Ofas031292.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- Znf711
- Assembly
- GCA_963082905.1
- Location
- OY720416.1:4869274-4873094[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0015 0.13 13.6 1.9 1 23 39 62 39 62 0.97 2 19 0.077 6.9 8.3 0.0 2 23 89 111 88 111 0.96 3 19 0.037 3.4 9.3 3.1 2 23 134 155 133 155 0.97 4 19 0.00023 0.021 16.2 0.5 1 23 159 181 159 181 0.97 5 19 0.016 1.4 10.4 2.2 1 23 186 209 186 209 0.97 6 19 6.1 5.5e+02 2.3 0.9 2 10 215 223 214 237 0.79 7 19 0.00012 0.011 17.1 0.4 2 23 246 268 245 268 0.96 8 19 5.1e-05 0.0046 18.3 1.0 1 23 274 296 274 296 0.98 9 19 0.016 1.4 10.4 2.2 1 23 302 324 302 324 0.98 10 19 0.012 1.1 10.8 0.4 1 23 399 422 399 422 0.92 11 19 0.22 20 6.8 0.1 2 23 449 471 448 471 0.95 12 19 0.0024 0.22 13.0 2.0 2 23 494 515 493 515 0.96 13 19 3.9 3.6e+02 2.9 1.0 1 14 519 532 519 541 0.79 14 19 0.046 4.1 9.0 4.5 1 23 546 569 546 569 0.96 15 19 0.45 41 5.8 0.7 2 14 577 589 576 599 0.80 16 19 0.00011 0.0096 17.3 1.3 2 23 607 629 606 629 0.96 17 19 0.0014 0.13 13.7 0.6 1 23 635 657 635 657 0.98 18 19 1e-05 0.0009 20.5 3.0 1 23 663 685 663 685 0.99 19 19 0.00017 0.015 16.6 4.3 1 23 691 714 691 714 0.97
Sequence Information
- Coding Sequence
- atgaagaaaaagagTCAGAAGCAAAATGAAGAAGAATTGTTTAAACAACGTTATAATATTAGAGAGATTCTACTATGTAGCAATGCGACGCCGATTCGTAAATATGATATTGGATATGTGTGCTGTTTCTGTCAGAAGCAATATCCTAATGCCGAAGAACTAAAGACACATACCATTACACAACACGATGAGAGTGATAAACTAGACTTCATGAAAGGACAGCGCACATTGTACTTCTTAGTCAAGCTAGATATTACCGCACTGAAGTGTACCTTGTGCGACACAGGAATAGATTCAGTTGCAGACCTTATCCAACACCTGAGGAACGAACATGGAAAGCCAATGTTCACTGAAATCAAGAATTATATCATACCATTCAAGTTCGAAGACTCTACGCTTAAGTGCACCTTCTGCCCAAGAATATGCAACAGATTTAAGGTTCTGCAAGAGCACATGTACACACACTATAGAAACTTTGTTTGTGACGTATGCGGCACTGGTTTCGTTAACGAGAAAATGCTTAACACACATCATGATAGCCATAAAGTAGGCGTTTTCAAATGCGGTCACTGTCCTGAAGAATTTGACACTCCCAGAAAAAAGAAATACCATGAAAAGACTGTTCATTTGTTATCTTTGAACAAATGTGGGTATTGTGATGAAAAGTTTATGTGGTACCGTCAAAAATGTGCTCACTTAGCCGAAGTACATGGCATTGTTGTAACTCAACCAAAGGAATGCAAAGCGTGCGATAAAGTCTTTCCGTCTGATTCCAAACTTCAGCTCCACATCAGGAGAGATCACTTGCTGGAACGTAGATTCAAATGTACTGAATGTGATATGGATTTCTTTTCCAAAGAGTCGTTGAACGATCACATGGTCAAACATACTGGAATCAAAAGGTTTTCTTGCAAGGTTTGCTGCAAGTCATACGGGTTGAAGAAAGCTTTAAGAGAGCATATAAGGATACATGAGAACGATAGGAGATTTAAATGCGAAACATGTGTTCAACGTAACGTGAACGCCAAGATTGAAACCGATAGTGACAAAAGTGTGACTCGCAAATGTGCCCGAAGAAAACTCGAACAAGCTGAGGAGCTCAAAATTAATGAGTTAATAAAACAAAGGAGCAATATACGTCTTATCTTGGAATGTTCCAACGCGACTCCTATACGATGCAGAGGTGGCATCGGATATGCCTGCTGTTTTTGCGCACAAGAGTTCCCAGATCCTACAGACTTAAAAAAACATACCCTAGCAGGTCACGACGATAAAACTAAACTCAAATTCATGATGGGCAAAATGATGTTCTCCTTCCTTGTCAAATTAGACATCACTGGTCTTACGTGTAAAATATGCGAAAACAAAGTTGATTCTTTAGAACAACTTGTAGATCATTTGATCAAAACACACGATAGAAAGATTTACACTACCATCAAGAGCCACATAATGCCTTTTAAGTTCGATGATGATACACTAAGATGTATGTTTTGCCAAAACGTCTTCAACAAATTCAAGAACTTGCAACAACATATGAATATACATTGCAGAAATTATATTTGTGAATTTTGTGATGCgggatttataaataaacacattctAGCTTGCCACCAAGAAGGACATAAGACTGGTACATTCAAATGCGATTTATGTACGAAAGTTTTTGATACCCACAGGAAGAAGAAAAGTCACGAAAAATCCGTCCATATCCACGCAAACTTGCTTAATAAATGCGGGTACTGTAATGAGAAGTTTACGAATTACAAAAGGAGAGATGATCACTTGGTGCAAGTTCATGGAGTTCAGCTTAAAGCTGTCAAATGCAACGCGTGTGACAAGACGTTCGATCACAAAGGCGCCTTAACGATCCACACGAAACGAGATCACCTGATGGAGAGACGATACAAATGTGCGCAGTGCGATATGAATTTTTTCGGATCTAACGAATTAAAACTCCACATGGTAAAACATACAGGGGTAAGGGAGTTCAAATGTACTGTGTGCTTTAAGACATATGGCCGGAAGAAAACATTAAAAGAGCACATGAGAATACATAATGACGATAGGCGATTTAAGTGCGAGCACTGTGGCCAAGCATTCGTGCAGAAATGCAGCTGGAAAGGGCACATGCGGAATAGGCACGGCGAACTggtctga
- Protein Sequence
- MKKKSQKQNEEELFKQRYNIREILLCSNATPIRKYDIGYVCCFCQKQYPNAEELKTHTITQHDESDKLDFMKGQRTLYFLVKLDITALKCTLCDTGIDSVADLIQHLRNEHGKPMFTEIKNYIIPFKFEDSTLKCTFCPRICNRFKVLQEHMYTHYRNFVCDVCGTGFVNEKMLNTHHDSHKVGVFKCGHCPEEFDTPRKKKYHEKTVHLLSLNKCGYCDEKFMWYRQKCAHLAEVHGIVVTQPKECKACDKVFPSDSKLQLHIRRDHLLERRFKCTECDMDFFSKESLNDHMVKHTGIKRFSCKVCCKSYGLKKALREHIRIHENDRRFKCETCVQRNVNAKIETDSDKSVTRKCARRKLEQAEELKINELIKQRSNIRLILECSNATPIRCRGGIGYACCFCAQEFPDPTDLKKHTLAGHDDKTKLKFMMGKMMFSFLVKLDITGLTCKICENKVDSLEQLVDHLIKTHDRKIYTTIKSHIMPFKFDDDTLRCMFCQNVFNKFKNLQQHMNIHCRNYICEFCDAGFINKHILACHQEGHKTGTFKCDLCTKVFDTHRKKKSHEKSVHIHANLLNKCGYCNEKFTNYKRRDDHLVQVHGVQLKAVKCNACDKTFDHKGALTIHTKRDHLMERRYKCAQCDMNFFGSNELKLHMVKHTGVREFKCTVCFKTYGRKKTLKEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRNRHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00124504;
- 90% Identity
- iTF_01095176; iTF_00925054; iTF_00124504; iTF_01339269; iTF_00121686; iTF_00122662;
- 80% Identity
- -