGTGAAGTTTGAAGACTTCGAAGAGGCAGAGAAGCACAGGATCGCTGAGCATGAAAAAGCTGTCGGTGGCTCGAATACCTATACCTGCATACAATGTCAAGTATCATTTTCAACTGAAGCCAAGATTCAGCAACACGTGAGGAAAAAACACTTGGAGGCATCCGGAAAAGCTTCCTTGGAGGCTTTACGTTGTCATTTGTGCTTATTCGAGGCCGCCAGTCCTATGCAGCTACAAATTCACTTAATAGAACACACTTTCGCCGGTTGTGCCGCTCTTAGCTGTTATATCTGCCAGTCGCTCTTCACAACTCCTATAGGTCTTCAGAATCATATGCTGCAAGAACACGGACTAGACGCGAGACCGTACGATTGCTCCAAGTGCACACTCAAATTCTTCTTCAGCGCGGAACTGGACCACCACGTACTGACCTTTCATCATCCGGGAGAAGAGATCCACTCTTCGTCAGTCGAGAGCGCTCATGAGACGAAGACTCGCGAGTCGAAGAAGCGCGATGATGATGTAACGGTGAAGGAGGAAGTAGTGCAAAGTGGTAAAGAAAAGAacgaagaggaggaggaggaagtgAACGTGGATGATCAGATGGGACATCACGAAGAGGCTGAACGAAATGAACAGAAACTGAAGACAGAAATAAACAACGAAGCGACATCCGGCAGGATGGAATCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIHAHKEPSQDEQHKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDVDVSVNPDGNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSSAAALTSHMQSHKKHHQSSSSQSAGKDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNSRNVLKTSQGTGSTSTTPILNSPLKLACMYCTRDSFSCMQQLQIHVRTMHQAILSGAESLARPSSPSRTSNEQQAVFCSRDKPDRKDSSKDPRSDRKYPSEERADRPAGERDHYENAFTCDQCTMKFSTLACLRDHSLSIHRMDSGFSATMVICPLCGIPCTSTAAYAEHYVLQHCENRRPQTTSIDYNETKLNGVYNSTPRPTRPSADAAGSYTADTLLCGQCDAALKDFESFREHVARHLQADHRNQEMSNRQHLCPKCEMVFPSREDMLAHLTKHYVGQISKEFVCGACKKFYPHPDQLQRHLLDAHAHHLYRCALCRDTFDSKVAIQVHFAVKHSQECRIYRCSVCTLSNNENSPPGTNAAPGDSRSFFRSEAEMAAHVRNVHAPPPVVPSLTNSSPIRATTRSPASTPGIITTRCVFCGICCSSELELQLHLASHSASLYRCPICREGFAVEFLLDRHVTQVHHQTAQDHQVPSVRNRENGRVHRPTRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRSNYGTSSQQCELCERGEFANEAELQAHKKLAHTPLKLSNKALSTLSMTCGYCGEVCRSRNELESHTRIQHASNESSGRHKCNICDEVCPSGANLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLDNVDPQQRLDSTLPHLPAPCVVCRQTLISDLECRLHARHHLRTSSSLRSTGSSPTSPGGDKGQNQGCCLCLRDFAAEDFVNLPPNPASTSGQLLRVCKPCYMRHSQGLPILNSTTYEHRAKYETTWLANKDGQWDETKDKWEHERGLKIEDRSRNEGNTNKKRCEDCGVKFEDFEEAEKHRIAEHEKAVGGSNTYTCIQCQVSFSTEAKIQQHVRKKHLEASGKASLEALRCHLCLFEAASPMQLQIHLIEHTFAGCAALSCYICQSLFTTPIGLQNHMLQEHGLDARPYDCSKCTLKFFFSAELDHHVLTFHHPGEEIHSSSVESAHETKTRESKKRDDDVTVKEEVVQSGKEKNEEEEEEVNVDDQMGHHEEAERNEQKLKTEINNEATSGRMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00182841;
80% Identity: -