Alab022783.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- bab1
- Assembly
- GCA_014066325.1
- Location
- JACEOM010000356.1:243597-418704[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 5.6e-14 52.6 0.0 1 43 376 419 376 421 0.95 2 2 4.4 2.3e+04 -3.8 2.3 6 15 498 507 496 508 0.88
Sequence Information
- Coding Sequence
- ATGACGCAGCAAAGCGGGGCTGGGTCGCCCCAGCAATTCTGCCTACGTTGGAACAATTACCAGACGAATCTGACCAACGTGTTCGACCAACTTCTCCAGAGCGAGAGTTTCGTTGACGTGACCCTTGCCTGCGACGGGCACAGCGTGAAAGCGCACAAGATGGTACTGTCCGCGTGCAGCCCTTACTTCCAAGCCCTTTTCTTCGACAATCCATGCCAACACCCGATCGTCATCATGAAGGACATCAAGTGGCCCGAGCTCAAGGCCGCCGTCGAGTTCATGTACAAGGGTGAGATAAACGTGTCCCAGGAGCAGATCGGCCCCCTCCTCAAAGTTGCCGAGAGCCTGAAGATACGCGGCCTGGCAGACGTGAACAACGAGCACGAGTTGACGTCGAGATCGAACCTCGAGGAGGCGGCGAACGCCGCCCTTCACAGGAAGAAGAGGCGCCGAATATCGGGCGAGAGATCGCCCCCCGCGTGCAGCCCCGACCGGATCCCCGGTTCGGGGAGCATCCCCGACGACCAGGAGCCGAACCAGGTGGGCGGCGGGGTGATCGTGCCCGACATCCACGGCATGCTGCCCAGCAGCTCGACCCCGCGATCCCTCGGATCCCCGGGCACGCCCAACGTCTCCGTCACGCCGCAGATCAACCTCCAAGAACTTCCGGTATCGCTGCCCCTGccgccaccgccaccgccGCCCCCTCAGCCCGGCCAGCCGAGCTCGCACTCGATACCCGCTCACCACGTGCCTCCCCACGTGACTTCCGTTCCCCACGCGCCCGTCAACCACCTGACCGCCCATGGCCAGCAACTTGCCGGCCtccagcagcagcagcagcagcagcagcaacagcaacagcagcaccTCCCGCAGCCGGGACCTATCCAACCTAATCCCGGGGACGATCTCGAGATCAAGCCTGGCATCGCCGAGATGATTCGCGAGGAGGAAAGGGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCAGACAGCTACCAGTATCAGCTGCAATCGATGTGGCAGAAATGTTGGAACACCAATCAGAGCCTGGTCCACAATCTGCGCTTTCGTGAACGTGGCCCGCTCAAATCTTGGCGACCGGAAACGATGGCGGAGGCGATCTTCAGCGTCCTGAAAGAAGGATTGTCCTTGAGTCAGGCAGCTAGGAAATACGACATCCCTTACCCGACGTTCGTGTTGTATGCCAATCGGGTACATAATATGCTAGGTCCGAGCGCCGATGGCGGAGCTGATCTTCGCCCAAAAGGTAGAGGAAGGCCGCAAAGGATTCTACTAGGCGTTTGGCCGGACGAGCACATTCGCGGGGTGATCCGAGCCGTCGTGTTCCGCGACGGTCATTCCCCGCACATGGTGAAGGAAGAGCCAACTATATATCCTGGTCTGGCGAATTACGCAGCTTGCAACGGTCCGGAAGGCGCGGTCAGTCCCGGAGCGGCAGCCGCGGCCGCGGTTGCCGCAGTCGCTCAAGGACTGCGGCATCAAATGTGCAGCATGGTGGCGGCAGCGCACTCGCAACAGCACGACATGATGGCGACAAATCTCTCCACGAACCTGTCCACGAGCCTCACGTCGAATCTGCAGGCGGCGATGCAAGCCAGCCAGCATCACCACAACAACAGCGGGCCTATTATCGGCAGCAACAACGGTGGGCACACCGGTAACTCGCCGTTGAACCTAGGCCTGGGAAGTCCGGGCAGCGGTGGCCCACCCGAGAGCCCGATGGAGAGCCCCCTCGCCAGCCCTCTCGGCCCCCTAATGGATCCCGGCCACATACCAAGCAGCGTGGAAGTCGGAATCGGCGTGAGCGGAATGACCTACAAACCGGCACGAAGCTTCGTCAGCCCGCGGCCGGAGACCCTTTTTCAGGAGGATATCGCGGATCTCGTGAAGAGTCCGCACGGGCTCAAGGACAAGGACAAGATCCCCGTTAAACTCGAGCCGTTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNNEHELTSRSNLEEAANAALHRKKRRRISGERSPPACSPDRIPGSGSIPDDQEPNQVGGGVIVPDIHGMLPSSSTPRSLGSPGTPNVSVTPQINLQELPVSLPLPPPPPPPPQPGQPSSHSIPAHHVPPHVTSVPHAPVNHLTAHGQQLAGLQQQQQQQQQQQQQHLPQPGPIQPNPGDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSSIADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEEPTIYPGLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTSLTSNLQAAMQASQHHHNNSGPIIGSNNGGHTGNSPLNLGLGSPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPETLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141907; iTF_00232066; iTF_00231908; iTF_00214473; iTF_00232681; iTF_00230764; iTF_00214319; iTF_00232532; iTF_00230617; iTF_01476846; iTF_00015300; iTF_00015463; iTF_01477010; iTF_00182057; iTF_00181891; iTF_01477490; iTF_01477709; iTF_01087311; iTF_01087125; iTF_00452502; iTF_00452662; iTF_01406668; iTF_01406409; iTF_01270612; iTF_01270415; iTF_00898877; iTF_00898669; iTF_01122353; iTF_01122531; iTF_00729974; iTF_00730160; iTF_00684087; iTF_00684242; iTF_00966103; iTF_00965957; iTF_01232471; iTF_01232332; iTF_01355224; iTF_01355524; iTF_00264921; iTF_00265112; iTF_01520377; iTF_01520142; iTF_01233083; iTF_01232923; iTF_00360988; iTF_00360827; iTF_00142397; iTF_00142540; iTF_00761055; iTF_00760908; iTF_01099327; iTF_01099109;
- 90% Identity
- iTF_00141907; iTF_00232066; iTF_00231908; iTF_00214473; iTF_00232681; iTF_00230764; iTF_00214319; iTF_00232532; iTF_00230617; iTF_00684087; iTF_00684242; iTF_00142397; iTF_00142540;
- 80% Identity
- iTF_00141907;