Agam008086.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- bab2
- Assembly
- GCF_000005575.2
- Location
- NT:12782149-12840793[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.5e-12 1.5e-08 33.7 0.0 2 39 698 736 697 740 0.90 2 4 3.1e-12 4.8e-09 35.3 0.1 2 39 752 789 751 792 0.94 3 4 4.7e-18 7.3e-15 53.9 0.0 3 45 808 851 806 851 0.97 4 4 3.2e-17 5e-14 51.2 0.0 1 43 858 901 858 902 0.96
Sequence Information
- Coding Sequence
- ATGGATACCAAAGCAGCATCAGCGGGACCCGCCCCGACGCATTTACCTTCGTCCACATATCCAGCGACGTCACCGTACTCGAAGGGTGCCCGGTCGTCGCACCAGTATTTTAGTCTAAGATGGAACAACTACCAGTCAAACATGACGTCCGTGTTCCACGAGCTGCTCGAGTCACAATCCTTCGTCGATGTTACGCTAGCCTGCGAATACAACTCACTAAAGGCGCACAAGGTGGTTCTGTCGGCGTGTTCGGCGTACTTTCAAAAAATTCTCCTGGACAACCCGTGCAAGCATCCGACCATCATACTGCCGGCCGATATATGCTTTTCCGATCTGCAGTTCATCATCGAGTTCGTGTACCGCGGGGAAATCGATGTATCCGAGGCAGAGCTGCAGAGCTTGTTACGGACAGCGGAGCAGCTGAAAATTAAAGGCCTGTGCGAGGTAGGCGAACCACAGTACGAGCAGGACTACTCGCCCGCACTAAAGCGCTACAAACCGTACCGGTCACGGTCGCCCCCGGACAACCGGcatcagcaccatcaccaccagcaaccaccgcccccaccaccaccctccggTGCGTCGGGATCGACCAGTGGTGGCCGATCCGGTTCGTCcgcagcaggagcaggaggatCACACGGCAGCGGTGGCAGCAGtggcggcaacagcagcaacaacaacaacaacaacagttcGTCTTCCTCCCAGTCGACGGGATACAGCGAGAACGGTAAAGGCTGCAGTACCGGCAAGGGCGGCAGTGGCGGAGGTAGCGGCGGTCTAGGATCTGGGGCAGGGCGCACCCTTTACCATCCCTCACAGCACCATCACCCGCTGCACCATCATctgcatcatcatccgcaCCACCATCTGCATCATCTGCACCATCCCCCGCCACTTGGCGGTGACCCGCGGACGACGACCACCCCTGGCCATATTGTcgaggacgacgatgatggATCGGTGCTAGTGGTCGAAACGCACGATCTGACTACGACGGGATCGAAGGATAAGCattatcagcagcagcagcagcagcaacaccatcaATCGCAGCAAGCGCACCACCATCCTCACCcgcatcatcctcatcatccgCAGCAGCATCCACTCGGTAGCAAAATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGCGTACCGATGGGATATTTGGACTTTGCACCAGAGCCTCCAGCACCGACGGCGACGCCAGTGACAGAGCATGTGGACATTAATTGTGCGCCTAGCAGCCACGATACACGTGATCTGTCCAATTCTGTGCCAAACGATGGTGACTTACGAGTGAAATTCGAAACGTTACGTTCGCTAGATCCTCCGAATGCGGTGCAACTGGACAATCACACAGTcagccatcagcagcagctccaccatcagcaacagcaggcgCAACAGCAGGCGCAACagcaggcgcagcagcagcagctcctgcagcaacaacagcatttactgcaacagcagcagcaacagcagcagcagcagcaaagacaGACACCGCAGCCAGCGGGTgctcaacagcagcagaatgaCCATCAGCGGCACTCGCCGCCgcacatgcagcagcagcagcaacaaccacagcagCACGTAATGCTGATggatcaacagcagcagcagcaccacccaACCACCCATAGTCCGGCGTCAAGTgtgtcgtcgtcatcgtccaGCCAGCATCCGGAGAACTTGGTTACTGGCAGCGGTGGGGCTGCCGGCTCGGTGACGCCTGGTCCGCCCACCAACAATAGCAACGGCAACGGAGCGGGCGCAGATGAGCTGAAGCCGAGACTGAACCTGAAGCAGGAAAACATCAGCgatgagcagcagcatcaaacgATGGAGGTCGAGCAAGACCAGTCCTCGATGCACGGCATGGTGGTAACGCCGGAAATTTCGGGCATCATGAACCAGAGCCAAATGAGCGATATGTACCAGTCGGATGCTAGCGAGGACTCGAAGGTGGGCATTCTGGACGGTTCGTCGATGCAGTACACCAATCTGACCAGCCCCAACGAAGCGAAAACGCCTACCGGACCGAAAACATGGACCGCGGAAGATATGGAGTCGGCGCTCGAAGCGCTACGCTCTCACAACATGAGCTTGACTAAGGCCTCTGCTACGTACGGTATTCCATCGACGACACTGTGGCAGCGGGCGCACCGGCTCGGCATCGATACACCGAAAAAGGAGGGTCCGTCCAAGACGTGGAACGAGGACTCGCTCAACAGCGCACTGGAAGCGCTACGGACGGGCACGATCTCCGCCAACAAGGCCTCGAAAGCGTTCGGCATACCGTCGTCGACGCTGTACAAGATTGCGCGCCGCGAAGGCATCCGCCTGGCGGCGCCGTTCAATGCCGCACCCACCACCTGGTCCGCGGAAGATTTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAGACCTCCGTGCAGAAGGCCAGCACCGAGTTCGGCATTCCCACTGGCACACTGTACGGGCGCTGCAAGCGCGAGGGCATCGAGCTGTCCCGATCGAATCCCACTCCCTGGTCCGAAGACGCGATGATGGAAGCGTTGGAATCTGTCAAGCAAGGACACATGTCCATCAATCAAGCCGCCATCCACTATAACCTACCGTACAGCTCACTGTACGGCCGGTTCAAGCGCGGCAAGTACGATACGCCCAGCTCgggaggcggcggcggtggcagttcgtccaatgctgctgctgctgctgctaccggtGGAGGCGGCGCGGGCAGCGGTGGCGGTAGTGGCGCCGGCAGCGCCGCTAGTGCCGGAACAGGTGGCAATAATGTTGGCAGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGCAACATTACAATCCTGCACTATCGGCTTCCTCGACGCCTACAAGTAATACGCcaactcagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcagcagcaacaacttACTCACCATTTAGTTCAACAGCCCCCGTCGGTGCTACCGGTCAGCATTCACATTGTCGATGCGGCCGCCCATCACCACCTTGCACATCCGCATCAGCAGctgcaccatcagcagcagcagctggcacAGCCGCAGCATGTGGTGGTagcgcagcaccagcagcagcagcagcatcaccatctGCACCATCAGCCGCAGCTAATACAGCATCACATCATTCCGCAGCAACATCATATAATATATCAGCAGCCGCTGCAACcgatccagcagcagccacagtaCCATCCGATGTACCACATCATCAAGCAGGAGAACGACAGAAGTTGA
- Protein Sequence
- MDTKAASAGPAPTHLPSSTYPATSPYSKGARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPSGASGSTSGGRSGSSAAGAGGSHGSGGSSGGNSSNNNNNNSSSSSQSTGYSENGKGCSTGKGGSGGGSGGLGSGAGRTLYHPSQHHHPLHHHLHHHPHHHLHHLHHPPPLGGDPRTTTTPGHIVEDDDDGSVLVVETHDLTTTGSKDKHYQQQQQQQHHQSQQAHHHPHPHHPHHPQQHPLGSKMASLGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNSVPNDGDLRVKFETLRSLDPPNAVQLDNHTVSHQQQLHHQQQQAQQQAQQQAQQQQLLQQQQHLLQQQQQQQQQQQRQTPQPAGAQQQQNDHQRHSPPHMQQQQQQPQQHVMLMDQQQQQHHPTTHSPASSVSSSSSSQHPENLVTGSGGAAGSVTPGPPTNNSNGNGAGADELKPRLNLKQENISDEQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGSSSNAAAAAATGGGGAGSGGGSGAGSAASAGTGGNNVGSSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLTHHLVQQPPSVLPVSIHIVDAAAHHHLAHPHQQLHHQQQQLAQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108305;
- 90% Identity
- iTF_00102454;
- 80% Identity
- iTF_00102454;