Amei002895.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- bab1
- Assembly
- GCA_003254395.2
- Location
- NC:10232153-10407727[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 1.5e-14 52.5 0.0 1 43 400 443 400 445 0.95 2 2 4.6 6.2e+03 -3.9 2.3 6 15 522 531 520 532 0.88
Sequence Information
- Coding Sequence
- ATGACGCAGCAAAGCGGGGCTGGGTCGCCCCAGCAATTCTGCCTACGGTGGAACAATTACCAGACGAATCTGACCAACGTGTTCGACCAGCTTCTCCAGAGCGAGAGTTTCGTTGACGTGACCCTCGCCTGCGACGGGCACAGCGTGAAAGCGCACAAGATGGTACTGTCCGCGTGCAGCCCCTACTTCCAAGCCCTTTTCTTCGACAATCCATGCCAGCACCCGATCGTCATCATGAAGGACATCAAGTGGCCCGAGCTCAAGGCCGCGGTCGAGTTCATGTACAAGGGGGAGATAAACGTGTCCCAGGAGCAGATCGGCCCCCTCCTCAAGGTGGCGGAGAGCCTCAAGATACGGGGCCTGGCCGACGTGAACAACGAGCACGAGTTGGCGTCGAGATCGAACCTCGAGGAGGCGGCCAGCGCCGCCCTTCACAGGAAGAAGAGGCGCCGAATATCGGGCGAGAGGTCGCCCCCCGCGTGCAGCCCCGACCGGATCCCCGGCTCGGCCAGCATCCCCGACGACGGGGAGCCGAGCCAGGTGGGGGGCGGGGTGATCGTGCCCGACATCCACGGCATGCTGCCGAGCAGCTCGACCCCGCGCTCCCTCGGCTCCCCGGGCACGCCCAACGTCTCTGTCACCCCGCAGATCAACCTCCAGGAACTTCCGGTATCGCTGCCcctgccgccgccgccgccgccgcccccTCAGCCCGGCCAGCCGAGCTCGCACTCCATACCCGCTCACCACGTGCCTCCCCACGTGACTTCCGGTCCCCACGCGCCCGTCAACCACCTGACCGCCCATGGCCAGCAGCTCGCCgtgcagcagcagcagcagcagcaacagcagcagcaacagcagcagcaacaccACCCCCAGCCAGGACCTATCGTCGTCCCGCCGAACCCCGGGGACGATCTCGAGATCAAGCCTGGCATCGCCGAGATGATTCGCGAGGAGGAAAGGGTGAGTACGCTACAATGGAATGTCTTCTTCGCCGTGAACGAGGCGTCGGCCGACCGCTCTCACGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCAGACAGCTACCAGTATCAGCTGCAATCCATGTGGCAGAAATGTTGGAACACCAATCAGAGCCTGGTCCACAATCTGCGCTTTCGCGAACGTGGCCCGCTCAAATCTTGGAGACCGGAAACGATGGCGGAGGCGATCTTCAGCGTCCTGAAGGAAGGATTATCCTTGAGCCAAGCCGCTAGGAAATACGACATCCCTTACCCGACGTTCGTCTTGTATGCCAATCGAGTACATAATATGCTAGGTCCGAGCGCCGATGGCGGAGCTGATCTTCGCCCAAAAGGTAGAGGAAGGCCGCAAAGGATTCTACTAGGCGTTTGGCCGGACGAGCACATTCGCGGGGTGATCCGAGCCGTGGTGTTCCGCGACGGTCATTCCCCGCACATGGTGAAGGAAGAGCCAACCATGTACCCTGGTCTGGCGAATTACGCAGCTTGCAACGGTCCCGAAGGGGCGGTCAGTCCCGGAGCGGCAGCCGCGGCCGCGGTTGCCGCAGTCGCTCAAgGACTGCGGCATCAAATGTGCAGCATGGTAGCGGCGGCGCACTCGCAACAGCACGACATGATGGCGACGAATCTCTCCACGAACCTGTCCACGAGCCTCACGTCGAACCTACAGGCGGCGATGCAAGCCAGCCAGCATCACCACAACAACAGCGGGCCTCTGCTCGGCAACAACGGCGGGAACACCGGCAACTCGCCGTTGAACCTAGGCCTGGGTAGCCCGGGCAGCGGTGGCCCGCCCGAGAGCCCGATGGAGAGCCCCCTCGCCAGCCCCCTCGGCCCCCTCATGGATCCCGGCCACATACCGAGCAGCGTGGAAGTCGGAATCGGCGTGAGCGGAATGACCTACAAACCCGCACGAAGCTTCGTCAGCCCCCGGCCGGAGACCCTTTTTCAGGAGGATATCGCGGACCTCGTGAAGAGTCCGCACGGGCTCAAGGACAAGGACAAGATCCCCGTTAAGCTCGAGCCGTTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNNEHELASRSNLEEAASAALHRKKRRRISGERSPPACSPDRIPGSASIPDDGEPSQVGGGVIVPDIHGMLPSSSTPRSLGSPGTPNVSVTPQINLQELPVSLPLPPPPPPPPQPGQPSSHSIPAHHVPPHVTSGPHAPVNHLTAHGQQLAVQQQQQQQQQQQQQQQHHPQPGPIVVPPNPGDDLEIKPGIAEMIREEERVSTLQWNVFFAVNEASADRSHAKLLESSHAWLGASTSSIADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEEPTMYPGLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTSLTSNLQAAMQASQHHHNNSGPLLGNNGGNTGNSPLNLGLGSPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPETLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141751;
- 90% Identity
- iTF_00141751;
- 80% Identity
- iTF_00142540;