Tsim011034.1
Basic Information
- Insect
- Tetramorium simillimum
- Gene Symbol
- pnr
- Assembly
- GCA_011636635.1
- Location
- VBVQ01005131.1:1-9906[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.59 1.9e+03 -0.9 0.2 2 13 185 201 185 208 0.75 2 2 1e-16 3.3e-13 49.5 5.1 1 35 381 414 381 415 0.98
Sequence Information
- Coding Sequence
- GTAAAAGATGGTGATTCCTTACCACCAATTATCTGCCAGCGGTGTGTATATAAGTTGGACATGCTGGACAACTTTCGCGATGTGTCGCAAAAGTCTGACGTCTTACTCAAACAGTACCTGGATTTTACCAAGCAACAGTCGTCTCATGACGAGCAGAAAGAGTCTTTCTCCACTGCCAAAGTAGCGGGCGAGAGCCCTCTGCAAACGTTCCTCGAGTTGAATAGGTTATTGTTCAACGGGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACGTAATACCTCAAACTCAAACGCATCATCTAGAGTTGCAGAATAACGATATGCGAGAACATGATAATATTAAGTGCGAGCCAGACGATGACAACAGTTCCAACAGTTCTGATCCTGAACGACTGGAGATTGAAGATCGTGACGAACACGAAATCGAAGACGAGGAAAATGGTTACGATATGACCATCAGTAAGAGGATTCGAGTCGAGAGCAACTACGACGGCTCCGAGTCCAACACAGCAAACTGCAGTCCAGTTAATAGAATGGATACTCCAGAGAGCAACTGCTCCGACACTAATATCGATCAGGAAACGACGAAGCTATGGCAGGCTTTAGCCAACAATAGAAGCTTGGAAATTACGCGAACAAATGGTGACAAATTGAACAATGGATTCACCGGCGAAGCAACCAATCTGCTACGTTCTTTAATCAACAACAGGCAGATCGGTATTACTACCATTGATGCAGACAAGATATCCCCTCAAATCAGATTCTACAGGGATACTCAGGGGACAGCTACCGAGCGTACATTGGCCGATTTCCCTGTACTCGGCAATCGTACCAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTCAATAGACAGTAATCCATCTAGCCCTGCCAGTATTGGTCGTAAGGAAGTGGCGACAACGACAAAAGGTCGCAGGAAGCAGAGCTATCCCAGTAAAGCTCCAGCAAGTCCGGACATTGTCGTCAGTTACCAACACGAACACAACAATGAGGAGCAAGCGCATGATTTCACATGGTCGAGCAAGATAAAGAATAAGATGGAGCAGGATCAGAAGCAACAGTTTGATCAACAAAGTGGTAACGTGGCGAAAAAGGTTGATATGTCTTGTACAAATTGCGGCACCATGACAACAACCATTTGGAGAAGAAACATGAAGGGCGAGATGGTGTGCAACGCATGCGGGTTGTATTATAAGTTGCATGGCGTTAATCGTCCGGTCACTATGCGAAGGGACACTATACATACGCGCAGACGCAGACCCAAAGGCGAGAAACCAACAAAGCATAGAAAAAAAGGAGACGCAGTCTTAGCATCTCAATCGACAAGAGAACAAATGGATGCCGAGAGTGCGGACATGCTGAATGCTCTTCGACAACAAATTCATCCTCAGCTTATGATGCATGCAGCGTTGACACCTACGCGCATTCCTGGTGGCCATCCACCTCCACCAGTCGCTTACTCAATACCTTTATCTAATTACATGATTCATCAACACGTGAAAAACGAAGAACGTCTGCAACGGCATTTGTCCATAGATGAGGAAGTGGATGAAGGCGACGAGGAGAACGTTTCTGATGTTCCCCTTAATCTGGTAGCGACTTCACTCTCGGAGGAAAcgcattaa
- Protein Sequence
- VKDGDSLPPIICQRCVYKLDMLDNFRDVSQKSDVLLKQYLDFTKQQSSHDEQKESFSTAKVAGESPLQTFLELNRLLFNGEPNSEPASINQNVIPQTQTHHLELQNNDMREHDNIKCEPDDDNSSNSSDPERLEIEDRDEHEIEDEENGYDMTISKRIRVESNYDGSESNTANCSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITTIDADKISPQIRFYRDTQGTATERTLADFPVLGNRTNIGSLENKSVQSASIDSNPSSPASIGRKEVATTTKGRRKQSYPSKAPASPDIVVSYQHEHNNEEQAHDFTWSSKIKNKMEQDQKQQFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTKHRKKGDAVLASQSTREQMDAESADMLNALRQQIHPQLMMHAALTPTRIPGGHPPPPVAYSIPLSNYMIHQHVKNEERLQRHLSIDEEVDEGDEENVSDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00182326;
- 80% Identity
- -