Basic Information

Gene Symbol
pnr
Assembly
GCA_017607565.1
Location
JAANIB010009334.1:592389-602847[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2 7.1e+03 -4.2 0.2 8 12 267 271 265 273 0.80
2 2 1.2e-16 1.3e-13 49.3 5.1 1 35 451 484 451 485 0.98

Sequence Information

Coding Sequence
ATGTTTGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGATGGTGTCAAGTATTCCATATTCAAGGAGGCGGGCACTCAGCAGAATTTCGCCGAGAAGATATCGGCGTGTCTGTCAATCACATCGGTGcgggggaggggagagagTGATggaaggaagaggaggaggttGCGGCTCCTTATTTGGGTGGCCTGTTATCATgtAAAAGATGATGATTCCTTACCGCCGATTATTTGCCAGCAATGCGTATGTAAGTTGGATATGCTGGACAACTTTCGCGAAATATCGCAAAAATCTGATGTCTTACTCAAACAGTACCTGGATTATACCAAGCAACAGTCGTCTCATGACGAGCTGAAAGAGTCTTTCTCCACTGCCAAAGTAGCGGGCGAGAGCCCTCTGCAATCGTTCCTCGAGTTGAATAGGATGTTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAGTTGCAGAACAGTGATATGCAAGAACATAATATTAAGTGTGAGCCAGACGATGACAACAGTTCCAATAGTTCCGATCCTGAACGACTAGAGATTGAAGATCGTGATGAACAGGAGATTGAAGGTGAGGCAAATGGTTATGATATGACCGTTAGTAAGAGGATTAGAGTCGAGAGCAACTACGATGGTTCCGAGTCCAACACAGCAAATTGCAGTCCAGTTAACAGAATGGACACACCAGAGAGTAACTGTTCCGACGGTCACATTGATCAAGAAACGACAAAGCTATGGCAAGCTCTAGCCAACAACAGAAGCTTGGAAATTACGCGAACCAATGGTGATAAACTGAACAATGGATTTACTGGCGAAGCTACCACTTTACTACGTTCTTTGATCAACAATAGACAGATCGGTATTACTACTATTGATTCGGACAAAATGTCCTCGCAAATCAGATTTTATAGGGATACCCAAGGGACAGCTACAGAGCGTATGTTGGCTGATTTTCCTGTGCTTGGCAATCGTACTAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTCGATAGACAGTAATCCGTCTAGCCCTGCCAGTATTGGTCGTAAGGAGATGGCGACGACGACAAAAGGTCGTAGAAAACAGAGCTATCCGAGTAAAGCTCCAGCAAGTCCAGACATTATCGCCAGTTACCAACACGACCATAGCAATGAAGAACAAGCACATGATTTTACCACATGGTCGAGCAAGATAAAGAATAAGATGGACGATCAGAAACAGTTTGATCAACAAAGCGGTAACGTAGCAAAAAAGGTCGATATGTCTTGTACAAATTGCGGCACCATGACAACAACTATTTGGAGAAGGAATATGAAGGGCGAGATGGTGTGCAACGCTTGCGGGTTGTATTATAAGCTACATGGTGTTAATCGTCCGGTTACTATGCGAAGAGACACCATACATACGCGCAGACGTAGACCCAAAGGCGAAAAATCGACGAGGCATAGAAaaaaagggGATACTGTCTTAGCTTCTCCATCAATAAGAGAACAAATGGATGCCGAGAGTGCGGATATGCTGAATGCTCTTCGACAACAAATTCATCCTCAGTTGATGATGCATGCGGCGTTGACGCCTACACGCATACCCGGTGGCCATCCGCCTCCGTCAGTTGCTTACTCACTACCTTTATCTAGTTACATGATTCATcCACACATGAAAACCGAAGAACGTGTGCAACGACACTTGTCTGTGGATGAGGATGCAGACGAGGGTGATGAGGAGAATGTTTCCGATGTCCCTCTCAATTTGGTGGCAACTTCACTCTCGGAGGAAACGCAT
Protein Sequence
MFDVPQKFYELCRLCLSLDGVKYSIFKEAGTQQNFAEKISACLSITSVRGRGESDGRKRRRLRLLIWVACYHVKDDDSLPPIICQQCVCKLDMLDNFREISQKSDVLLKQYLDYTKQQSSHDELKESFSTAKVAGESPLQSFLELNRMLFNEEPNSEPASINQNIIPQTQTHHLELQNSDMQEHNIKCEPDDDNSSNSSDPERLEIEDRDEQEIEGEANGYDMTVSKRIRVESNYDGSESNTANCSPVNRMDTPESNCSDGHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATTLLRSLINNRQIGITTIDSDKMSSQIRFYRDTQGTATERMLADFPVLGNRTNIGSLENKSVQSASIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIIASYQHDHSNEEQAHDFTTWSSKIKNKMDDQKQFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSTRHRKKGDTVLASPSIREQMDAESADMLNALRQQIHPQLMMHAALTPTRIPGGHPPPSVAYSLPLSSYMIHPHMKTEERVQRHLSVDEDADEGDEENVSDVPLNLVATSLSEETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00126375;
90% Identity
iTF_00182326;
80% Identity
iTF_00015076;