Asor026549.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- ZNF711
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000095.1:865936-870545[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0012 0.098 14.0 1.5 1 23 79 102 79 102 0.97 2 20 6.5 5.5e+02 2.2 0.0 3 23 130 151 128 151 0.85 3 20 0.0012 0.1 13.9 1.4 2 23 175 196 174 196 0.97 4 20 0.00016 0.014 16.7 0.2 1 23 200 222 200 222 0.97 5 20 0.062 5.2 8.5 3.0 1 23 227 250 227 250 0.97 6 20 6.2 5.2e+02 2.2 0.8 2 10 256 264 255 278 0.79 7 20 0.00043 0.036 15.3 0.4 2 23 287 309 286 309 0.96 8 20 5.5e-05 0.0046 18.1 1.0 1 23 315 337 315 337 0.98 9 20 0.017 1.4 10.3 2.2 1 23 343 365 343 365 0.98 10 20 3.4e-05 0.0029 18.8 2.8 1 23 371 394 371 394 0.98 11 20 0.003 0.25 12.6 0.5 1 23 459 482 459 482 0.93 12 20 0.34 28 6.2 0.2 2 23 509 531 508 531 0.95 13 20 0.0026 0.22 12.9 2.0 2 23 554 575 553 575 0.96 14 20 4.2 3.5e+02 2.8 1.0 1 14 579 592 579 601 0.79 15 20 0.049 4.1 8.8 4.5 1 23 606 629 606 629 0.96 16 20 0.49 41 5.7 0.7 2 14 637 649 636 659 0.80 17 20 0.0001 0.0086 17.3 1.1 2 23 667 689 666 689 0.96 18 20 0.00013 0.011 16.9 0.8 1 23 695 717 695 717 0.98 19 20 1.1e-05 0.0009 20.4 3.0 1 23 723 745 723 745 0.99 20 20 0.00018 0.015 16.5 4.3 1 23 751 774 751 774 0.97
Sequence Information
- Coding Sequence
- ATGAAAGAACGCCAGATAGCATCAAAAACAGAGTCAGCACTTACAAAATCCAAGGTAGTTGGAAAGAAAAATACTAACGCAGACATACTTCAATCGGAAACTGATGAAGAAAGTAGAtcaattaagaaaaagaatcaGAAGCAAAATGAGGAAGAATTGTTTAAACAACGTTATAATATTAGAGAGATTCTACTATGTAGTAATGCGACGCCGATTCGTAAGTATGACATTGGATATGTGTGCTGTTTCTGCCAGAAGCAATACCCTAATGCCGAAGAACTAAAGACACATACCATCACAGAACACGATGACAGTGATAAACTAGACTTTATGAAAGGACAGCGCTCGTTATACTTCTTAGTCAAGCTAGATATTACCGCAATGAAGTGTATCTTGTGCGACACAGGAATAGATTCAGTTGCAGACCTCATCCAACACCTGAGGAACGAACATGAAAAGCCTATGTTCACAGACATAAAGAATTATATCATACCATTCAAGTTCGAAGACTCTAAGACGCTTAAGTGCACCTTCTGCCCAAGAATATTCAACAGATTTAAGGTCTTGCAAGAGCACATGTACACACACTATAGAAACTTCGTTTGTGACGTCTGCGGCACTGGTTTCGTTAACGAGAAAATGCTTAACACACATCGTGACAGCCATAAAGTAGGAGTTTTCAAATGCGGACACTGTTCCGAAGAATTTGAGActcccagaaaaaaaaaataccatgaaAAGACTGTCCATTTGTTATCTTTAAACAAATGTGGGTATTGTGACGAAAAGTTTATGTGGTACCGTCAAAAATGTGCTCACTTAGCCGAAGCACATGGCATTGTTGTAACTCAACCAAAGGAATGCAAAGCGTGCGACAAAGTCTTCCCGTCTGATTCCAAACTTCAGCTGCACGTCAGGAGAGATCACTTGCTGGAACGTAGATTCAAATGTACCGAATGCGATATGGACTTCTTTTCCAAAGAGTCGTTGAACGATCACATGGTCAAACATACTGGGATCAAAAGGTTTTCTTGCAAGGTTTGCTGCAAGTCCTACGGGTTGAAGAAAGCTTTGAGAGAGCATATAAGGATACATGAGAACGATAGGAGGTTTAAATGCGAAACATGTGATCAGGCTTTCGTGCAAAAGTGTAGCTGGAAAGCGCATATGCGTTCTAAGCATGGTGTTCAACGTAACGTGAACGCCAAGATTGAAACCGATTGTGACAAAAAAGTGACTCGCAAATGTGCCCGAAGAAAACTCGAACAAGCTGGGGAGCTCAAAATTAATGAGTTAATAAAACAAAGGAGCAATATACGTCTTATCTTGGAATGTTCCAACGCGACTCCTATACGATGCAGAGGGGGCATCGGATATGCCTGCTGTTTTTGCGCACAAGAGTTCCCAGATCCTTCAGACTTAAAAAAACATACCCTAGAAGGTCACGACGATAAAACTAAACTCAAATTCATGATGGGCAAAATGATGTTCTCCTTCCTTGTCAAATTAGACATCACTGGGCTTACGTGTAAAATAtgcgaaaacaaaattaattcttTGGAACAACTTTTAGATCATTTGATCAAAACACACGATAGAAAAATTTACACTGACATCAAGAGCCACATAATGCCTTTTAAGTTCGATGATGATACACTAAGATGTATGTTTTGCCAAAACGTCTTCAACAAATTCAAGAACTTGCAACAACATATGAATATACATTGCAGAAATTATATTTGTGAATTTTGCGATGCAGGATtcataaataaacacattctAGCTTGCCACCAAGAAGGACATAAGATTGGTACATTCAAATGCGATTTATGTACGAAAGTTTTCGATACCCACAGGAAGAAGAAAAGTCACGAAAAATCCGTCCATGTCCACGCAAACTTGCTTAATAAGTGTGGATATTGTAATGAGAAGTTTACAAATTACAAAAGGAGAGATGATCACTTGGTGCAGGTTCATGGAGTTCAGCTTAAAGCTGTCCAATGCAACGCGTGTGACAAGACGTTCGATCACAAAGGCGCACTAACGATCCACACGAAACGAGATCACCTGATGGAGAGACGATACAAATGTCCGCAGTGCGACATGAAATTTTTCGGATCTAACGAATTGAAGCTCCATATGGTAAAACATACAGGGGTTAGGGAGTTTAAATGTACTGTGTGCTTTAAGACATATGGCCGGAAGAAAACGCTAAAAGAGCACATGAGAATACATAATGACGATAGGCGGTTTAAGTGCGAGCACTGCGGTCAAGCATTCGTGCAGAAATGCAGCTGGAAAGGGCACATGAGGAATAGGCACGGCGAACTGGTCTGA
- Protein Sequence
- MKERQIASKTESALTKSKVVGKKNTNADILQSETDEESRSIKKKNQKQNEEELFKQRYNIREILLCSNATPIRKYDIGYVCCFCQKQYPNAEELKTHTITEHDDSDKLDFMKGQRSLYFLVKLDITAMKCILCDTGIDSVADLIQHLRNEHEKPMFTDIKNYIIPFKFEDSKTLKCTFCPRIFNRFKVLQEHMYTHYRNFVCDVCGTGFVNEKMLNTHRDSHKVGVFKCGHCSEEFETPRKKKYHEKTVHLLSLNKCGYCDEKFMWYRQKCAHLAEAHGIVVTQPKECKACDKVFPSDSKLQLHVRRDHLLERRFKCTECDMDFFSKESLNDHMVKHTGIKRFSCKVCCKSYGLKKALREHIRIHENDRRFKCETCDQAFVQKCSWKAHMRSKHGVQRNVNAKIETDCDKKVTRKCARRKLEQAGELKINELIKQRSNIRLILECSNATPIRCRGGIGYACCFCAQEFPDPSDLKKHTLEGHDDKTKLKFMMGKMMFSFLVKLDITGLTCKICENKINSLEQLLDHLIKTHDRKIYTDIKSHIMPFKFDDDTLRCMFCQNVFNKFKNLQQHMNIHCRNYICEFCDAGFINKHILACHQEGHKIGTFKCDLCTKVFDTHRKKKSHEKSVHVHANLLNKCGYCNEKFTNYKRRDDHLVQVHGVQLKAVQCNACDKTFDHKGALTIHTKRDHLMERRYKCPQCDMKFFGSNELKLHMVKHTGVREFKCTVCFKTYGRKKTLKEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRNRHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01031364; iTF_01026623; iTF_00122662; iTF_01230893; iTF_00121686; iTF_01095176; iTF_00447482; iTF_00925054; iTF_01339269; iTF_01093367; iTF_01533273; iTF_01532346; iTF_01535159;
- 90% Identity
- iTF_01093367;
- 80% Identity
- -