Xxan066227.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xestia xanthographa
Gene Symbol
ZNF711
Assembly
GCA_905147715.1
Location
LR990671.1:8656476-8660111[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.022 4.4 9.9 0.5 1 23 85 108 85 108 0.93
2 20 0.099 20 7.9 0.1 2 23 135 157 134 157 0.96
3 20 0.0012 0.24 13.9 1.4 2 23 180 201 179 201 0.97
4 20 0.00069 0.14 14.7 0.1 1 23 205 227 205 227 0.95
5 20 0.085 17 8.1 2.9 1 23 232 255 232 255 0.97
6 20 6.6 1.3e+03 2.1 0.9 2 10 261 269 260 283 0.79
7 20 4.2e-05 0.0084 18.5 0.7 2 23 291 313 290 313 0.96
8 20 8.6e-05 0.017 17.5 1.1 1 23 319 341 319 341 0.98
9 20 0.0079 1.6 11.3 3.3 1 23 347 369 347 369 0.98
10 20 0.00011 0.022 17.1 2.1 1 23 375 398 375 398 0.98
11 20 0.33 66 6.2 0.2 1 23 463 486 463 486 0.91
12 20 6.7 1.3e+03 2.1 0.2 2 23 513 535 512 535 0.90
13 20 0.00056 0.11 15.0 1.8 2 23 558 579 557 579 0.97
14 20 0.92 1.8e+02 4.8 1.2 1 14 583 596 583 605 0.86
15 20 0.049 9.8 8.8 3.2 1 23 610 633 610 633 0.97
16 20 0.29 57 6.4 1.8 2 23 641 663 640 663 0.93
17 20 4.6e-05 0.0091 18.4 1.9 2 23 671 693 670 693 0.96
18 20 0.00032 0.064 15.7 0.8 1 23 699 721 699 721 0.98
19 20 2.7e-05 0.0053 19.1 1.2 1 23 727 749 727 749 0.99
20 20 4.8e-05 0.0096 18.3 4.5 1 23 755 778 755 778 0.98

Sequence Information

Coding Sequence
ATGAAGTTGCAATCCGAGATCAAAGAACGACAGATTGCTTCAAAAGCAGAAACAGCACGTACAATATCAAAGATAAttggaaagaaaaatattagcaAACGCAAACCTCAATCAAACTCTGATGAAGAAGGTagtaaaacaaagaaaaagaatCAAAAGCAAAACGAGGAGGAATTGTTTAAACAACGTTACAATATTAGAGAGATACTATTATGTAGCACTGCTACGCCCATTCGTAAGTATGATCTTGGATATGTGTGCTGTTTCTGTGATAACCAATATCCTAATCCCGAGGAACTAAAAACGCATACCATCGCAGAACACGATGACAGTGATAAACTGGACTTCATGAAAGGAAAGCGTGCCTTGTACTTCTTAGTCAAGCTAGACATAACCGATCTCAAGTGTACCTTGTGCGACACAGACGTAGATTCAGATGTAGACCTCATCCAACATCTGAGATACGAACATGAAAAACCAATGTTCACAGATTTAAAGAATTATATCTTACCGTTCAAGTTCGAAGACTCAACTCTCAAGTGCACCTTCTGCCCCCGAATATTCAACAGATTTAAAGTCCTGCAAGAGCACATGTACACTCACTATAGGAACTTTGTTTGTGACGTATGCGGCACTGGTTTTGTTAACGAGAAAATGCTTAACACACATAGTGACAGCCATAAAGTGGGAGTTTTCAGGTGCGGACACTGTTCCGAAGAGTTTGACACTCCCAGAAAAAAGAAATATCACGAAAAGACTGTTCACTTATTATCTTTAAACAAATGTGGGTATTGTGACGAAAAGTTCATGTGGTACAGACAAAAATGTGCACACTTAGCTGAAGTACATGGCATTGTTACTCAACCGAAGGAGTGTAAAGCGTGCGACAAAGTCTTCACGTCTGAGTCTAAACTTCAGCTTCATGTTAGGCGGGATCATTTGCTAGAACGTAGATTCAAATGTACTGAATGTGAAATGGAATTCTTTACCAAAGAGTCTCTAAACGACCACATGGTCAAACACACAGGAATCAAAATGTTTTCTTGCAAGGTTTGCTGCAAGTCCTACGGGTTGAAGAAAGCTTTGAGGCAGCACATGAGGATACATGACAATGATAGGAGATTTAAATGCGAGGTATGCGATCAGGCGTTCGTGCAAAAGTGCAGCTGGAAAGGGCATATGCGTTCTAAGCATGGTGTTCAACGTAACGTGAACGCCAAGATTGAAACGGATGGTTACAAAAAAGTGACTCGCAAATGTACCCGAAGAAAGCTCAAACAACCTGAGGAGCCCAAAATTAATGAGTTATTAAAACATAGAAGCAATATACGTCTTATATTACAATGTACCAACGCTACCCCTATACGATGCAGAGGGGGCATCGGATATGCCTGTTGTTTTTGCGCAGATGAGTTTCCAGATCCtgcagacttaaaaaaacatacTCTAGAAGGCCACGATGATAAAACTAAACTCAAATTCATGATTGGCAAAATGATGTTCTCATTCCTTGTCAAATTAGACATCACTGATCTTACGTGCAAAATATGCGAAGACAACATTCATACATTAGAAGATCTCATAGACCATCTAATCAAAATACACGATAAAAagatttacactgatattaagAGCCACATAATGCCTTTTAAGTTCGACAGCGATACACTAAAATGCATGGTTTGCCAAAATGCTTTCAACAAATTTAAGAACTTGCAACAACATATGAACACACATTACAGaaattttgtttgcgaacaTTGTGATGCtggatttataaataaacacattCTAGCATGTCACACCGAAGGGCATAAGACTGGTACATTCCAGTGTGATTTATGTGCGAAAGTATTTGATACCCATAGGAAGAAGAAAAGTCACGAAAAAACCGTTCACATCCATGCGAACTTGCTTAGTAAATGCGGATACTGTAGTCAGAAGTTTACGAATTACAAAAAAAGAGATGATCACTTACTTAAGGTCCATGGAGTTCAGATTAAAGCAGTCAAATGCAACGCGTGTGACAAGACTTTTGAACACAAAAGCGCGCTAACAATCCACACGAAACGAGATCACTTGATGGAGAGACGGTACAAATGTGGTCAGTGCGACATGAAATTTTACGGATCTAACGAATTAAAACTCCACATGGTAAAACATACAGGAGTGAGGGAGTTCAAATGCGCTGTCTGTTTAAAGTCATATGGGCGGAAGAAAACATTGAAAGAGCATATGAGGATCCATAATGATGATAGGCGGTTCAAGTGTGAGCACTGCGGTCAGGCATTCGTTCAGAAATGCAGCTGGAAAGGGCACATGAGAACTAGGCATGGCACGCTAGTCtga
Protein Sequence
MKLQSEIKERQIASKAETARTISKIIGKKNISKRKPQSNSDEEGSKTKKKNQKQNEEELFKQRYNIREILLCSTATPIRKYDLGYVCCFCDNQYPNPEELKTHTIAEHDDSDKLDFMKGKRALYFLVKLDITDLKCTLCDTDVDSDVDLIQHLRYEHEKPMFTDLKNYILPFKFEDSTLKCTFCPRIFNRFKVLQEHMYTHYRNFVCDVCGTGFVNEKMLNTHSDSHKVGVFRCGHCSEEFDTPRKKKYHEKTVHLLSLNKCGYCDEKFMWYRQKCAHLAEVHGIVTQPKECKACDKVFTSESKLQLHVRRDHLLERRFKCTECEMEFFTKESLNDHMVKHTGIKMFSCKVCCKSYGLKKALRQHMRIHDNDRRFKCEVCDQAFVQKCSWKGHMRSKHGVQRNVNAKIETDGYKKVTRKCTRRKLKQPEEPKINELLKHRSNIRLILQCTNATPIRCRGGIGYACCFCADEFPDPADLKKHTLEGHDDKTKLKFMIGKMMFSFLVKLDITDLTCKICEDNIHTLEDLIDHLIKIHDKKIYTDIKSHIMPFKFDSDTLKCMVCQNAFNKFKNLQQHMNTHYRNFVCEHCDAGFINKHILACHTEGHKTGTFQCDLCAKVFDTHRKKKSHEKTVHIHANLLSKCGYCSQKFTNYKKRDDHLLKVHGVQIKAVKCNACDKTFEHKSALTIHTKRDHLMERRYKCGQCDMKFYGSNELKLHMVKHTGVREFKCAVCLKSYGRKKTLKEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRTRHGTLV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00124504;
90% Identity
iTF_01533273; iTF_01532346;
80% Identity
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