Acep009281.1
Basic Information
- Insect
- Atta cephalotes
- Gene Symbol
- pnr
- Assembly
- GCA_000143395.2
- Location
- NW:9447958-9457720[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 7e+03 -4.1 0.1 8 12 241 245 239 248 0.81 2 2 9.7e-17 1.4e-13 49.4 5.1 1 35 424 457 424 458 0.98
Sequence Information
- Coding Sequence
- ATGTTTGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCCTGGATGGTGTCAAGTATTCCATATTCAAGGAGGCGGGCACTCAGCAGAATTTCGCCGAGAAGATATCGGCGTGTCTGTCAATCACAgtAAAAGATGATGATTCCTTACCGCCGATTATTTGCCAGCAATGCGTATGTAAGTTGGATATGCTGGACAACTTTCGCGAAATATCGCAAAAATCTGATGTCTTACTCAAACAGTACCTGGATTATACCAAGCAACAGTCGTCTCATGACGAGCTGaaagagTCTTTCTCCACTGCCAAAGTAGCGGGCGAGAGCCCTCTGCAATCGTTCCTCGAATTGAATAGGATGTTGTTCAACGAGGAGCCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTAGAATTGCAGAACAGTGATATGCAAGAACATAATATTAAGTGCGAGCCAGACGATGACAACAGTTCCAATAGTTCTGATCCTGAACGATTAGAGATTGAAGATCGTGATGAACAGGAAATTGAAGGCGAGGCAAATGGTTATGATATGACCGTTAGTAAGAGGATTAGAGTCGAGAGTAATTACGATGGTTCCGAATCCAACACAGCAAATTGCAGTCCAGTTAATAGAATGGACACACCAGAGAGTAACTGTTCCGACGGTCACATTGATCAAGAAACGACAAAGCTATGGCAAGCTCTAGCCAACAACAGAAGCTTGGAAATTACGCGAACCAATGGTGATAAACTGAACAATGGATTTACTGGCGAAGCTACCACTTTACTACGTTCTTTGATCAACAATAGACAGATCGGTATTACTACTATTGATTCGGACAAAATGTCCTCGCAAATCAGATTTTATAGGGATACCCAAGGGACAGCTACAGAGCGTATGTTGGCTGATTTTCCTGTGCTTGGCAATCGTACTAATATAGGAAGCTTAGAAAATAAGTCTGTACAGAGTGCTTCGATAGACAGTAATCCGTCTAGCCCTGCCAGTATTGGTCGTAAGGAGATGGCGACGACGACAAAAGGTCGAAGAAAACAGAGCTATCCGAGTAAAGCTCCAGCAAGTCCGGATATTATCGCCAGTTATCAATATGACCACAGCAATGAAGAGCAAGCACATGATTTTACCACATGGTCGAgcaagataaagaataagATGGACGATCAGAAATTTGATCAACAAAGCGGTAACGTAGCAAAAAAGGTCGATATGTCTTGTACAAATTGCGGCACCATGACAACAACTATTTGGAGAAGGAATATGAAGGGCGAGATGGTGTGCAACGCTTGCGGATTGTATTATAAGCTACATGGTGTTAATCGTCCGGTTACTATGCGAAGAGACACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAATCGACGAGGCATAGAAaaaaagggGACACTGTCTTAGCCTCTCCGTCAATAAGAGAACAAATGGATGCCGAGAGTGCGGATATGCTGAATGCTCTTCGACAACAAATTCATCCTCAGTTGATGATGCATGCGGCGTTGACGCCTACACGCATACCCAGTGGCCATCCGCCGCCGTCAGTTGCTTACTCATTACCTTTATCTAGTTACATGATTCATcCACACATGAAAACCGAAGAGCGTGTGCAACGACACTTGTCTGTGGATGAGGATGCAGACGAAGGTGATGAGGAGAATGTTTCCGATGTCCCTCTCAATTTGGTGGCAACTTCACTCTCGGAGGAAACGCATTAA
- Protein Sequence
- MFDVPQKFYELCRLCLSLDGVKYSIFKEAGTQQNFAEKISACLSITVKDDDSLPPIICQQCVCKLDMLDNFREISQKSDVLLKQYLDYTKQQSSHDELKESFSTAKVAGESPLQSFLELNRMLFNEEPNSEPASINQNIIPQTQTHHLELQNSDMQEHNIKCEPDDDNSSNSSDPERLEIEDRDEQEIEGEANGYDMTVSKRIRVESNYDGSESNTANCSPVNRMDTPESNCSDGHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATTLLRSLINNRQIGITTIDSDKMSSQIRFYRDTQGTATERMLADFPVLGNRTNIGSLENKSVQSASIDSNPSSPASIGRKEMATTTKGRRKQSYPSKAPASPDIIASYQYDHSNEEQAHDFTTWSSKIKNKMDDQKFDQQSGNVAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKSTRHRKKGDTVLASPSIREQMDAESADMLNALRQQIHPQLMMHAALTPTRIPSGHPPPSVAYSLPLSSYMIHPHMKTEERVQRHLSVDEDADEGDEENVSDVPLNLVATSLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00182326;
- 80% Identity
- -