Ostr033143.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- Znf711
- Assembly
- GCA_951800025.1
- Location
- OX637570.1:4553401-4557641[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0017 0.16 13.5 1.9 1 23 102 125 102 125 0.97 2 20 0.087 8.3 8.1 0.0 2 23 152 174 151 174 0.96 3 20 0.042 4 9.1 3.1 2 23 197 218 196 218 0.97 4 20 0.00026 0.025 16.0 0.5 1 23 222 244 222 244 0.97 5 20 0.018 1.7 10.3 2.2 1 23 249 272 249 272 0.97 6 20 6.9 6.6e+02 2.1 0.9 2 10 278 286 277 300 0.79 7 20 0.00045 0.043 15.3 0.4 2 23 309 331 308 331 0.96 8 20 5.3e-05 0.0051 18.2 0.8 1 23 337 359 337 359 0.98 9 20 0.018 1.7 10.3 2.2 1 23 365 387 365 387 0.98 10 20 0.00017 0.016 16.6 1.5 1 22 393 414 393 414 0.96 11 20 0.014 1.3 10.6 0.4 1 23 477 500 477 500 0.92 12 20 0.25 24 6.6 0.1 2 23 527 549 526 549 0.95 13 20 0.0027 0.26 12.8 2.0 2 23 572 593 571 593 0.96 14 20 4.4 4.2e+02 2.7 1.0 1 14 597 610 597 619 0.79 15 20 0.052 4.9 8.8 4.5 1 23 624 647 624 647 0.96 16 20 0.51 49 5.7 0.7 2 14 655 667 654 677 0.80 17 20 0.00012 0.011 17.1 1.3 2 23 685 707 684 707 0.96 18 20 0.0016 0.15 13.6 0.6 1 23 713 735 713 735 0.98 19 20 1.1e-05 0.0011 20.3 3.0 1 23 741 763 741 763 0.99 20 20 0.00019 0.018 16.5 4.3 1 23 769 792 769 792 0.97
Sequence Information
- Coding Sequence
- ATGAAGTCACGGGAAAAAGGTCGAAGTGAAGCGGCAGATCTTGCCAAGAAAATACTATCCGAGATGAAAGAACGCCAGGTTGCATCAAAAACAGAGACAGCACATACAAAATCAAAGGTAGTTGAAAAGAAAATTACTAACAAAGACATACTTCAATCGAAAactgatgaagaaaaaaaaggtagaaaaatgaagaaaaagaGTCAGAAGCAaaatgaggaagaattgtttaAACAACGTTATAATATTAGAGAGATTCTACTATGTAGCAATGCGACGCCGATTCGTAAATATGATATTGGATATGTGTGCTGTTTCTGTCAGAAGCAATACCCTAATGCCGAAGAACTAAAGACACATACCATTACACAACACGATGAGAGTGATAAACTAGACTTTATGAAAGGACAGCGCACATTGTACTTCTTAGTCAAGCTGGATATTACCGCACTGAAGTGTACCTTGTGCGACACAGGAATAGATTCAGTTGCAGACCTTATCCAACACCTGAGGAACGAACATGGAAAGCCAATGTTCACTGAAATCAAGAATTATATCATACCATTCAAGTTCGAAGACTCTACGCTTAAGTGCACCTTCTGCCCAAGAATATGCAACAGATTTAAGGTTCTGCAAGAGCACATGTACACACACTATAGAAACTTTGTTTGTGACGTATGCGGCACTGGTTTCGTTAACGAGAAAATGCTTAACACACATCATGATAGCCATAAAGTAGGCGTTTTCAAATGCGGTCACTGTCCTGAAGAATTTGACACTCCCAgaaaaaagaaataccatgAAAAGACTGTTCATTTGTTATCTTTGAACAAATGTGGGTATTGTGATGAAAAGTTTATGTGGTACCGTCAAAAATGTGCTCACTTAGCCGAAGTACATGGCATTGTTGTAACTCAACCAAAGGAATGCAAAGCGTGCGATAAAGTCTTTCCGTCTGATTCCAAACTTCAGCTCCACGTCAGGAGAGATCACTTGCTGGAACGTAGATTCAAGTGTACTGAATGTGATATGGAGTTCTTTTCCAAAGAGTTGTTGAACGATCACATGGTCAAACATACTGGAATCAAAAGGTTTTCTTGCAAGGTTTGCTGCAAGTCATACGGGTTGAAGAAAGCTTTAAGAGAGCATATAAGGATACATGAGAACGATAGGAGATTTAAATGCGAAACATGTGATCAGGCTTTCGTGCAAAAGTGCAGCTGGAAAACGCATATGCGTGTTCAACGTAACGTGAACGCCAAGATTGAAACCGATAGTGACAAAAGTGTGACTCACAAATGTGCCCGAAGAAAACTCGAACAAGCTGAGGAGCTCAAAATTAATgagttaataaaacaaaggaGCAATATACGTCTTATCTTGGAATGTTCCAACGCGACTCCTATACGATGCAGAGGTGGCATCGGATATGCCTGCTGTTTTTGCGCACAAGAGTTCCCAGATCCTACAGACTTAAAAAAACATACCCTAGCAGGTCACGACGATAAAACTAAACTCAAATTCATGATGGGCAAAATGATGTTCTCCTTCCTTGTCAAATTAGACATCACTGGTCTTACGTGTAAAATATGCGAAAACAAAGTTGATTCTTTAGAACAACTTGTAGATCATTTGATCAAAACACACGATAGAAAGATTTACACTGACATCAAGAGCCACATAATGCCTTTTAAGTTCGATGATGATACACTAAGATGTATGTTTTGCCAAAACGTCTTCAACAAATTCAAGAACTTGCAACAACATATGAATATACATTGCAGAAATTATATTTGTGAATTTTGTGATGCgggatttataaataaacacattcTAGCTTGCCACCAAGAAGGACATAAGACTGGTACATTCAAATGCGATTTATGTACGAAAGTTTTTGATACCCACAGGAAGAAGAAAAGTCACGAAAAATCCGTCCATATCCACGCAAACTTGCTTAATAAATGCGGGTACTGTAATGAGAAGTTTACGAATTACAAAAGGAGAGATGATCACTTGGTGCAAGTTCATGGAGTTCAGCTTAAAGCTGTCAAATGCAACGCGTGTGACAAGACGTTCGATCACAAAGGCGCCTTAACGATCCACACGAAACGAGATCACCTGATGGAGAGACGATACAAATGTGCGCAGTGCGATATGAATTTTTTCGGATCTAACGAATTAAAACTCCACATGGTAAAACATACAGGGGTAAGGGAGTTCAAATGTACTGTGTGCTTTAAGACATATGGCCGGAAGAAAACATTAAAAGAGCACATGAGAATACATAATGACGATAGGCGATTTAAGTGCGAGCACTGTGGCCAAGCATTCGTGCAGAAATGCAGCTGGAAAGGGCACATGCGGAATAGGCACGGCGAACTggtctga
- Protein Sequence
- MKSREKGRSEAADLAKKILSEMKERQVASKTETAHTKSKVVEKKITNKDILQSKTDEEKKGRKMKKKSQKQNEEELFKQRYNIREILLCSNATPIRKYDIGYVCCFCQKQYPNAEELKTHTITQHDESDKLDFMKGQRTLYFLVKLDITALKCTLCDTGIDSVADLIQHLRNEHGKPMFTEIKNYIIPFKFEDSTLKCTFCPRICNRFKVLQEHMYTHYRNFVCDVCGTGFVNEKMLNTHHDSHKVGVFKCGHCPEEFDTPRKKKYHEKTVHLLSLNKCGYCDEKFMWYRQKCAHLAEVHGIVVTQPKECKACDKVFPSDSKLQLHVRRDHLLERRFKCTECDMEFFSKELLNDHMVKHTGIKRFSCKVCCKSYGLKKALREHIRIHENDRRFKCETCDQAFVQKCSWKTHMRVQRNVNAKIETDSDKSVTHKCARRKLEQAEELKINELIKQRSNIRLILECSNATPIRCRGGIGYACCFCAQEFPDPTDLKKHTLAGHDDKTKLKFMMGKMMFSFLVKLDITGLTCKICENKVDSLEQLVDHLIKTHDRKIYTDIKSHIMPFKFDDDTLRCMFCQNVFNKFKNLQQHMNIHCRNYICEFCDAGFINKHILACHQEGHKTGTFKCDLCTKVFDTHRKKKSHEKSVHIHANLLNKCGYCNEKFTNYKRRDDHLVQVHGVQLKAVKCNACDKTFDHKGALTIHTKRDHLMERRYKCAQCDMNFFGSNELKLHMVKHTGVREFKCTVCFKTYGRKKTLKEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRNRHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00124504;
- 90% Identity
- iTF_01093367;
- 80% Identity
- -