Hlab001796.1
Basic Information
- Insect
- Habropoda laboriosa
- Gene Symbol
- bab1
- Assembly
- GCA_001263275.1
- Location
- NW:383619-506944[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.5e-14 52.6 0.0 1 43 380 423 380 425 0.95 2 2 5.2 6.3e+03 -3.9 2.3 6 15 503 512 501 513 0.88
Sequence Information
- Coding Sequence
- ATGACGCAACAGAGCGGCGCTGGGTCCCCCCAGCAATTTTGCCTCAGGTGGAACAACTATCAGACGAATCTGACCAACGTGTTCGATCAGCTATTGCAAAGCGAGAGCTTCGTGGACGTGACCCTTGCCTGCGACGGGCACAGCGTGAAGGCCCACAAGATGGTGTTGTCCGCGTGTAGTCCTTACTTCCAGGCGCTTTTTTTCGACAATCCATGCCAGCATCCGATCGTGATCATGAAGGACATCAAGTGGCCAGAGTTGAAGGCCGCGGTGGAGTTCATGTACAAGGGGGAGATCAACGTGTCGCAGGAGCAGATCGGGCCGCTGCTGAAGGTGGCCGAGAGCTTGAAGATTCGCGGGTTGGCGGACGTGAACAGCGAACAAGAGTTGACGTCGAGGTCGAGCTTGGAGGAGGCGGCGAACGCGGCGATGATGCACAGGAAGAAACGACGCCGAATATCCGGAGAGAGATCGCCGCCGGCGAGCAGTCCGGATCGAATCGCGTCCGGCTCGCTTCCGGATGACCAGGACCCGAGCAACGGCGGAGGAGGCGTGATCGTGCCCGACATTCACGGCATGCTGCAGAGCAGCTCGACTCCGCGATCCCTCGGATCCCCCGGCACGCCCAGCGTCTCGGTCACGCCGCAGATCAACCTCCAGGAACTTCCGGTATCGCTGCCcctgccgccgccgccgccaccgcccCCCCAGGGCCAGCAGAGCTCGCACTCGGTGTCCGCTCACCACGTGCCCGGCCACGTGACTTCCGGTCCCCACGCCTCCGTCAACCACCTGGCCACTCACGGCCAGCAGCTCACCgtgcagcaacagcagcagcagcagcagcaacaacagcagcaacagcagcagcagcagcaacaccATCAGCAGGGAGTTCCCGGTCAACCGACACCAGATGATCTCGAGATCAAGCCCGGCATCGCCGAGATGATTCGCGAGGAGGAAAGGGCCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGAGCCTCTACATCGAGTATAGCAGCAGACAGCTACCAGTATCAGCTGCAATCGATGTGGCAGAAGTGCTGGAACACCAATCAAAGCCTGGTGCACAATCTACGCTTTCGCGAGCGTGGTCCGCTCAAGTCTTGGCGACCGGAAACCATGGCGGAGGCGATCTTCAGCGTCCTGAAGGAAGGATTGTCCTTGAGTCAAGCGGCGAGGAAATACGACATCCCGTATCCGACGTTCGTGCTGTATGCTAATCGAGTGCACAATATGCTGGGACCGAGCGCCGATGGCGGAGCCGATCTACGCCCGAAAGGTAGAGGCAGACCGCAGAGGATTCTGCTGGGCGTGTGGCCGGACGAGCACATTCGCGGGGTGATCCGGGCCGTCGTGTTCCGCGACGGCCACTCTCCGCACATAGTGAAGGAAGAGCCGACTACGATGTACCCGAGTTTGGCCAATTACGCCGCCTGCAACGGACCCGAAGGCGCGGTCAGCCCCGGAGCAGCAGCCGCGGCCGCGGTTGCCGCGGTCGCTCAAGGACTGCGACATCAGATGTGCAGCATGGTAGCAGCGGCGCACTCGCAACAACACGACATGATGGCGACGAATCTCTCCACGAATCTCTCCTCGAATCTCTCCACGAGTCTCTCGTCGAATCTACAGGCAGCGATGCAGGCTAGCCAGCATCACCACAACAGCAACAGCGGCGTACCTGTAATCGGTAGTAACAACGGGAGCGGAGGCGGAGGCGGGAACAACGGGAATTCGCCTTTAAATTTAGGCCTAGCCAGTCCAGGCTCGGGCGGTCCACCCGAGAGCCCGATGGAGAGTCCTCTGGCGAGCCCTCTCGGTCCGCTAATGGATCCAGGACATATACCGAGTAGCGTAGAAGTCGGAATAGGCGTGAGTGGAATGACGTATAAACCGGCGCGGAGCTTCGTGAGCCCGCGGCCGGAGAATCTGTTCCAAGAGGACATCGCGGACCTCGTGAAGAGTCCGCACGGGCTCAAGGACAAGGACAAAATCCCCGTGAAGCTGGAGCCGTTGACGGATTCGCGTTGCGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNSEQELTSRSSLEEAANAAMMHRKKRRRISGERSPPASSPDRIASGSLPDDQDPSNGGGGVIVPDIHGMLQSSSTPRSLGSPGTPSVSVTPQINLQELPVSLPLPPPPPPPPQGQQSSHSVSAHHVPGHVTSGPHASVNHLATHGQQLTVQQQQQQQQQQQQQQQQQQQHHQQGVPGQPTPDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSSNLSTSLSSNLQAAMQASQHHHNSNSGVPVIGSNNGSGGGGGNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141751;
- 90% Identity
- iTF_00966103;
- 80% Identity
- iTF_00761055;