Ccot005759.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- pnr
- Assembly
- GCA_001594065.1
- Location
- NW:1088450-1096541[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 3.1e+03 -2.7 0.6 22 27 57 62 54 64 0.70 2 3 0.48 9.4e+02 -1.1 0.2 2 13 230 246 230 253 0.75 3 3 7.2e-17 1.4e-13 49.6 4.3 1 35 425 458 425 459 0.98
Sequence Information
- Coding Sequence
- ATGTTTGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGACGGTGTCAAGTATTCCATATTCAAGGAGGCGGGCACTCAGCAGAATTTCGCCGAGAAGATATCGGCGTGTTTGTCAATCACAgtaAAGGATGATGATTCCTTACCACCAATTATTTGCCAGCAATGCATGTGTAAGTTGGATATGTTGGACAACTTTCGCGAAGTATCGCAAAAATCTGATGTCTTACTCAAACAGTACCTGGATTATACCAAGCAACAGTTGTCTCATGACGAGCtgaaagagTCTTTCTCCACTGCCAAAGTAGCGGGCGAAAGCCCTCTGCAATCGTTCCTCGAGTTGAATAGGATGTTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAGTTGCAGAGCAGTGATATGCAAGAACATAATATTAAGTGTGAGCCAGACGATGACAACAGTTCCAATAGTTCTGATCCTGAACGACTGGAGATCGAAGATCGTGACGAACAAGAGATTGAAGGCGAGGCAAATGGTTATGACATGACCGTTAGTAAGAGAAGTAGAGTCGAGAGCAACTACGATGGTTCTGAGTCCAACACAGCAAATTGTAGTCCAGTTAATAGAATGGACACTCCAGAGAGCAACTGTTCTGACACTAACATTGATCAAGAAACGACGAAGCTATGGCAAGCACTAGCTAaCAATAGAAGCTTGGAAATTACGAGATCCAATGGTGATAAATTGAACAATGGATTTACTGGCGAAGCTACCACTTTGCTGCGTTCTTTGATCAACAATAGACAGATCGGTATTACTACTATTGATTCGGACAAGATATCCTCGCAAATCAGATTTTATAGAGATACCCAAGGGACAGCTACAGAGCGTATATTGGCTGATTTTCCTGTGCTTGGCAATCGTACTAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTCGATAGACAGTAATCCGTCTAGCCCTGCCAGTATTGGTCGTAAAGAGATAGCGACGACGACAAAAGGTCGTAGAAAACAGAGTTATCCTAGTAAAGCTCCAGCAAGTCCGGACATTATTGCCAGTTACCAACAGGATCATAGCAATGAAGAGCAAGCACATGATTTTACCACATGGTCGAGCAAGATCAAGAATAAGATGGACGATCAGAAACAGTTTGATCAGCAAAGTGGTAACGTAGCAAAGAAGGTCGATATGTCTTGTACAAATTGCGGCACCATGACAACAACTATTTGGAGAAGGAATATGAAAGGCGAGATGGTGTGCAACGCTTGCGggttatattttaagttacatGGTGTTAATCGTCCGGTTACTATGCGAAGAGACACCATACATACGCGCAGACGTAGACCCAAAGGCGAGAAATCAACAAGGCATAGAAaaaaaggaGATATTGTCTTAGCATCTCCATCAATAAGAGAACAAATGGACGCCGAGAGTGCGGATATGCTGAATGCTCTTCGACAACAAATTCATCCTCAGTTGATGATGCATGCAGCGTTGACGCCTACGCGTATACCCGGTGGTCGTCCGCCTCCGTCAGTTGCTTACTCACTACCTTTATCTAGTTACATGATTCATcCACACATGAAAACCGAAGAGCGTGTGCAACGACACTTATCCGTGGATGAAGATGCAGACGAGGGTGATGAGGAGAATGTTTCCGATGTCCCTCTCAATTTGGTGGCAACTACACTCGCGGAGGAAACGCATTAA
- Protein Sequence
- MFDVPQKFYELCRLCLSLDGVKYSIFKEAGTQQNFAEKISACLSITVKDDDSLPPIICQQCMCKLDMLDNFREVSQKSDVLLKQYLDYTKQQLSHDELKESFSTAKVAGESPLQSFLELNRMLFNEEPNSEPASINQNIIPQTQTHHLELQSSDMQEHNIKCEPDDDNSSNSSDPERLEIEDRDEQEIEGEANGYDMTVSKRSRVESNYDGSESNTANCSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRSNGDKLNNGFTGEATTLLRSLINNRQIGITTIDSDKISSQIRFYRDTQGTATERILADFPVLGNRTNIGSLENKSVQSASIDSNPSSPASIGRKEIATTTKGRRKQSYPSKAPASPDIIASYQQDHSNEEQAHDFTTWSSKIKNKMDDQKQFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYFKLHGVNRPVTMRRDTIHTRRRRPKGEKSTRHRKKGDIVLASPSIREQMDAESADMLNALRQQIHPQLMMHAALTPTRIPGGRPPPSVAYSLPLSSYMIHPHMKTEERVQRHLSVDEDADEGDEENVSDVPLNLVATTLAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00182326;
- 80% Identity
- -