Aste004248.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- -
- Assembly
- GCA_013141755.1
- Location
- CM023249.1:40094366-40099914[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.2e-12 1.6e-08 33.9 0.0 2 39 566 604 565 608 0.90 2 4 3e-12 5e-09 35.5 0.1 2 39 620 657 619 660 0.94 3 4 4.5e-18 7.7e-15 54.1 0.0 3 45 676 719 674 719 0.97 4 4 3.1e-17 5.2e-14 51.4 0.0 1 43 726 769 726 770 0.96
Sequence Information
- Coding Sequence
- ATGGTGTATATGAGTTTATTGCGGACAGCGGAGCAGCTAAAAATTAAGGGCCTGTGTGAGGTTGGCGAACCACAGTACGAGCAGGATTACTCGCCAGCGCTGAAACGCTACAAACCGTACCGGTCACGATCGCCACCGGACAaccgccaccagcaccatcaccaccagcaaccgccgccaccaccaccaccaccgtccggCTCATCAGGCGGCGGTACCACGAGTAGCGGTGGCCGTTCCGGTTCCGCAGGAGGTGGAGGAGGATCACACGGGAGTGGTAGCAGtgggaacaacaacaataacagtTCGTCTTCCTCCCAATCGACGGGATACAGTGAGAACGGCAAGGGCTGTAGTACGGGCAAAGGAGgaagcggcggcggcggcggcggcggaggAGGAGGCTTAGGACCTGGGACAGGGCGCGGCCTTTATCATCCTtcccagcatcatcacccgctacaccaccaccaccaccatcatccgcaCCTGCATCATCATCTGCATCATCCAGGTGACCGTAGAACGCCTGGCGGCCATCTTATCGACGAGGACGATGATGGATCACCGTCCTCGGTGCTAGTGGTGGAAACGCACGATCTAAGCACATCCGCCTCGAAGGATAAGCattatcagcagcagcagcagcagcaacagcaccaccatcatcatcatccgcatcatccccatcatcagccctcacagcagcagcatcccctTGGAAGCAAAATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGAGTTCCGATGGGATATTTGGATTTTGCACCAGAGCCTCCGGCACCGACGGCGACACCAGTGACAGAGCATGTGGACATAAATTGTGCGCCCAGTAGCCACGATACACGTGACCTGTCCAGTAAGTATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCGCTAGATCCTCCCAATGCGGTTCAACTGGACAATCACGCTGTcagccatcagcagcagctccatcagcatcagcaacagcaggcgcaacagcaacagctcctgcagcaacagcatttactacagcagcaacagcaggcacagcagcaggcccaacagcagcagcagcagcagcagcagcaaagacaGACACCTCAGCCACCGGGAGctccgcaacagcagcaaaacgaCCATCAGCGGCACTCGCCACCGCatatgcagcagcaacagcacgtGATGCTGATggatcaacagcagcagcaccacccaACCACACACAGTCCGGCGTCCAGtgtgtcgtcatcgtcgtccagCCAGCATCCGGAGAATCTAGTGACTGGCAGCGGTGCGGCAGGCTCTGTAACGCCGggcccagccaccaacagcagcaatggTAATGCACCGGCAGGCGGCGAAGAGATGAAACCCAGACTGAATCTGAAGCAGGAAAACCTGAGCGATGGTGGTGCCGACCAGCAACATCAGACGATGGAGGTCGAGCCGGACCAATCGTCGATGCACGGCATGGTGGTGACACCGGAAATATCGGGCATCATGAACCAGAGTCAAATGAGCGATATGTATCAGTCGGATGCTAGCGAAGACTCGAAAGTAGGCATTTTGGATGGATCCTCGATGCAGTACACCAACTTGACTAGCCCGAACGAAGCCAAGACGCCAACCGGGCCGAAAACGTGGACTGCCGAAGACATGGAATCGGCCCTAGAAGCGCTACGCTCTCACAACATGAGCTTGACAAAGGCATCTGCTACGTACGGTATTCCCTCGACGACGCTGTGGCAACGTGCGCATCGGCTCGGTATCGATACGCCGAAGAAGGAGGGTCCGTCTAAAACGTGGAACGAAGATTCGCTCAACAGCGCACTGGAAGCGCTGCGGACGGGCACGATCTCGGCCAACAAAGCCTCCAAGGCGTTCGGCATCCCGTCGTCCACGCTGTACAAGATAGCGCGCCGGGAAGGCATCCGTCTGGCGGCTCCATTCAACGCTGCACCCACTACCTGGTCCGCGGAGGATCTGGACCGTGCCTTGGAAGCGATCCGTGCGGGGCAAACGTCGGTGCAGAAGGCGAGCACCGAGTTTGGCATCCCGACCGGTACGCTGTACGGGCGGTGCAAGCGCGAAGGCATCGAGCTGTCCCGTTCCAATCCGACGCCCTGGTCTGAAGATGCGATGATGGAGGCCTTGGAGTCCGTCAAACAAGGACACATGTCGATCAATCAAGCCGCCATCCACTACAACCTACCGTACAGCTCACTGTACGGTCGGTTCAAACGGGGCAAGTACGACACGCCCAGCTCGggaggcggcggcggcggtggcagtgcgtccaatgctgctgctgctgctgctgctgctaccggtgGTGGCGGCACGGGCAGTGGCGGCAGTAACGGTGGCGCCAGCAACGCCACCAGCGGTGCCGGTACAGGTGGCAGTAATGTTGGCGGTAGTCCCCAGATGGAGTTTAAGATAGAACCACAGCATAACGATCATAGTCCAGAGAATACGCAACATTACAATCCTGCACTATCGGCATCCTCGACGCCTACAAGTAACACACcgacgcagcagcagcaacagcagcagcagcagcagcagcaacagcagcaacagcaacagcagcagcaacttaCCCACCATTTAGTGCAACAGTCTCCATCAGTGCTACCGGTCAGCATCCACATCGTCGATGCtgcccatcatcatcttccgcATCCGCATCAGCAgctgcaccaccagcagcagcaacagcagcagctcgggCAGCCGCAGCACGTGGTGGTGgcgcagcatcagcagcagcagcagcaccatcatctgCATCACCAGCCGCAGCTAATACAGCATCACATCATTCCGCAGCAGCATCACATCATCTATCAGCAGCCGCTGCAACCGatccagcagcaaccgcagtATCATCCGATGTATCACATCATCAAGCAGGAAAATGATAGAAGTTGA
- Protein Sequence
- MVYMSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPPSGSSGGGTTSSGGRSGSAGGGGGSHGSGSSGNNNNNSSSSSQSTGYSENGKGCSTGKGGSGGGGGGGGGGLGPGTGRGLYHPSQHHHPLHHHHHHHPHLHHHLHHPGDRRTPGGHLIDEDDDGSPSSVLVVETHDLSTSASKDKHYQQQQQQQQHHHHHHPHHPHHQPSQQQHPLGSKMASLGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSSKYSVPNDGDLRVKFETLRSLDPPNAVQLDNHAVSHQQQLHQHQQQQAQQQQLLQQQHLLQQQQQAQQQAQQQQQQQQQQRQTPQPPGAPQQQQNDHQRHSPPHMQQQQHVMLMDQQQQHHPTTHSPASSVSSSSSSQHPENLVTGSGAAGSVTPGPATNSSNGNAPAGGEEMKPRLNLKQENLSDGGADQQHQTMEVEPDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGSASNAAAAAAAATGGGGTGSGGSNGGASNATSGAGTGGSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQLTHHLVQQSPSVLPVSIHIVDAAHHHLPHPHQQLHHQQQQQQQLGQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099750; iTF_00099587; iTF_00101769; iTF_00101605; iTF_00093548; iTF_00093383; iTF_00103598; iTF_00105234; iTF_00105065; iTF_00099093; iTF_00098930; iTF_00102454; iTF_00102290;
- 90% Identity
- iTF_00101769;
- 80% Identity
- -