Veme001041.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- pnr_2
- Assembly
- GCA_000949405.1
- Location
- NW:39423-67882[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6 1.3e+04 -5.0 1.8 1 5 59 63 57 65 0.73 2 3 0.48 1.1e+03 -1.1 0.2 2 13 232 248 232 255 0.75 3 3 8.4e-17 1.9e-13 49.4 5.1 1 35 428 461 428 462 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATATACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTCGACGACGGTGTCAAGTATTCCATATTCGAGGAGGGGGGCGCCCAGCAGAATTTCGCCGAGAAGATATCGGCGTACCTGTCAATCACGGTAAAAGACGATGATTCCCTACCGCCGGTTATCTGCCAGCAGTGTGCATGCAAGCTGAGCATGCTGGACAACTTTCGCGAACTGTCGCAAAAGTCTGATGTCATACTCAAACAGTACCTGGATTGTACCAAGCAACTGTCGTCCCATGACGAGCAGAAAGAGTCTTTCTCCACTGCCAAAGTAGCGGGCGAGAGCCCTCTGCAATCGTTCCTCGAATTGAGCAGGATGTTGTTCAAGGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACGTAATACCTCAAACACAAACGCATCATCTGGAGTTGCAAAGCAGCAATATGCGAGAACACGATAATATTAAGTGCGAGCCAGACGATGACAGCAGTTCCAACAGCTCCGATCCTGAGCGACTGGAGATTGAAGATCGCGACGAGCAGGAGATGGAAGGCGAGGAGAACGGTTACGACATGACCGTCAGCAAGAGGATTCGGGTCGACAGCAACTACGACGGCTCCGAGTCCAACACGGCGAATTGCAGTCCGGTTAATAGAATGGACACGCCGGAGAGCAATTGCTCCGACACCAACATCGATCAGGAAACGACGAAGCTGTGGCAGGCTCTAGCCAACAATAGAAGCTTGGAAATTACGCGAACAAATGGTGATAAATTGAACAATGGATTCACCGGCGAAGCGACTAATCTGCTGCGCTCTTTGATCAACAACAGGCAGATCGGTATTACTGCCATTGATTCGGACAAGATGTCTCCGCAAATCAGATTCTACAGGGACACCCAGGGGACAGCTACCGAGCGTGCGTTGACCGATTTCCCTGTGCTCGGTAATCGTACCAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTTGATAGACAGTAATCCGTCTAGCCCTGCCAGTATTGGTCGCAAGGAgatggcgacgacgacgaagggTCGCAGAAAACAGAGTTATCCCAGTAAAGCACCAGCAAGTCCGGACATTGTCGCCAGTTACCAACATGAACATAATGAAGAGCAAGCACATGATTTTACCACATGGTCGAGCAAGATAAAGAATAAGaTGGAGCAAGATCAGAAGCAACAGTTCGATCAGCAAAGCGGTAACGTGGCGAAGAAGGTTGATATGTCTTGTACAAATTGCGGCACCATGACAACAACCATCTGGAGAAGAAATATGAAGGGCGAGATGGTGTGCAACGCCTGTGGGTTGTATTACAAGTTGCACGGTGTTAATCGCCCGGTTACTATGCGAAGGGACACTATACATACGCGTAGACGCAGACCCAAGGGCGAGAAACCAACAAGGCATAGAAaaaaaggaGATGCAGTCTTAGCATCTCAGTCGACAAGAGAACAAATGGATGCCGAGAGTACGGACATGTTGAACGCTCTTCGACAGCAAATTCATCCTCAGCTGATGATGCATGCAGCGCTGACAACGCCTACGCGCATACCCGGTGGCCATCCGCCTCCGCCAGTTGGTTACTCAATACCTTTATCTAATTACATGATTCATCAACACATGAAAACCGAAGAGCGTATGCAACGACATTTGTCAGTGGATGAGGAAGCAGACGAAGGCGATGAGGAGAACGTTTCTGATGTTCCCCTCAATTTGGTGGCAACTTCCCTTTCAGAGGACACgcattaa
- Protein Sequence
- MFDIPQKFYELCRLCLSLDDGVKYSIFEEGGAQQNFAEKISAYLSITVKDDDSLPPVICQQCACKLSMLDNFRELSQKSDVILKQYLDCTKQLSSHDEQKESFSTAKVAGESPLQSFLELSRMLFKEEPNSEPASINQNVIPQTQTHHLELQSSNMREHDNIKCEPDDDSSSNSSDPERLEIEDRDEQEMEGEENGYDMTVSKRIRVDSNYDGSESNTANCSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAIDSDKMSPQIRFYRDTQGTATERALTDFPVLGNRTNIGSLENKSVQSALIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIVASYQHEHNEEQAHDFTTWSSKIKNKMEQDQKQQFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDAVLASQSTREQMDAESTDMLNALRQQIHPQLMMHAALTTPTRIPGGHPPPPVGYSIPLSNYMIHQHMKTEERMQRHLSVDEEADEGDEENVSDVPLNLVATSLSEDTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00182326;
- 80% Identity
- -