Apic011843.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- pnr
- Assembly
- GCA_003063865.1
- Location
- NJRM01001314.1:709-7441[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6 2.1e+04 -4.4 0.2 1 4 58 61 56 62 0.65 2 3 0.56 2e+03 -1.1 0.2 2 13 231 247 231 254 0.75 3 3 9.7e-17 3.4e-13 49.4 5.1 1 35 426 459 426 460 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGACGGTGTCAAGTTTTCCATATTCGCGGAGGGGGGCAGCCAGCAGAATTACGCCGAGAAGATATCGGCGTGCCTGTCAATCACGGTAAAAGATGACGATTCCTTACCACCGATTATCTGTCAGCAGTGTGTATGTAAGTTGAACATGCTGGACAACTTTCGCGAAGTGTCGCAAAAGTCTGACGTCTTACTCAAACAGTACCTGGATTATACCAAGCAACAGCCGTCTCATGACGAGCAGAAAGAGTCTTTCTCCACTGCCAAAATAGCGGGCGAGAGCCCTCTGCAATCGTTCCTCGACTTGAATAGGATGTTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAGTTGCAGGACAGCGATATGCGAGAACACGATAATATTAAGTGCGAGCCAGATGACGACGACAGTTGCAACAGTTCGGATCCTGAAcgattggagattgaggatcgCGACGAACAAGAGATTGAAGGCGAGGAAAATGGTTACGATATGACCATCAGTAAAAGGATTAGAGTCGAGAGCAACTACGATGGCTCCGAGTCTAACACAGCAAATTGTAGCCCGATTAACAGAATGGATACTCCAGAGAGCAACTGCTCCGACACTAACATTGATCAGGAAACGACGAAGCTATGGCAAGCTCTAGCTAACAATAGAAGCTTGGAAATCACGCGAACAAATGGTGATAAACTGAACAATGGATTCGCCGGCGAAGCGACTAATCTTCTGCGTTCTTTGATCAACAATAGACAGATCGGTATTACCGCCATTGATTCGGACAAGATATCCCCGCAAATCAGATTTTATAGGGATACCCAAGGGACAACTACCGAGCGTACGTTGGCCGATTTCCCTGTGCTCGGTAATCGTACCAATATAGGAAACTTAGAAAATAAGTCTGTACAGAGTGCTTCGATAGATAGTAATCCGTCTAGCCCTGCCAGCATCGGTCGTAAGGagatggcgacgacgacgaaaggTCGCAGAAAGCAGAGCTATCCCAGTAAGGCTCCAGCAAGTCCGGACATTGTTGCCAGTTACCAACACGAACACAATGAGGAACAAGCGCATGATTTTACCACATGGCCAAGCAAAATAAAGAACAAGATGGATGACCAGAAGCAACAGTTCGATCAGCAAAGCGGTAATGTGGCAAAAAAGGTCGATATGTCTTGTACAAATTGCGGCACCATGACAACAACCATCTGGAGAAGAAATATGAAGGGCGAGATGGTGTGCAATGCTTGCGGGTTGTACTACAAACTGCATGGTGTTAATCGTCCGGTTACTATGCGGAGGGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAACCAACAAGGCATAGAAaaaaaggagACACAGTCTTAGCATCTCAGTCAACAAGAGAACAAATGGATGCCGAGAGTGCGGATATGCTGAATGCCCTTCGGCAACAAATTCATCCTCAATTGATGATGCATGCAGCGATGACGCCTACGCGCATACCCGGTGGCCATCCGCCTCCGCCAGTTACTTACTCACTACCTTTATCTAGTTACATGATTCACCAACACGTGAAAACCGAGGAGCGTATGCAACGGCACTTGTCAGTGGATGAAGAAGTGGACGAAGGCGATGAGGAGAACGTTTCTGATGTTCCCCTCAATCTGGTGGCGACTTCACTCTCAGAGGAGACGCATTAA
- Protein Sequence
- MFDVPQKFYELCRLCLSLDGVKFSIFAEGGSQQNYAEKISACLSITVKDDDSLPPIICQQCVCKLNMLDNFREVSQKSDVLLKQYLDYTKQQPSHDEQKESFSTAKIAGESPLQSFLDLNRMLFNEEPNSEPASINQNIIPQTQTHHLELQDSDMREHDNIKCEPDDDDSCNSSDPERLEIEDRDEQEIEGEENGYDMTISKRIRVESNYDGSESNTANCSPINRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFAGEATNLLRSLINNRQIGITAIDSDKISPQIRFYRDTQGTTTERTLADFPVLGNRTNIGNLENKSVQSASIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIVASYQHEHNEEQAHDFTTWPSKIKNKMDDQKQQFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDTVLASQSTREQMDAESADMLNALRQQIHPQLMMHAAMTPTRIPGGHPPPPVTYSLPLSSYMIHQHVKTEERMQRHLSVDEEVDEGDEENVSDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00182326;
- 80% Identity
- iTF_00130153;