Basic Information

Insect: Atta colombica
Gene Symbol: pnr
Assembly: GCA_001594045.1
Location: NW:168188-186861[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.8 6.9e+03 -4.1 0.1 8 12 241 245 239 248 0.81

2 2 9.7e-17 1.4e-13 49.4 5.1 1 35 424 457 424 458 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.8	6.9e+03	-4.1	0.1	8	12	241	245	239	248	0.81
2	2	9.7e-17	1.4e-13	49.4	5.1	1	35	424	457	424	458	0.98

Sequence Information

Coding Sequence: ATGTTTGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGATGGTGTCAAGTATTCCATATTCAGGGAGGCGGGCACTCAACAGAATTTCGCCGAGAAGATATCGGCGTGTCTGTCAATCACAgtAAAAGATGATGATTCCTTACCGCCGATTATTTGCCAGCAATGCGTATGTAAGTTGGATATGCTGGACAACTTTCGCGAAATATCGCAAAAATCTGATGTCTTACTCAAACAGTACCTGGATTATACCAAGCAACAGTCGTCTCATGACGAGCTGaaagagTCTTTCTCCACTGCCAAAGTAGCGGGCGAGAGCCCTCTGCAATCGTTCCTCGAATTGAATAGGATGTTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAATTGCAGAACAGTGATATGCAAGAACATAATATTAAGTGCGAGCCAGACGATGACAACAGTTCCAATAGTTCTGATCCTGAACGATTAGAGATTGAAGATCGTGATGAACAGGAAATTGAAGGCGAGGCAAATGGTTATGATATGACCGTTAGTAAGAGGATTAGAGTCGAGAGTAATTACGATGGTTCCGAATCCAACACAGCAAATTGCAGTCCAGTTAATAGAATGGACACACCAGAGAGTAACTGTTCCGACGGTCACATTGATCAAGAAACGACAAAGCTATGGCAAGCTCTAGCCAACAACAGAAGCTTGGAAATTACGCGAACCAATGGTGATAAACTGAACAATGGATTTACTGGCGAAGCTACCACTTTACTACGTTCTTTGATCAACAATAGACAGATCGGTATTACTACTATTGATTCGGACAAAATGTCCTCGCAAATCAGATTTTATAGGGATACTCAAGGGACAGCTACAGAGCGTATGTTGGCTGATTTTCCTGTGCTTGGCAATCGTACTAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTCGATAGACAGTAATCCGTCTAGCCCTGCCAGTATTGGTCGTAAGGAGATGGCGACGACGACAAAAGGTCGTAGAAAACAAAGCTATCCGAGTAAAGCTCCAGCAAGTCCGGATATTATCGCCAGTTATCAATATGACCATAGCAATGAAGAGCAAGCACATGATTTTACCACATGGTCGAgcaagataaagaataagATGGACGATCAGAAATTTGATCAACAAAGCGGTAACGTAGCAAAAAAGGTCGATATGTCTTGTACAAATTGCGGCACCATGACAACAACTATTTGGAGAAGGAATATGAAGGGCGAGATGGTGTGCAACGCTTGCGGATTGTATTATAAGCTACATGGTGTTAATCGTCCGGTTACTATGCGAAGAGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAATCGACGAGGCATAGAAaaaaagggGACACTGTCTTAGCCTCTCCGTCAATAAGAGAACAAATGGATGCCGAGAGTGCGGATATGCTGAATGCTCTTCGACAACAAATTCATCCTCAGTTGATGATGCATGCGGCGTTGACGCCTACACGCATACCCAGTGGCCATCCGCCTCCATCAGTTGCTTACTCATTACCTTTATCTAGTTACATGATTCATcCACACATGAAAACCGAAGAGCGTGTGCAACGACACTTGTCTGTGGATGAGGATGCAGACGAAGGTGATGAGGAGAATGTTTCCGATGTCCCTCTCAATTTGGTGGCAACTTCACTCTCGGAGGAAACGCATTAA
Protein Sequence: MFDVPQKFYELCRLCLSLDGVKYSIFREAGTQQNFAEKISACLSITVKDDDSLPPIICQQCVCKLDMLDNFREISQKSDVLLKQYLDYTKQQSSHDELKESFSTAKVAGESPLQSFLELNRMLFNEEPNSEPASINQNIIPQTQTHHLELQNSDMQEHNIKCEPDDDNSSNSSDPERLEIEDRDEQEIEGEANGYDMTVSKRIRVESNYDGSESNTANCSPVNRMDTPESNCSDGHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATTLLRSLINNRQIGITTIDSDKMSSQIRFYRDTQGTATERMLADFPVLGNRTNIGSLENKSVQSASIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIIASYQYDHSNEEQAHDFTTWSSKIKNKMDDQKFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSTRHRKKGDTVLASPSIREQMDAESADMLNALRQQIHPQLMMHAALTPTRIPSGHPPPSVAYSLPLSSYMIHPHMKTEERVQRHLSVDEDADEGDEENVSDVPLNLVATSLSEETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00126375;
90% Identity: iTF_00181658; iTF_00182974; iTF_00015076; iTF_01476612; iTF_01477975; iTF_01262141; iTF_00016384; iTF_00417966; iTF_01477262; iTF_00017019; iTF_00015738; iTF_01520646; iTF_00130153; iTF_00126375; iTF_00127856; iTF_00127124; iTF_00129404; iTF_00128639; iTF_01523725; iTF_01421907; iTF_00385955; iTF_01424051;
80% Identity: -